RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 GLT8D2Q9H1C3 349 aa12.73□□□□□ -0.37
LINC01228-201ENST00000567966 ABHD16BQ9H3Z7 469 aa12.73□□□□□ -0.37
LINC01228-201ENST00000567966 MTMR10Q9NXD2 777 aa12.73□□□□□ -0.37
LINC01228-201ENST00000567966 CTAGE5O15320 804 aa12.72□□□□□ -0.37
LINC01228-201ENST00000567966 PQBP1O60828 265 aaKnown RBP12.72□□□□□ -0.37
LINC01228-201ENST00000567966 ASGR1P07306 291 aa12.72□□□□□ -0.37
LINC01228-201ENST00000567966 C6orf222P0C671 652 aaPredicted RBP12.72□□□□□ -0.37
LINC01228-201ENST00000567966 EPHB4P54760 987 aa12.72□□□□□ -0.37
LINC01228-201ENST00000567966 CCT2P78371 535 aaKnown RBP12.72□□□□□ -0.37
LINC01228-201ENST00000567966 SSRP1Q08945 709 aaKnown RBP12.72□□□□□ -0.37
LINC01228-201ENST00000567966 ME3Q16798 604 aa12.72□□□□□ -0.37
LINC01228-201ENST00000567966 TMEM63BQ5T3F8 832 aa12.72□□□□□ -0.37
LINC01228-201ENST00000567966 GPR153Q6NV75 609 aa12.72□□□□□ -0.37
LINC01228-201ENST00000567966 HOMER1Q86YM7 354 aa12.72□□□□□ -0.37
LINC01228-201ENST00000567966 CCDC82Q8N4S0 544 aa12.72□□□□□ -0.37
LINC01228-201ENST00000567966 LLPHQ9BRT6 129 aaKnown RBP12.72□□□□□ -0.37
LINC01228-201ENST00000567966 UPF3AQ9H1J1 476 aaKnown RBP12.72□□□□□ -0.37
LINC01228-201ENST00000567966 STARD7Q9NQZ5 370 aa12.72□□□□□ -0.37
LINC01228-201ENST00000567966 PDGFCQ9NRA1 345 aa12.72□□□□□ -0.37
LINC01228-201ENST00000567966 CYP39A1Q9NYL5 469 aa12.72□□□□□ -0.37
LINC01228-201ENST00000567966 B4DLN1 442 aa12.71□□□□□ -0.37
LINC01228-201ENST00000567966 PPP1R11O60927 126 aaPredicted RBP12.71□□□□□ -0.37
LINC01228-201ENST00000567966 CLTBP09497 229 aa12.71□□□□□ -0.37
LINC01228-201ENST00000567966 MRPL12P52815 198 aaKnown RBP12.71□□□□□ -0.37
LINC01228-201ENST00000567966 GJA9P57773 515 aa12.71□□□□□ -0.37
LINC01228-201ENST00000567966 BEX3Q00994 111 aa12.71□□□□□ -0.37
LINC01228-201ENST00000567966 FAAP100Q0VG06 881 aa12.71□□□□□ -0.37
LINC01228-201ENST00000567966 SCRN1Q12765 414 aa12.71□□□□□ -0.37
LINC01228-201ENST00000567966 PFKFB3Q16875 520 aaPredicted RBP12.71□□□□□ -0.37
LINC01228-201ENST00000567966 MCTP2Q6DN12 878 aa12.71□□□□□ -0.37
LINC01228-201ENST00000567966 PPP1R18Q6NYC8 613 aa12.71□□□□□ -0.37
LINC01228-201ENST00000567966 NSMFQ6X4W1 530 aa12.71□□□□□ -0.37
LINC01228-201ENST00000567966 RAB11FIP4Q86YS3 637 aa12.71□□□□□ -0.37
LINC01228-201ENST00000567966 CMTR1Q8N1G2 835 aaKnown RBP12.71□□□□□ -0.37
LINC01228-201ENST00000567966 CCDC12Q8WUD4 166 aaPredicted RBP12.71□□□□□ -0.37
LINC01228-201ENST00000567966 GTF3C6Q969F1 213 aa12.71□□□□□ -0.37
LINC01228-201ENST00000567966 SH3GLB2Q9NR46 395 aa12.71□□□□□ -0.37
LINC01228-201ENST00000567966 BARHL2Q9NY43 387 aa12.71□□□□□ -0.37
LINC01228-201ENST00000567966 ADD3Q9UEY8 706 aaKnown RBP12.71□□□□□ -0.37
LINC01228-201ENST00000567966 COL6A3P12111 3177 aa12.71□□□□□ -0.37
LINC01228-201ENST00000567966 CNTNAP5Q8WYK1 1306 aa12.7□□□□□ -0.38
LINC01228-201ENST00000567966 LAMA2P24043 3122 aaKnown RBP12.7□□□□□ -0.38
LINC01228-201ENST00000567966 MOXD2PA6NHM9 499 aa12.7□□□□□ -0.38
LINC01228-201ENST00000567966 PIK3CDO00329 1044 aa12.7□□□□□ -0.38
LINC01228-201ENST00000567966 NFIBO00712 420 aa12.7□□□□□ -0.38
LINC01228-201ENST00000567966 KIAA0355O15063 1070 aa12.7□□□□□ -0.38
LINC01228-201ENST00000567966 DEXIO95424 95 aa12.7□□□□□ -0.38
LINC01228-201ENST00000567966 SCG2P13521 617 aa12.7□□□□□ -0.38
LINC01228-201ENST00000567966 CST5P28325 142 aaPredicted RBP12.7□□□□□ -0.38
LINC01228-201ENST00000567966 TNFAIP2Q03169 654 aa12.7□□□□□ -0.38
LINC01228-201ENST00000567966 STK3Q13188 491 aa12.7□□□□□ -0.38
LINC01228-201ENST00000567966 BAATQ14032 418 aaPredicted RBP12.7□□□□□ -0.38
LINC01228-201ENST00000567966 USH1GQ495M9 461 aa12.7□□□□□ -0.38
LINC01228-201ENST00000567966 GNASQ5JWF2 1037 aa12.7□□□□□ -0.38
LINC01228-201ENST00000567966 RNF207Q6ZRF8 634 aa12.7□□□□□ -0.38
LINC01228-201ENST00000567966 EEPD1Q7L9B9 569 aa12.7□□□□□ -0.38
LINC01228-201ENST00000567966 ANKRD33Q7Z3H0 272 aa12.7□□□□□ -0.38
LINC01228-201ENST00000567966 DNERQ8NFT8 737 aa12.7□□□□□ -0.38
LINC01228-201ENST00000567966 WASF1Q92558 559 aa12.7□□□□□ -0.38
LINC01228-201ENST00000567966 FAM161BQ96MY7 647 aa12.7□□□□□ -0.38
LINC01228-201ENST00000567966 MPHOSPH6Q99547 160 aaKnown RBP12.7□□□□□ -0.38
LINC01228-201ENST00000567966 LARP6Q9BRS8 491 aaKnown RBP12.7□□□□□ -0.38
LINC01228-201ENST00000567966 PSTPIP2Q9H939 334 aa12.7□□□□□ -0.38
LINC01228-201ENST00000567966 NCOA5Q9HCD5 579 aaKnown RBP12.7□□□□□ -0.38
LINC01228-201ENST00000567966 ESYT2A0FGR8 921 aa12.69□□□□□ -0.38
LINC01228-201ENST00000567966 ASB14A6NK59 587 aa12.69□□□□□ -0.38
LINC01228-201ENST00000567966 GCOM1H8Y6P7 765 aaPredicted RBP12.69□□□□□ -0.38
LINC01228-201ENST00000567966 POLR2MP0CAP2 368 aa12.69□□□□□ -0.38
LINC01228-201ENST00000567966 RAG1P15918 1043 aa12.69□□□□□ -0.38
LINC01228-201ENST00000567966 SMPD1P17405 629 aa12.69□□□□□ -0.38
LINC01228-201ENST00000567966 CDK7P50613 346 aa12.69□□□□□ -0.38
LINC01228-201ENST00000567966 HSD17B4P51659 736 aa12.69□□□□□ -0.38
LINC01228-201ENST00000567966 RPS6P62753 249 aaKnown RBP12.69□□□□□ -0.38
LINC01228-201ENST00000567966 GALNT17Q6IS24 598 aa12.69□□□□□ -0.38
LINC01228-201ENST00000567966 TAPT1Q6NXT6 567 aa12.69□□□□□ -0.38
LINC01228-201ENST00000567966 FBXO16Q8IX29 292 aaPredicted RBP12.69□□□□□ -0.38
LINC01228-201ENST00000567966 SNX21Q969T3 373 aa12.69□□□□□ -0.38
LINC01228-201ENST00000567966 VTI1AQ96AJ9 217 aa12.69□□□□□ -0.38
LINC01228-201ENST00000567966 SLC26A6Q9BXS9 759 aa12.69□□□□□ -0.38
LINC01228-201ENST00000567966 TMEM39AQ9NV64 488 aa12.69□□□□□ -0.38
LINC01228-201ENST00000567966 GNEQ9Y223 722 aaKnown RBP12.69□□□□□ -0.38
LINC01228-201ENST00000567966 STK36Q9NRP7 1315 aa12.68□□□□□ -0.38
LINC01228-201ENST00000567966 PTPDC1A2A3K4 754 aa12.68□□□□□ -0.38
LINC01228-201ENST00000567966 DYNC1LI2O43237 492 aaPredicted RBP12.68□□□□□ -0.38
LINC01228-201ENST00000567966 XBP1P17861 261 aa12.68□□□□□ -0.38
LINC01228-201ENST00000567966 GNA11P29992 359 aa12.68□□□□□ -0.38
LINC01228-201ENST00000567966 NKX3-2P78367 333 aa12.68□□□□□ -0.38
LINC01228-201ENST00000567966 HMGN5P82970 282 aaKnown RBP12.68□□□□□ -0.38
LINC01228-201ENST00000567966 PKN1Q16512 942 aa12.68□□□□□ -0.38
LINC01228-201ENST00000567966 SLC30A10Q6XR72 485 aa12.68□□□□□ -0.38
LINC01228-201ENST00000567966 NOL8Q76FK4 1167 aaKnown RBP12.68□□□□□ -0.38
LINC01228-201ENST00000567966 HEATR3Q7Z4Q2 680 aa12.68□□□□□ -0.38
LINC01228-201ENST00000567966 PCSK9Q8NBP7 692 aaKnown RBP12.68□□□□□ -0.38
LINC01228-201ENST00000567966 NSUN6Q8TEA1 469 aaKnown RBP12.68□□□□□ -0.38
LINC01228-201ENST00000567966 PIBF1Q8WXW3 757 aa12.68□□□□□ -0.38
LINC01228-201ENST00000567966 CUL5Q93034 780 aa12.68□□□□□ -0.38
LINC01228-201ENST00000567966 PHKBQ93100 1093 aa12.68□□□□□ -0.38
LINC01228-201ENST00000567966 GLT1D1Q96MS3 346 aa12.68□□□□□ -0.38
LINC01228-201ENST00000567966 TOX2Q96NM4 488 aa12.68□□□□□ -0.38
LINC01228-201ENST00000567966 IWS1Q96ST2 819 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms