RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 PYM1Q9BRP8 204 aaKnown RBP9.93□□□□□ -0.82
HDGFL3-206ENST00000568294 EPB41L5Q9HCM4 733 aa9.93□□□□□ -0.82
HDGFL3-206ENST00000568294 LRRC10BA6NIK2 292 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 USP17L15C9J2P7 530 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 USP17L13C9JLJ4 530 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 USP17L11C9JVI0 530 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 USP17L18D6R9N7 530 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 USP17L22D6RA61 530 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 USP17L17D6RBQ6 530 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 USP17L19D6RCP7 530 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 USP17L20D6RJB6 530 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 H0YHG0 523 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 RASA1P20936 1047 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 AMPD3Q01432 767 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 USP17L24Q0WX57 530 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 MIIPQ5JXC2 388 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 RNF187Q5TA31 235 aaPredicted RBP9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 USP17L6PQ6QN14 398 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 TPTE2Q6XPS3 522 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 EHBP1Q8NDI1 1231 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 HNRNPLLQ8WVV9 542 aaKnown RBP9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 AP1M1Q9BXS5 423 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 TSPYL1Q9H0U9 437 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 KBTBD4Q9NVX7 518 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 ZNF142P52746 1687 aaPredicted RBP9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 MYH7P12883 1935 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 PALMO75781 387 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 CARSP49589 748 aaKnown RBP9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 SHROOM1Q2M3G4 852 aaPredicted RBP9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 USH1GQ495M9 461 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 TMED8Q6PL24 325 aaPredicted RBP9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 ZSCAN29Q8IWY8 852 aaPredicted RBP9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 OR2W6PQ8NHA6 318 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 MYO1AQ9UBC5 1043 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 KIAA1024Q9UPX6 916 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 SFI1A8K8P3 1242 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 HSF2BPO75031 334 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 HEXIM1O94992 359 aaKnown RBP9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 FAM153BP0C7A2 387 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 GNAQP50148 359 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 RCAN1P53805 252 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 GTF2IP78347 998 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 FAM153CQ494X1 144 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 TTC31Q49AM3 519 aaPredicted RBP9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 CCNI2Q6ZMN8 369 aaPredicted RBP9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 DDX42Q86XP3 938 aaKnown RBP eCLIP9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 DHTKD1Q96HY7 919 aaPredicted RBP9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 BCAS3Q9H6U6 928 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 FAM153AQ9UHL3 310 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 SNX12Q9UMY4 172 aa9.92□□□□□ -0.82
HDGFL3-206ENST00000568294 CICQ96RK0 1608 aaPredicted RBP9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 POTEB3A0JP26 581 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 POTECB2RU33 542 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 G3V3G9 751 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 GNA11P29992 359 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 RFC4P35249 363 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 GRB10Q13322 594 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 DCAF8Q5TAQ9 597 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 POTEBQ6S5H4 581 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 KRT25Q7Z3Z0 450 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 RPGRQ92834 1020 aaKnown RBP9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 TSG101Q99816 390 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 MMTAG2Q9BU76 263 aaKnown RBP9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 IKZF4Q9H2S9 585 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 BMP2KQ9NSY1 1161 aaPredicted RBP9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 ADAMTSL3P82987 1691 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 TULP2O00295 520 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 CHMP2AO43633 222 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 ADCY7P51828 1080 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 RBM5P52756 815 aaKnown RBP eCLIP9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 GUCY1A3Q02108 690 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 ECM1Q16610 540 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 KIAA0753Q2KHM9 967 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 IQCEQ6IPM2 695 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 DGKHQ86XP1 1220 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 UHMK1Q8TAS1 419 aaKnown RBP9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 SPAG5Q96R06 1193 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 MED4Q9NPJ6 270 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 CCNL1Q9UK58 526 aaPredicted RBP9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 ECM29Q5VYK3 1845 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 NDUFAB1O14561 156 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 KCNK3O14649 394 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 AKR1B1P15121 316 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 MUM1L1Q5H9M0 696 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 MAEAQ7L5Y9 396 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 PACS2Q86VP3 889 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 CREG2Q8IUH2 290 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 KSR1Q8IVT5 923 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 TRIM58Q8NG06 486 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 CAPS2Q9BXY5 557 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 SH2D4AQ9H788 454 aa9.91□□□□□ -0.82
HDGFL3-206ENST00000568294 PLEKHG2Q9H7P9 1386 aa9.9□□□□□ -0.82
HDGFL3-206ENST00000568294 FLT1P17948 1338 aa9.9□□□□□ -0.82
HDGFL3-206ENST00000568294 CLIC2O15247 247 aa9.9□□□□□ -0.82
HDGFL3-206ENST00000568294 CEP104O60308 925 aa9.9□□□□□ -0.82
HDGFL3-206ENST00000568294 CLSTN1O94985 981 aa9.9□□□□□ -0.82
HDGFL3-206ENST00000568294 PABPC4Q13310 644 aaKnown RBP eCLIP9.9□□□□□ -0.82
HDGFL3-206ENST00000568294 DOK7Q18PE1 504 aa9.9□□□□□ -0.82
HDGFL3-206ENST00000568294 ODF2Q5BJF6 829 aa9.9□□□□□ -0.82
HDGFL3-206ENST00000568294 FBXW10Q5XX13 1052 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms