RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	STXBP3	O00186	592 aa		6.73	□□□□□ -1.33
CBFB-208	ENST00000567947	INHBB	P09529	407 aa		6.73	□□□□□ -1.33
CBFB-208	ENST00000567947	AMPD2	Q01433	879 aa		6.73	□□□□□ -1.33
CBFB-208	ENST00000567947	PPP2R5E	Q16537	467 aa		6.73	□□□□□ -1.33
CBFB-208	ENST00000567947	KIAA1211L	Q6NV74	962 aa		6.73	□□□□□ -1.33
CBFB-208	ENST00000567947	FAM129C	Q86XR2	697 aa		6.73	□□□□□ -1.33
CBFB-208	ENST00000567947	PANK1	Q8TE04	598 aa		6.73	□□□□□ -1.33
CBFB-208	ENST00000567947	KCNC2	Q96PR1	638 aa		6.73	□□□□□ -1.33
CBFB-208	ENST00000567947	NCOA2	Q15596	1464 aa		6.73	□□□□□ -1.33
CBFB-208	ENST00000567947	TRBV23OR9-2	A0A075B6M9	112 aa		6.72	□□□□□ -1.33
CBFB-208	ENST00000567947	GLI4	P10075	376 aa		6.72	□□□□□ -1.33
CBFB-208	ENST00000567947	NAT2	P11245	290 aa		6.72	□□□□□ -1.33
CBFB-208	ENST00000567947	NCAPH	Q15003	741 aa		6.72	□□□□□ -1.33
CBFB-208	ENST00000567947	ADAT2	Q7Z6V5	191 aa	Known RBP	6.72	□□□□□ -1.33
CBFB-208	ENST00000567947	APEX2	Q9UBZ4	518 aa		6.72	□□□□□ -1.33
CBFB-208	ENST00000567947	EMC9	Q9Y3B6	208 aa		6.72	□□□□□ -1.33
CBFB-208	ENST00000567947	NPAT	Q14207	1427 aa		6.72	□□□□□ -1.33
CBFB-208	ENST00000567947	YEATS2	Q9ULM3	1422 aa		6.72	□□□□□ -1.33
CBFB-208	ENST00000567947	SYCP2	Q9BX26	1530 aa		6.71	□□□□□ -1.33
CBFB-208	ENST00000567947	CCNB3	Q8WWL7	1395 aa		6.71	□□□□□ -1.33
CBFB-208	ENST00000567947	C2orf71	A6NGG8	1288 aa		6.71	□□□□□ -1.34
CBFB-208	ENST00000567947	VAMP4	O75379	141 aa		6.71	□□□□□ -1.34
CBFB-208	ENST00000567947	RAPGEF3	O95398	923 aa		6.71	□□□□□ -1.34
CBFB-208	ENST00000567947	SEPHS1	P49903	392 aa		6.71	□□□□□ -1.34
CBFB-208	ENST00000567947	AFF3	P51826	1226 aa	Known RBP	6.71	□□□□□ -1.34
CBFB-208	ENST00000567947	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	6.71	□□□□□ -1.34
CBFB-208	ENST00000567947	COPS5	Q92905	334 aa		6.71	□□□□□ -1.34
CBFB-208	ENST00000567947	RNF17	Q9BXT8	1623 aa	Known RBP	6.71	□□□□□ -1.34
CBFB-208	ENST00000567947	TCOF1	Q13428	1488 aa	Known RBP	6.71	□□□□□ -1.34
CBFB-208	ENST00000567947	CCDC141	Q6ZP82	1450 aa		6.71	□□□□□ -1.34
CBFB-208	ENST00000567947	ZC3H13	Q5T200	1668 aa	Known RBP	6.71	□□□□□ -1.34
CBFB-208	ENST00000567947	PREX1	Q8TCU6	1659 aa		6.71	□□□□□ -1.34
CBFB-208	ENST00000567947	ADAMTS20	P59510	1910 aa		6.7	□□□□□ -1.34
CBFB-208	ENST00000567947	TRAPPC8	Q9Y2L5	1435 aa		6.7	□□□□□ -1.34
CBFB-208	ENST00000567947	TRIM13	O60858	407 aa		6.7	□□□□□ -1.34
CBFB-208	ENST00000567947	ZNF200	P98182	395 aa	Predicted RBP	6.7	□□□□□ -1.34
CBFB-208	ENST00000567947	BICRAL	Q6AI39	1079 aa		6.7	□□□□□ -1.34
CBFB-208	ENST00000567947	LILRA6	Q6PI73	481 aa		6.7	□□□□□ -1.34
CBFB-208	ENST00000567947	POMZP3	Q6PJE2	187 aa		6.7	□□□□□ -1.34
CBFB-208	ENST00000567947	MARCH10	Q8NA82	808 aa	Predicted RBP	6.7	□□□□□ -1.34
CBFB-208	ENST00000567947	BVES	Q8NE79	360 aa		6.7	□□□□□ -1.34
CBFB-208	ENST00000567947	ANAPC16	Q96DE5	110 aa		6.7	□□□□□ -1.34
CBFB-208	ENST00000567947	MTA3	Q9BTC8	594 aa		6.7	□□□□□ -1.34
CBFB-208	ENST00000567947	RNF38	Q9H0F5	515 aa		6.7	□□□□□ -1.34
CBFB-208	ENST00000567947	CAPN10	Q9HC96	672 aa		6.7	□□□□□ -1.34
CBFB-208	ENST00000567947	PARD6A	Q9NPB6	346 aa		6.7	□□□□□ -1.34
CBFB-208	ENST00000567947	AKT3	Q9Y243	479 aa		6.7	□□□□□ -1.34
CBFB-208	ENST00000567947	CROCC2	H7BZ55	1655 aa		6.7	□□□□□ -1.34
CBFB-208	ENST00000567947	KDM5D	Q9BY66	1539 aa		6.7	□□□□□ -1.34
CBFB-208	ENST00000567947	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	MYOM3	Q5VTT5	1437 aa		6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	ZNF142	P52746	1687 aa	Predicted RBP	6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	BUB1B	O60566	1050 aa	Predicted RBP	6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	TCF3	P15923	654 aa		6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	HOXA5	P20719	270 aa		6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	ERCC5	P28715	1186 aa	Predicted RBP	6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	TARBP2	Q15633	366 aa	Known RBP	6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	DPY19L1	Q2PZI1	675 aa		6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	TNNI3K	Q59H18	835 aa		6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	CNKSR3	Q6P9H4	555 aa		6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	TRIM59	Q8IWR1	403 aa		6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	NETO2	Q8NC67	525 aa		6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	TSPAN17	Q96FV3	270 aa		6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	MRGPRX3	Q96LB0	322 aa		6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	MMP19	Q99542	508 aa		6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	APBA2	Q99767	749 aa		6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	FBLN5	Q9UBX5	448 aa		6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	SUGT1	Q9Y2Z0	365 aa		6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	CCDC9	Q9Y3X0	531 aa	Known RBP	6.69	□□□□□ -1.34
CBFB-208	ENST00000567947	RIMS1	Q86UR5	1692 aa	Known RBP	6.68	□□□□□ -1.34
CBFB-208	ENST00000567947	CAMSAP2	Q08AD1	1489 aa		6.68	□□□□□ -1.34
CBFB-208	ENST00000567947	LMTK3	Q96Q04	1460 aa		6.68	□□□□□ -1.34
CBFB-208	ENST00000567947		A0A1W2PQJ5	194 aa		6.68	□□□□□ -1.34
CBFB-208	ENST00000567947	PFKL	P17858	780 aa		6.68	□□□□□ -1.34
CBFB-208	ENST00000567947	PAM	P19021	973 aa		6.68	□□□□□ -1.34
CBFB-208	ENST00000567947	TACR1	P25103	407 aa		6.68	□□□□□ -1.34
CBFB-208	ENST00000567947	LZTR1	Q8N653	840 aa		6.68	□□□□□ -1.34
CBFB-208	ENST00000567947	HCFC2	Q9Y5Z7	792 aa		6.68	□□□□□ -1.34
CBFB-208	ENST00000567947	DEPDC5	O75140	1603 aa		6.68	□□□□□ -1.34
CBFB-208	ENST00000567947	C3	P01024	1663 aa		6.68	□□□□□ -1.34
CBFB-208	ENST00000567947	KDM5A	P29375	1690 aa	Known RBP	6.68	□□□□□ -1.34
CBFB-208	ENST00000567947	A2M	P01023	1474 aa		6.67	□□□□□ -1.34
CBFB-208	ENST00000567947	NPHP3-ACAD11	A0A0J9YXS1	232 aa		6.67	□□□□□ -1.34
CBFB-208	ENST00000567947	SMAD7	O15105	426 aa	Known RBP	6.67	□□□□□ -1.34
CBFB-208	ENST00000567947	PPP1R11	O60927	126 aa	Predicted RBP	6.67	□□□□□ -1.34
CBFB-208	ENST00000567947	FGR	P09769	529 aa		6.67	□□□□□ -1.34
CBFB-208	ENST00000567947	PRR5	P85299	388 aa		6.67	□□□□□ -1.34
CBFB-208	ENST00000567947	CABP7	Q86V35	215 aa		6.67	□□□□□ -1.34
CBFB-208	ENST00000567947	VPS37D	Q86XT2	251 aa		6.67	□□□□□ -1.34
CBFB-208	ENST00000567947	LINC01356	Q8N9X3	169 aa		6.67	□□□□□ -1.34
CBFB-208	ENST00000567947	TINF2	Q9BSI4	451 aa		6.67	□□□□□ -1.34
CBFB-208	ENST00000567947	NKX2-4	Q9H2Z4	354 aa		6.67	□□□□□ -1.34
CBFB-208	ENST00000567947	ACTR10	Q9NZ32	417 aa		6.67	□□□□□ -1.34
CBFB-208	ENST00000567947	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	6.67	□□□□□ -1.34
CBFB-208	ENST00000567947	CFDP1	Q9UEE9	299 aa	Predicted RBP	6.67	□□□□□ -1.34
CBFB-208	ENST00000567947	PRKAG3	Q9UGI9	489 aa		6.67	□□□□□ -1.34
CBFB-208	ENST00000567947	PLA2G2D	Q9UNK4	145 aa		6.67	□□□□□ -1.34
CBFB-208	ENST00000567947	DNMT1	P26358	1616 aa	Known RBP	6.67	□□□□□ -1.34
CBFB-208	ENST00000567947	ADGRL2	O95490	1459 aa		6.66	□□□□□ -1.34
CBFB-208	ENST00000567947	C7orf72	A4D263	438 aa		6.66	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms