RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 TRIM9Q9C026 710 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 BLZF1Q9H2G9 400 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 MRPL44Q9H9J2 332 aaKnown RBP8.48□□□□□ -1.05
ATXN3-250ENST00000568290 NHEJ1Q9H9Q4 299 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-250ENST00000568290 LRWD1Q9UFC0 647 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 PUF60Q9UHX1 559 aaKnown RBP8.48□□□□□ -1.05
ATXN3-250ENST00000568290 MAD2L2Q9UI95 211 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 PLAGL2Q9UPG8 496 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 HYOU1Q9Y4L1 999 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 C10orf71Q711Q0 1435 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 A0A087X0B3 334 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 TTC26A0AVF1 554 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 GOLGA8KD6RF30 607 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 M0R2N6 131 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 AKR1B10O60218 316 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 PPP1R12BO60237 982 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-250ENST00000568290 BBOX1O75936 387 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 HLA-DOAP06340 250 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 CCDC172P0C7W6 258 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 IDEP14735 1019 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 RFC4P35249 363 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 FKBP3Q00688 224 aaKnown RBP8.47□□□□□ -1.05
ATXN3-250ENST00000568290 ITPK1Q13572 414 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 MCM6Q14566 821 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 CASP8Q14790 479 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 NPY5RQ15761 445 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 PPP2R5EQ16537 467 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 ZSCAN26Q16670 478 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 INF2Q27J81 1249 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 CCDC96Q2M329 555 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 LETM2Q2VYF4 491 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 FAM47AQ5JRC9 791 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 ALS2CLQ60I27 953 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 PPP4R3AQ6IN85 833 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 CENPPQ6IPU0 288 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 TTI2Q6NXR4 508 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 EMBQ6PCB8 327 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 ADGRA1Q86SQ6 560 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 SLFN12Q8IYM2 578 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 MMGT1Q8N4V1 131 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 EIF1ADQ8N9N8 165 aaKnown RBP8.47□□□□□ -1.05
ATXN3-250ENST00000568290 AFAP1L1Q8TED9 768 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 LARP4BQ92615 738 aaKnown RBP8.47□□□□□ -1.05
ATXN3-250ENST00000568290 VTI1AQ96AJ9 217 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 NOX5Q96PH1 765 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 PHOX2BQ99453 314 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 EYA3Q99504 573 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 IFIH1Q9BYX4 1025 aaKnown RBP8.47□□□□□ -1.05
ATXN3-250ENST00000568290 JADE2Q9NQC1 790 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 ADAM21Q9UKJ8 722 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 TACC3Q9Y6A5 838 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 LAMB1P07942 1786 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 ATP8B3O60423 1300 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 CCDC88AQ3V6T2 1871 aa8.47□□□□□ -1.05
ATXN3-250ENST00000568290 KIAA1551Q9HCM1 1747 aa8.46□□□□□ -1.05
ATXN3-250ENST00000568290 GPR75-ASB3A0A0A6YYF3 556 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 GRID2IPA4D2P6 1211 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 CES2O00748 559 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 CAPN2P17655 700 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 PLCG1P19174 1290 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 RPL13P26373 211 aaKnown RBP8.46□□□□□ -1.06
ATXN3-250ENST00000568290 TNNT3P45378 269 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-250ENST00000568290 LMAN1P49257 510 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 EPHB4P54760 987 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 ERVK-24P63145 666 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 AMPD2Q01433 879 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 CFAP221Q4G0U5 840 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 TRAPPC3LQ5T215 181 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 RCSD1Q6JBY9 416 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 MOXD1Q6UVY6 613 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 STXBP4Q6ZWJ1 553 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 ZNF572Q7Z3I7 529 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-250ENST00000568290 IFT20Q8IY31 132 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 TEX11Q8IYF3 940 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 MARCH10Q8NA82 808 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-250ENST00000568290 PXYLP1Q8TE99 480 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 TAF4BQ92750 862 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 CELF1Q92879 486 aaKnown RBP8.46□□□□□ -1.06
ATXN3-250ENST00000568290 CUL5Q93034 780 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 ACSBG1Q96GR2 724 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 TMEM47Q9BQJ4 181 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 SELENOOQ9BVL4 669 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 NDST4Q9H3R1 872 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 ANKZF1Q9H8Y5 726 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 SLC24A3Q9HC58 644 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 GGA1Q9UJY5 639 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 CACNA1SQ13698 1873 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 SCN7AQ01118 1682 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 PLIN4Q96Q06 1357 aa8.46□□□□□ -1.06
ATXN3-250ENST00000568290 CASZ1Q86V15 1759 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 PNMA6FA0A0J9YX94 578 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 SHTN1A0MZ66 631 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 GOLGA6L10A6NI86 522 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 B4DLN1 442 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 TBX3O15119 743 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 KLRC4O43908 158 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 HSF2BPO75031 334 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 TRIM37O94972 964 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 LCA5LO95447 670 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 FOSP01100 380 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms