RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 FAM126BQ8IXS8 530 aa9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 CMTR1Q8N1G2 835 aaKnown RBP9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 ZNF713Q8N859 430 aaPredicted RBP9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 INPP4AQ96PE3 977 aaPredicted RBP9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 SEC63Q9UGP8 760 aaKnown RBP9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 TBX21Q9UL17 535 aa9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 ZMYND8Q9ULU4 1186 aaPredicted RBP9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 KLF18A0A0U1RQI7 1052 aa9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 CCDC196A0A1B0GTZ2 297 aa9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 EIF5BO60841 1220 aaKnown RBP9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 CLTBP09497 229 aa9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 EIF2AK2P19525 551 aaKnown RBP9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 ADD1P35611 737 aaKnown RBP9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 CLK2P49760 499 aaKnown RBP9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 CPT1AP50416 773 aa9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 FXR1P51114 621 aaKnown RBP eCLIP9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 MRPS9P82933 396 aaKnown RBP9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 ARHGAP1Q07960 439 aa9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 PCNX4Q63HM2 1172 aa9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 TYW1BQ6NUM6 668 aa9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 SH3RF1Q7Z6J0 888 aa9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 IL31RAQ8NI17 732 aa9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 COPS5Q92905 334 aa9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 BRF1Q92994 677 aa9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 ZNF274Q96GC6 653 aaPredicted RBP9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 PSTPIP2Q9H939 334 aa9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 POLR3EQ9NVU0 708 aa9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 ATP11BQ9Y2G3 1177 aa9.44□□□□□ -0.9
HDGFL3-205ENST00000568129 LAMA3Q16787 3333 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 DCDC2CA8MYV0 355 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 SPATA31C2B4DYI2 1134 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 STXBP3O00186 592 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 PRPF3O43395 683 aaKnown RBP9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 SLC34A2O95436 690 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 GH1P01241 217 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 SYN1P17600 705 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 CASTP20810 708 aaKnown RBP9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 ITGB8P26012 769 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 PDIA3P30101 505 aaKnown RBP9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 CCND2P30279 289 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 SP2Q02086 613 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 PTPN11Q06124 597 aaPredicted RBP9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 APOBRQ0VD83 1088 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 SEMA3FQ13275 785 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 ITGA7Q13683 1181 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 LAMC2Q13753 1193 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 PKN1Q16512 942 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 PFKFB3Q16875 520 aaPredicted RBP9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 LY6KQ17RY6 165 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 LRIT3Q3SXY7 679 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 CELF3Q5SZQ8 465 aaKnown RBP9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 MYSM1Q5VVJ2 828 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 PPP1R18Q6NYC8 613 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 USP17L6PQ6QN14 398 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 CXCL17Q6UXB2 119 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 NOL8Q76FK4 1167 aaKnown RBP9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 SESTD1Q86VW0 696 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 OR6J1Q8NGC5 347 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 SENP7Q9BQF6 1050 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 RIC8AQ9NPQ8 531 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 BARHL2Q9NY43 387 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 V9GY48 417 aaPredicted RBP9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 TET1Q8NFU7 2136 aa9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 MYH9P35579 1960 aaKnown RBP9.43□□□□□ -0.9
HDGFL3-205ENST00000568129 SZT2Q5T011 3432 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 ESYT2A0FGR8 921 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 GOLGA8AA7E2F4 631 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 GOLGA8BA8MQT2 603 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 HAS3O00219 553 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 PPFIA4O75335 1185 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 TIMP1P01033 207 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 MYCNP04198 464 aaPredicted RBP9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 MMP3P08254 477 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 IFNAR1P17181 557 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 METAP2P50579 478 aaKnown RBP eCLIP9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 BRDTQ58F21 947 aaPredicted RBP9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 WWC2Q6AWC2 1192 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 GPR153Q6NV75 609 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 NFRKBQ6P4R8 1299 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 SEPT14Q6ZU15 432 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 FCHSD1Q86WN1 690 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 RAB11FIP4Q86YS3 637 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 CCDC82Q8N4S0 544 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 PPTC7Q8NI37 304 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 CRYGNQ8WXF5 182 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 KAT2BQ92831 832 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 MTG1Q9BT17 334 aaPredicted RBP9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 ZMYND12Q9H0C1 365 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 GLT8D2Q9H1C3 349 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 CYP46A1Q9Y6A2 500 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 SCN5AQ14524 2016 aa9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 LAMA2P24043 3122 aaKnown RBP9.42□□□□□ -0.9
HDGFL3-205ENST00000568129 hCG_1642624A0A1W2PR95 340 aa9.41□□□□□ -0.9
HDGFL3-205ENST00000568129 MAFGO15525 162 aa9.41□□□□□ -0.9
HDGFL3-205ENST00000568129 FOSP01100 380 aaPredicted RBP9.41□□□□□ -0.9
HDGFL3-205ENST00000568129 MYCLP12524 364 aaPredicted RBP9.41□□□□□ -0.9
HDGFL3-205ENST00000568129 MFSD5Q6N075 450 aa9.41□□□□□ -0.9
HDGFL3-205ENST00000568129 TDHQ8IZJ6 230 aa9.41□□□□□ -0.9
HDGFL3-205ENST00000568129 FAM177A1Q8N128 213 aaPredicted RBP9.41□□□□□ -0.9
HDGFL3-205ENST00000568129 SMARCC2Q8TAQ2 1214 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms