RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 EPHB4P54760 987 aa29.21■■■□□ 2.27
CCNF-205ENST00000569093 TMTC3Q6ZXV5 915 aa29.21■■■□□ 2.27
CCNF-205ENST00000569093 VSIG10LQ86VR7 867 aa29.21■■■□□ 2.27
CCNF-205ENST00000569093 PPP1R13LQ8WUF5 828 aa29.21■■■□□ 2.27
CCNF-205ENST00000569093 TRPV6Q9H1D0 765 aa29.21■■■□□ 2.27
CCNF-205ENST00000569093 DDX41Q9UJV9 622 aaKnown RBP29.21■■■□□ 2.27
CCNF-205ENST00000569093 RGS20O76081 388 aa29.2■■■□□ 2.26
CCNF-205ENST00000569093 ARHGAP1Q07960 439 aa29.2■■■□□ 2.26
CCNF-205ENST00000569093 AFG1LQ8WV93 481 aa29.2■■■□□ 2.26
CCNF-205ENST00000569093 MTG1Q9BT17 334 aaPredicted RBP29.2■■■□□ 2.26
CCNF-205ENST00000569093 GH1P01241 217 aa29.19■■■□□ 2.26
CCNF-205ENST00000569093 BRDTQ58F21 947 aaPredicted RBP29.19■■■□□ 2.26
CCNF-205ENST00000569093 USP17L6PQ6QN14 398 aa29.19■■■□□ 2.26
CCNF-205ENST00000569093 JAKMIP1Q96N16 626 aaKnown RBP29.19■■■□□ 2.26
CCNF-205ENST00000569093 PPP1R12CQ9BZL4 782 aa29.19■■■□□ 2.26
CCNF-205ENST00000569093 MRVI1Q9Y6F6 885 aa29.19■■■□□ 2.26
CCNF-205ENST00000569093 MYH7BA7E2Y1 1941 aa29.18■■■□□ 2.26
CCNF-205ENST00000569093 HMGB1P09429 215 aaKnown RBP29.18■■■□□ 2.26
CCNF-205ENST00000569093 FPGSQ05932 587 aa29.18■■■□□ 2.26
CCNF-205ENST00000569093 KLF18A0A0U1RQI7 1052 aa29.17■■■□□ 2.26
CCNF-205ENST00000569093 ZBTB43O43298 467 aa29.17■■■□□ 2.26
CCNF-205ENST00000569093 B4GALT4O60513 344 aa29.17■■■□□ 2.26
CCNF-205ENST00000569093 REC8O95072 547 aa29.17■■■□□ 2.26
CCNF-205ENST00000569093 ERICH6BQ5W0A0 696 aa29.17■■■□□ 2.26
CCNF-205ENST00000569093 LAMA2P24043 3122 aaKnown RBP29.17■■■□□ 2.26
CCNF-205ENST00000569093 MEIS2O14770 477 aa29.16■■■□□ 2.26
CCNF-205ENST00000569093 KPNA6O60684 536 aa29.16■■■□□ 2.26
CCNF-205ENST00000569093 CCND2P30279 289 aa29.16■■■□□ 2.26
CCNF-205ENST00000569093 NBPF20Q3BBV1 942 aa29.16■■■□□ 2.26
CCNF-205ENST00000569093 MFSD5Q6N075 450 aa29.16■■■□□ 2.26
CCNF-205ENST00000569093 SMARCC2Q8TAQ2 1214 aa29.16■■■□□ 2.26
CCNF-205ENST00000569093 SEZ6LQ9BYH1 1024 aa29.16■■■□□ 2.26
CCNF-205ENST00000569093 ALDH8A1Q9H2A2 487 aaPredicted RBP29.16■■■□□ 2.26
CCNF-205ENST00000569093 SCN10AQ9Y5Y9 1956 aa29.15■■■□□ 2.26
CCNF-205ENST00000569093 SORBS3O60504 671 aa29.15■■■□□ 2.26
CCNF-205ENST00000569093 MMP3P08254 477 aa29.15■■■□□ 2.26
CCNF-205ENST00000569093 RTN1Q16799 776 aa29.15■■■□□ 2.26
CCNF-205ENST00000569093 Q6ZUG5 572 aa29.15■■■□□ 2.26
CCNF-205ENST00000569093 GPKOWQ92917 476 aaPredicted RBP eCLIP29.15■■■□□ 2.26
CCNF-205ENST00000569093 RBM28Q9NW13 759 aaKnown RBP29.15■■■□□ 2.26
CCNF-205ENST00000569093 NAP1L2Q9ULW6 460 aaPredicted RBP29.15■■■□□ 2.26
CCNF-205ENST00000569093 CENPBP07199 599 aaPredicted RBP29.14■■■□□ 2.26
CCNF-205ENST00000569093 CYP2C18P33260 490 aa29.14■■■□□ 2.26
CCNF-205ENST00000569093 CHMP4BP1P59074 171 aa29.14■■■□□ 2.26
CCNF-205ENST00000569093 MRPS9P82933 396 aaKnown RBP29.14■■■□□ 2.26
CCNF-205ENST00000569093 FGD1P98174 961 aa29.14■■■□□ 2.26
CCNF-205ENST00000569093 SP2Q02086 613 aa29.14■■■□□ 2.26
CCNF-205ENST00000569093 FAM47CQ5HY64 1035 aa29.14■■■□□ 2.26
CCNF-205ENST00000569093 BLOC1S2Q6QNY1 142 aa29.14■■■□□ 2.26
CCNF-205ENST00000569093 CUL5Q93034 780 aa29.14■■■□□ 2.26
CCNF-205ENST00000569093 FAM217BQ9NTX9 383 aaPredicted RBP29.14■■■□□ 2.26
CCNF-205ENST00000569093 TRMT13Q9NUP7 481 aaKnown RBP29.14■■■□□ 2.26
CCNF-205ENST00000569093 UMODL1Q5DID0 1318 aa29.14■■■□□ 2.25
CCNF-205ENST00000569093 GOLGA8AA7E2F4 631 aa29.13■■■□□ 2.25
CCNF-205ENST00000569093 GOLGA8BA8MQT2 603 aa29.13■■■□□ 2.25
CCNF-205ENST00000569093 PIK3CDO00329 1044 aa29.13■■■□□ 2.25
CCNF-205ENST00000569093 APOBRQ0VD83 1088 aa29.13■■■□□ 2.25
CCNF-205ENST00000569093 FUT2Q10981 343 aa29.13■■■□□ 2.25
CCNF-205ENST00000569093 HEATR3Q7Z4Q2 680 aa29.13■■■□□ 2.25
CCNF-205ENST00000569093 DHX37Q8IY37 1157 aaKnown RBP29.13■■■□□ 2.25
CCNF-205ENST00000569093 PSTPIP2Q9H939 334 aa29.13■■■□□ 2.25
CCNF-205ENST00000569093 RTEL1Q9NZ71 1219 aa29.13■■■□□ 2.25
CCNF-205ENST00000569093 FRMPD4Q14CM0 1322 aa29.13■■■□□ 2.25
CCNF-205ENST00000569093 CNTNAP5Q8WYK1 1306 aa29.13■■■□□ 2.25
CCNF-205ENST00000569093 CSF2RAP15509 400 aa29.12■■■□□ 2.25
CCNF-205ENST00000569093 CDC27P30260 824 aa29.12■■■□□ 2.25
CCNF-205ENST00000569093 LAMC2Q13753 1193 aa29.12■■■□□ 2.25
CCNF-205ENST00000569093 C16orf59Q7L2K0 433 aa29.12■■■□□ 2.25
CCNF-205ENST00000569093 BRF1Q92994 677 aa29.12■■■□□ 2.25
CCNF-205ENST00000569093 HIPK3Q9H422 1215 aa29.12■■■□□ 2.25
CCNF-205ENST00000569093 RPS6KB1P23443 525 aa29.11■■■□□ 2.25
CCNF-205ENST00000569093 UBE2SQ16763 222 aa29.11■■■□□ 2.25
CCNF-205ENST00000569093 MYSM1Q5VVJ2 828 aa29.11■■■□□ 2.25
CCNF-205ENST00000569093 KCNV1Q6PIU1 500 aa29.11■■■□□ 2.25
CCNF-205ENST00000569093 KAT2BQ92831 832 aa29.11■■■□□ 2.25
CCNF-205ENST00000569093 EMID1Q96A84 441 aaPredicted RBP29.11■■■□□ 2.25
CCNF-205ENST00000569093 BCAS3Q9H6U6 928 aa29.11■■■□□ 2.25
CCNF-205ENST00000569093 V9GY48 417 aaPredicted RBP29.11■■■□□ 2.25
CCNF-205ENST00000569093 GGPS1O95749 300 aa29.1■■■□□ 2.25
CCNF-205ENST00000569093 CYP2C9P11712 490 aa29.1■■■□□ 2.25
CCNF-205ENST00000569093 CASTP20810 708 aaKnown RBP29.1■■■□□ 2.25
CCNF-205ENST00000569093 CELF3Q5SZQ8 465 aaKnown RBP29.1■■■□□ 2.25
CCNF-205ENST00000569093 WWC2Q6AWC2 1192 aa29.1■■■□□ 2.25
CCNF-205ENST00000569093 Q7L0L9 218 aa29.1■■■□□ 2.25
CCNF-205ENST00000569093 TMEM199Q8N511 208 aa29.1■■■□□ 2.25
CCNF-205ENST00000569093 NOC4LQ9BVI4 516 aaKnown RBP29.1■■■□□ 2.25
CCNF-205ENST00000569093 USP26Q9BXU7 913 aa29.1■■■□□ 2.25
CCNF-205ENST00000569093 ACRP10323 421 aa29.09■■■□□ 2.25
CCNF-205ENST00000569093 UBA1P22314 1058 aaKnown RBP29.09■■■□□ 2.25
CCNF-205ENST00000569093 ADD1P35611 737 aaKnown RBP29.09■■■□□ 2.25
CCNF-205ENST00000569093 CCL23P55773 120 aa29.09■■■□□ 2.25
CCNF-205ENST00000569093 DGKDQ16760 1214 aa29.09■■■□□ 2.25
CCNF-205ENST00000569093 NFRKBQ6P4R8 1299 aa29.09■■■□□ 2.25
CCNF-205ENST00000569093 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.09■■■□□ 2.252e-7■□□□□ 10.9
CCNF-205ENST00000569093 TGFB3P10600 412 aa29.08■■■□□ 2.25
CCNF-205ENST00000569093 PPIGQ13427 754 aaKnown RBP eCLIP29.08■■■□□ 2.257e-9■■■□□ 17.2
CCNF-205ENST00000569093 HSDL1Q3SXM5 330 aa29.08■■■□□ 2.25
CCNF-205ENST00000569093 TYW1BQ6NUM6 668 aa29.08■■■□□ 2.25
CCNF-205ENST00000569093 GPR153Q6NV75 609 aa29.08■■■□□ 2.25
CCNF-205ENST00000569093 PPTC7Q8NI37 304 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms