RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001		B8ZZF3	427 aa		4.88	□□□□□ -1.63
BBS4-215	ENST00000569001	MSC	O60682	206 aa		4.88	□□□□□ -1.63
BBS4-215	ENST00000569001	SASH1	O94885	1247 aa		4.88	□□□□□ -1.63
BBS4-215	ENST00000569001	CAPNS1	P04632	268 aa		4.88	□□□□□ -1.63
BBS4-215	ENST00000569001	SCG5	P05408	212 aa		4.88	□□□□□ -1.63
BBS4-215	ENST00000569001	YOD1	Q5VVQ6	348 aa	Predicted RBP	4.88	□□□□□ -1.63
BBS4-215	ENST00000569001	MILR1	Q7Z6M3	343 aa		4.88	□□□□□ -1.63
BBS4-215	ENST00000569001	DCP2	Q8IU60	420 aa	Known RBP	4.88	□□□□□ -1.63
BBS4-215	ENST00000569001	ZBTB8A	Q96BR9	441 aa		4.88	□□□□□ -1.63
BBS4-215	ENST00000569001	TMEM169	Q96HH4	297 aa		4.88	□□□□□ -1.63
BBS4-215	ENST00000569001	GORASP1	Q9BQQ3	440 aa		4.88	□□□□□ -1.63
BBS4-215	ENST00000569001	KRTAP4-9	Q9BYQ8	210 aa		4.88	□□□□□ -1.63
BBS4-215	ENST00000569001	SPATA6	Q9NWH7	488 aa	Predicted RBP	4.88	□□□□□ -1.63
BBS4-215	ENST00000569001	CCDC85C	A6NKD9	419 aa		4.87	□□□□□ -1.63
BBS4-215	ENST00000569001		E9PSI1	815 aa		4.87	□□□□□ -1.63
BBS4-215	ENST00000569001	DLX3	O60479	287 aa		4.87	□□□□□ -1.63
BBS4-215	ENST00000569001	CACNB2	Q08289	660 aa	Predicted RBP	4.87	□□□□□ -1.63
BBS4-215	ENST00000569001	KCNAB2	Q13303	367 aa		4.87	□□□□□ -1.63
BBS4-215	ENST00000569001	SLC9A5	Q14940	896 aa		4.87	□□□□□ -1.63
BBS4-215	ENST00000569001	SLC35F1	Q5T1Q4	408 aa		4.87	□□□□□ -1.63
BBS4-215	ENST00000569001	E4F1	Q66K89	784 aa	Predicted RBP	4.87	□□□□□ -1.63
BBS4-215	ENST00000569001	CD300LD	Q6UXZ3	194 aa		4.87	□□□□□ -1.63
BBS4-215	ENST00000569001	LIPI	Q6XZB0	460 aa		4.87	□□□□□ -1.63
BBS4-215	ENST00000569001	USP53	Q70EK8	1073 aa		4.87	□□□□□ -1.63
BBS4-215	ENST00000569001	SAPCD2	Q86UD0	394 aa		4.87	□□□□□ -1.63
BBS4-215	ENST00000569001	SLC43A3	Q8NBI5	491 aa		4.87	□□□□□ -1.63
BBS4-215	ENST00000569001	RELT	Q969Z4	430 aa		4.87	□□□□□ -1.63
BBS4-215	ENST00000569001	GML	Q99445	158 aa		4.87	□□□□□ -1.63
BBS4-215	ENST00000569001	JAM3	Q9BX67	310 aa		4.87	□□□□□ -1.63
BBS4-215	ENST00000569001	CLDND1	Q9NY35	253 aa		4.87	□□□□□ -1.63
BBS4-215	ENST00000569001	PRRG2	O14669	202 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	PRODH	O43272	600 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	MYO1B	O43795	1136 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	PRICKLE3	O43900	615 aa	Predicted RBP	4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	FOXD2	O60548	495 aa	Predicted RBP	4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	ZBTB7A	O95365	584 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	CP	P00450	1065 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	LTBR	P36941	435 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	KCNC1	P48547	511 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	NFIX	Q14938	502 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	NAALADL2	Q58DX5	795 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	ACBD5	Q5T8D3	534 aa	Predicted RBP	4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	NT5DC1	Q5TFE4	455 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	IQCE	Q6IPM2	695 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	KCNT2	Q6UVM3	1135 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	ETV3L	Q6ZN32	361 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	RBM12B	Q8IXT5	1001 aa	Known RBP	4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	SP8	Q8IXZ3	490 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	NLGN1	Q8N2Q7	840 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	ARRDC4	Q8NCT1	418 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	DDX1	Q92499	740 aa	Known RBP	4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	AP5M1	Q9H0R1	490 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	LUC7L	Q9NQ29	371 aa	Known RBP	4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	ARHGEF4	Q9NR80	690 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	RBPJL	Q9UBG7	517 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	NCAN	O14594	1321 aa		4.86	□□□□□ -1.63
BBS4-215	ENST00000569001	ADAMTS20	P59510	1910 aa		4.85	□□□□□ -1.63
BBS4-215	ENST00000569001	AGRP	O00253	132 aa		4.85	□□□□□ -1.63
BBS4-215	ENST00000569001	CYP2C8	P10632	490 aa		4.85	□□□□□ -1.63
BBS4-215	ENST00000569001	RAB33A	Q14088	237 aa		4.85	□□□□□ -1.63
BBS4-215	ENST00000569001	SPATC1	Q76KD6	591 aa		4.85	□□□□□ -1.63
BBS4-215	ENST00000569001	FERMT3	Q86UX7	667 aa		4.85	□□□□□ -1.63
BBS4-215	ENST00000569001	CARF	Q8N187	725 aa		4.85	□□□□□ -1.63
BBS4-215	ENST00000569001		Q8N1Y9	231 aa		4.85	□□□□□ -1.63
BBS4-215	ENST00000569001	CPA5	Q8WXQ8	436 aa		4.85	□□□□□ -1.63
BBS4-215	ENST00000569001	SEC14L1	Q92503	715 aa		4.85	□□□□□ -1.63
BBS4-215	ENST00000569001	ZSWIM3	Q96MP5	696 aa		4.85	□□□□□ -1.63
BBS4-215	ENST00000569001	PHF20	Q9BVI0	1012 aa		4.85	□□□□□ -1.63
BBS4-215	ENST00000569001	TRIM55	Q9BYV6	548 aa		4.85	□□□□□ -1.63
BBS4-215	ENST00000569001	RTEL1	Q9NZ71	1219 aa		4.85	□□□□□ -1.63
BBS4-215	ENST00000569001	RAPGEFL1	Q9UHV5	662 aa		4.85	□□□□□ -1.63
BBS4-215	ENST00000569001	PFDN2	Q9UHV9	154 aa		4.85	□□□□□ -1.63
BBS4-215	ENST00000569001	DUSP10	Q9Y6W6	482 aa		4.85	□□□□□ -1.63
BBS4-215	ENST00000569001		X6R8D5	127 aa		4.85	□□□□□ -1.63
BBS4-215	ENST00000569001	LSAMP	Q13449	338 aa		4.84	□□□□□ -1.63
BBS4-215	ENST00000569001	NTRK3	Q16288	839 aa		4.84	□□□□□ -1.63
BBS4-215	ENST00000569001	CR1L	Q2VPA4	569 aa		4.84	□□□□□ -1.63
BBS4-215	ENST00000569001	PHF19	Q5T6S3	580 aa		4.84	□□□□□ -1.63
BBS4-215	ENST00000569001	MROH9	Q5TGP6	573 aa		4.84	□□□□□ -1.63
BBS4-215	ENST00000569001	STEAP3	Q658P3	488 aa		4.84	□□□□□ -1.63
BBS4-215	ENST00000569001	MIB1	Q86YT6	1006 aa		4.84	□□□□□ -1.63
BBS4-215	ENST00000569001	RIOX2	Q8IUF8	465 aa		4.84	□□□□□ -1.63
BBS4-215	ENST00000569001	KCTD13	Q8WZ19	329 aa		4.84	□□□□□ -1.63
BBS4-215	ENST00000569001	OSBP2	Q969R2	916 aa		4.84	□□□□□ -1.63
BBS4-215	ENST00000569001	CCDC140	Q96MF4	163 aa		4.84	□□□□□ -1.63
BBS4-215	ENST00000569001	AARSD1	Q9BTE6	412 aa	Known RBP	4.84	□□□□□ -1.63
BBS4-215	ENST00000569001	C11orf84	Q9BUA3	381 aa	Predicted RBP	4.84	□□□□□ -1.63
BBS4-215	ENST00000569001	CDIP1	Q9H305	208 aa		4.84	□□□□□ -1.63
BBS4-215	ENST00000569001	USP40	Q9NVE5	1235 aa		4.84	□□□□□ -1.63
BBS4-215	ENST00000569001	PPP1R1B	Q9UD71	204 aa	Predicted RBP	4.84	□□□□□ -1.63
BBS4-215	ENST00000569001	COA3	Q9Y2R0	106 aa	Predicted RBP	4.84	□□□□□ -1.63
BBS4-215	ENST00000569001	SH3D21	A4FU49	640 aa		4.83	□□□□□ -1.64
BBS4-215	ENST00000569001	STK10	O94804	968 aa	Known RBP	4.83	□□□□□ -1.64
BBS4-215	ENST00000569001	COL6A2	P12110	1019 aa		4.83	□□□□□ -1.64
BBS4-215	ENST00000569001	SLC6A11	P48066	632 aa		4.83	□□□□□ -1.64
BBS4-215	ENST00000569001	ITGA1	P56199	1179 aa		4.83	□□□□□ -1.64
BBS4-215	ENST00000569001	MAP4K2	Q12851	820 aa		4.83	□□□□□ -1.64
BBS4-215	ENST00000569001	HSP90AA2P	Q14568	343 aa	Predicted RBP	4.83	□□□□□ -1.64
BBS4-215	ENST00000569001	RTP5	Q14D33	572 aa		4.83	□□□□□ -1.64
BBS4-215	ENST00000569001	TESK1	Q15569	626 aa		4.83	□□□□□ -1.64

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