RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 RTEL1Q9NZ71 1219 aa14.69□□□□□ -0.06
CDT1-203ENST00000569140 PCDHA6Q9UN73 950 aa14.69□□□□□ -0.06
CDT1-203ENST00000569140 PCDHA8Q9Y5H6 950 aa14.69□□□□□ -0.06
CDT1-203ENST00000569140 MRVI1Q9Y6F6 885 aa14.69□□□□□ -0.06
CDT1-203ENST00000569140 MYADML2A6NDP7 307 aa14.68□□□□□ -0.06
CDT1-203ENST00000569140 FOSBP53539 338 aa14.68□□□□□ -0.06
CDT1-203ENST00000569140 ATN1P54259 1190 aaPredicted RBP14.68□□□□□ -0.06
CDT1-203ENST00000569140 IRX5P78411 483 aaPredicted RBP14.68□□□□□ -0.06
CDT1-203ENST00000569140 BEX3Q00994 111 aa14.68□□□□□ -0.06
CDT1-203ENST00000569140 DUSP28Q4G0W2 176 aa14.68□□□□□ -0.06
CDT1-203ENST00000569140 GNASQ5JWF2 1037 aa14.68□□□□□ -0.06
CDT1-203ENST00000569140 JAKMIP3Q5VZ66 844 aa14.68□□□□□ -0.06
CDT1-203ENST00000569140 CCDC83Q8IWF9 413 aa14.68□□□□□ -0.06
CDT1-203ENST00000569140 COPS5Q92905 334 aa14.68□□□□□ -0.06
CDT1-203ENST00000569140 VTI1AQ96AJ9 217 aa14.68□□□□□ -0.06
CDT1-203ENST00000569140 AIFM3Q96NN9 605 aa14.68□□□□□ -0.06
CDT1-203ENST00000569140 GLT8D2Q9H1C3 349 aa14.68□□□□□ -0.06
CDT1-203ENST00000569140 ORC3Q9UBD5 711 aaPredicted RBP14.68□□□□□ -0.06
CDT1-203ENST00000569140 BRCA2P51587 3418 aa14.67□□□□□ -0.06
CDT1-203ENST00000569140 ADAMTS4O75173 837 aa14.67□□□□□ -0.06
CDT1-203ENST00000569140 GNA11P29992 359 aa14.67□□□□□ -0.06
CDT1-203ENST00000569140 MNX1P50219 401 aaPredicted RBP14.67□□□□□ -0.06
CDT1-203ENST00000569140 GJA9P57773 515 aa14.67□□□□□ -0.06
CDT1-203ENST00000569140 LY6KQ17RY6 165 aa14.67□□□□□ -0.06
CDT1-203ENST00000569140 GNPTABQ3T906 1256 aa14.67□□□□□ -0.06
CDT1-203ENST00000569140 REXO1Q8N1G1 1221 aaKnown RBP14.67□□□□□ -0.06
CDT1-203ENST00000569140 ANO3Q9BYT9 981 aa14.67□□□□□ -0.06
CDT1-203ENST00000569140 GNEQ9Y223 722 aaKnown RBP14.67□□□□□ -0.06
CDT1-203ENST00000569140 FRMPD4Q14CM0 1322 aa14.66□□□□□ -0.06
CDT1-203ENST00000569140 RBM47A0AV96 593 aaKnown RBP14.66□□□□□ -0.06
CDT1-203ENST00000569140 NKRFO15226 690 aaKnown RBP eCLIP14.66□□□□□ -0.06
CDT1-203ENST00000569140 ZEB2O60315 1214 aa14.66□□□□□ -0.06
CDT1-203ENST00000569140 EVI5O60447 810 aa14.66□□□□□ -0.06
CDT1-203ENST00000569140 ARIH2O95376 493 aa14.66□□□□□ -0.06
CDT1-203ENST00000569140 FOSP01100 380 aaPredicted RBP14.66□□□□□ -0.06
CDT1-203ENST00000569140 XBP1P17861 261 aa14.66□□□□□ -0.06
CDT1-203ENST00000569140 AP3B2Q13367 1082 aa14.66□□□□□ -0.06
CDT1-203ENST00000569140 KCNA10Q16322 511 aa14.66□□□□□ -0.06
CDT1-203ENST00000569140 FSCN1Q16658 493 aaKnown RBP14.66□□□□□ -0.06
CDT1-203ENST00000569140 BRDTQ58F21 947 aaPredicted RBP14.66□□□□□ -0.06
CDT1-203ENST00000569140 PCNX4Q63HM2 1172 aa14.66□□□□□ -0.06
CDT1-203ENST00000569140 UBE2Q1Q7Z7E8 422 aa14.66□□□□□ -0.06
CDT1-203ENST00000569140 NLRX1Q86UT6 975 aa14.66□□□□□ -0.06
CDT1-203ENST00000569140 VSIG10LQ86VR7 867 aa14.66□□□□□ -0.06
CDT1-203ENST00000569140 C7orf61Q8IZ16 206 aa14.66□□□□□ -0.06
CDT1-203ENST00000569140 PCSK9Q8NBP7 692 aaKnown RBP14.66□□□□□ -0.06
CDT1-203ENST00000569140 BICD2Q8TD16 824 aa14.66□□□□□ -0.06
CDT1-203ENST00000569140 WASF1Q92558 559 aa14.66□□□□□ -0.06
CDT1-203ENST00000569140 ZSCAN31Q96LW9 406 aaPredicted RBP14.66□□□□□ -0.06
CDT1-203ENST00000569140 UPF3AQ9H1J1 476 aaKnown RBP14.66□□□□□ -0.06
CDT1-203ENST00000569140 STK36Q9NRP7 1315 aa14.66□□□□□ -0.06
CDT1-203ENST00000569140 KIAA1217Q5T5P2 1943 aa14.65□□□□□ -0.06
CDT1-203ENST00000569140 A0A1W2PQ45 241 aaPredicted RBP14.65□□□□□ -0.06
CDT1-203ENST00000569140 A0A1W2PQY0 241 aa14.65□□□□□ -0.06
CDT1-203ENST00000569140 ESYT2A0FGR8 921 aa14.65□□□□□ -0.06
CDT1-203ENST00000569140 CTDNEP1O95476 244 aa14.65□□□□□ -0.06
CDT1-203ENST00000569140 GH1P01241 217 aa14.65□□□□□ -0.06
CDT1-203ENST00000569140 MYL3P08590 195 aa14.65□□□□□ -0.06
CDT1-203ENST00000569140 ZNF76P36508 570 aa14.65□□□□□ -0.06
CDT1-203ENST00000569140 CPT1AP50416 773 aa14.65□□□□□ -0.06
CDT1-203ENST00000569140 ACLYP53396 1101 aa14.65□□□□□ -0.06
CDT1-203ENST00000569140 CHMP4BP1P59074 171 aa14.65□□□□□ -0.06
CDT1-203ENST00000569140 RASGRP4Q8TDF6 673 aa14.65□□□□□ -0.06
CDT1-203ENST00000569140 ALG1Q9BT22 464 aa14.65□□□□□ -0.06
CDT1-203ENST00000569140 ZMYND12Q9H0C1 365 aa14.65□□□□□ -0.06
CDT1-203ENST00000569140 SH3GLB2Q9NR46 395 aa14.65□□□□□ -0.06
CDT1-203ENST00000569140 SH2B1Q9NRF2 756 aaPredicted RBP14.65□□□□□ -0.06
CDT1-203ENST00000569140 PKD2L1Q9P0L9 805 aa14.65□□□□□ -0.06
CDT1-203ENST00000569140 MOXD2PA6NHM9 499 aa14.64□□□□□ -0.07
CDT1-203ENST00000569140 JAK2O60674 1132 aa14.64□□□□□ -0.07
CDT1-203ENST00000569140 STAM2O75886 525 aa14.64□□□□□ -0.07
CDT1-203ENST00000569140 ASGR1P07306 291 aa14.64□□□□□ -0.07
CDT1-203ENST00000569140 COL6A1P12109 1028 aa14.64□□□□□ -0.07
CDT1-203ENST00000569140 CST5P28325 142 aaPredicted RBP14.64□□□□□ -0.07
CDT1-203ENST00000569140 MRPS9P82933 396 aaKnown RBP14.64□□□□□ -0.07
CDT1-203ENST00000569140 XRRA1Q6P2D8 792 aa14.64□□□□□ -0.07
CDT1-203ENST00000569140 KCNV1Q6PIU1 500 aa14.64□□□□□ -0.07
CDT1-203ENST00000569140 DHX37Q8IY37 1157 aaKnown RBP14.64□□□□□ -0.07
CDT1-203ENST00000569140 NSUN7Q8NE18 718 aaKnown RBP14.64□□□□□ -0.07
CDT1-203ENST00000569140 KLHDC9Q8NEP7 349 aa14.64□□□□□ -0.07
CDT1-203ENST00000569140 GLT1D1Q96MS3 346 aa14.64□□□□□ -0.07
CDT1-203ENST00000569140 TSEN34Q9BSV6 310 aaKnown RBP14.64□□□□□ -0.07
CDT1-203ENST00000569140 STARD7Q9NQZ5 370 aa14.64□□□□□ -0.07
CDT1-203ENST00000569140 KCNJ14Q9UNX9 436 aa14.64□□□□□ -0.07
CDT1-203ENST00000569140 PHF24Q9UPV7 400 aa14.64□□□□□ -0.07
CDT1-203ENST00000569140 ATP11BQ9Y2G3 1177 aa14.64□□□□□ -0.07
CDT1-203ENST00000569140 Q9Y3F1 56 aa14.64□□□□□ -0.07
CDT1-203ENST00000569140 FIBPO43427 364 aa14.63□□□□□ -0.07
CDT1-203ENST00000569140 RGS20O76081 388 aa14.63□□□□□ -0.07
CDT1-203ENST00000569140 GGPS1O95749 300 aa14.63□□□□□ -0.07
CDT1-203ENST00000569140 CLK2P49760 499 aaKnown RBP14.63□□□□□ -0.07
CDT1-203ENST00000569140 SP4Q02446 784 aa14.63□□□□□ -0.07
CDT1-203ENST00000569140 TRIM29Q14134 588 aa14.63□□□□□ -0.07
CDT1-203ENST00000569140 LRRC26Q2I0M4 334 aa14.63□□□□□ -0.07
CDT1-203ENST00000569140 CXCL17Q6UXB2 119 aa14.63□□□□□ -0.07
CDT1-203ENST00000569140 MLXIPQ9HAP2 919 aa14.63□□□□□ -0.07
CDT1-203ENST00000569140 DDX41Q9UJV9 622 aaKnown RBP14.63□□□□□ -0.07
CDT1-203ENST00000569140 PCDHA4Q9UN74 947 aa14.63□□□□□ -0.07
CDT1-203ENST00000569140 ADAMTS3O15072 1205 aa14.62□□□□□ -0.07
CDT1-203ENST00000569140 UBA1P22314 1058 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms