RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 REC8O95072 547 aa12.94□□□□□ -0.34
CDH3-206ENST00000567674 CFBP00751 764 aa12.94□□□□□ -0.34
CDH3-206ENST00000567674 CASTP20810 708 aaKnown RBP12.94□□□□□ -0.34
CDH3-206ENST00000567674 GNPTABQ3T906 1256 aa12.94□□□□□ -0.34
CDH3-206ENST00000567674 CXCL17Q6UXB2 119 aa12.94□□□□□ -0.34
CDH3-206ENST00000567674 EEPD1Q7L9B9 569 aa12.94□□□□□ -0.34
CDH3-206ENST00000567674 RPUSD2Q8IZ73 545 aaKnown RBP12.94□□□□□ -0.34
CDH3-206ENST00000567674 FANCBQ8NB91 859 aa12.94□□□□□ -0.34
CDH3-206ENST00000567674 OR6J1Q8NGC5 347 aa12.94□□□□□ -0.34
CDH3-206ENST00000567674 TAAR1Q96RJ0 339 aa12.94□□□□□ -0.34
CDH3-206ENST00000567674 KATNAL1Q9BW62 490 aa12.94□□□□□ -0.34
CDH3-206ENST00000567674 GLT8D2Q9H1C3 349 aa12.94□□□□□ -0.34
CDH3-206ENST00000567674 SEMA6BQ9H3T3 888 aa12.94□□□□□ -0.34
CDH3-206ENST00000567674 LTBP2Q14767 1821 aa12.93□□□□□ -0.34
CDH3-206ENST00000567674 CCDC196A0A1B0GTZ2 297 aa12.93□□□□□ -0.34
CDH3-206ENST00000567674 MAFGO15525 162 aa12.93□□□□□ -0.34
CDH3-206ENST00000567674 PPFIA4O75335 1185 aa12.93□□□□□ -0.34
CDH3-206ENST00000567674 NEFLP07196 543 aa12.93□□□□□ -0.34
CDH3-206ENST00000567674 HOXD8P13378 290 aaPredicted RBP12.93□□□□□ -0.34
CDH3-206ENST00000567674 CCND2P30279 289 aa12.93□□□□□ -0.34
CDH3-206ENST00000567674 EXOSC10Q01780 885 aaKnown RBP12.93□□□□□ -0.34
CDH3-206ENST00000567674 DGKDQ16760 1214 aa12.93□□□□□ -0.34
CDH3-206ENST00000567674 PSRC1Q6PGN9 363 aaPredicted RBP12.93□□□□□ -0.34
CDH3-206ENST00000567674 NFXL1Q6ZNB6 911 aa12.93□□□□□ -0.34
CDH3-206ENST00000567674 SH3RF1Q7Z6J0 888 aa12.93□□□□□ -0.34
CDH3-206ENST00000567674 GIMAP8Q8ND71 665 aaPredicted RBP12.93□□□□□ -0.34
CDH3-206ENST00000567674 PPTC7Q8NI37 304 aa12.93□□□□□ -0.34
CDH3-206ENST00000567674 CUL5Q93034 780 aa12.93□□□□□ -0.34
CDH3-206ENST00000567674 PURBQ96QR8 312 aaKnown RBP12.93□□□□□ -0.34
CDH3-206ENST00000567674 PIGSQ96S52 555 aa12.93□□□□□ -0.34
CDH3-206ENST00000567674 ALDH8A1Q9H2A2 487 aaPredicted RBP12.93□□□□□ -0.34
CDH3-206ENST00000567674 MTIF3Q9H2K0 278 aaKnown RBP12.93□□□□□ -0.34
CDH3-206ENST00000567674 CPVLQ9H3G5 476 aa12.93□□□□□ -0.34
CDH3-206ENST00000567674 DDX41Q9UJV9 622 aaKnown RBP12.93□□□□□ -0.34
CDH3-206ENST00000567674 LCTP09848 1927 aa12.93□□□□□ -0.34
CDH3-206ENST00000567674 PITPNM1O00562 1244 aa12.92□□□□□ -0.34
CDH3-206ENST00000567674 PPP1R11O60927 126 aaPredicted RBP12.92□□□□□ -0.34
CDH3-206ENST00000567674 FOSL2P15408 326 aa12.92□□□□□ -0.34
CDH3-206ENST00000567674 ICAM3P32942 547 aa12.92□□□□□ -0.34
CDH3-206ENST00000567674 RFC2P35250 354 aa12.92□□□□□ -0.34
CDH3-206ENST00000567674 BEX3Q00994 111 aa12.92□□□□□ -0.34
CDH3-206ENST00000567674 MCTP2Q6DN12 878 aa12.92□□□□□ -0.34
CDH3-206ENST00000567674 TBC1D5Q92609 795 aa12.92□□□□□ -0.34
CDH3-206ENST00000567674 CDHR1Q96JP9 859 aa12.92□□□□□ -0.34
CDH3-206ENST00000567674 SENP7Q9BQF6 1050 aa12.92□□□□□ -0.34
CDH3-206ENST00000567674 COL20A1Q9P218 1284 aa12.92□□□□□ -0.34
CDH3-206ENST00000567674 TAF6LQ9Y6J9 622 aa12.92□□□□□ -0.34
CDH3-206ENST00000567674 GRIN2DO15399 1336 aa12.91□□□□□ -0.34
CDH3-206ENST00000567674 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.91□□□□□ -0.34
CDH3-206ENST00000567674 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.91□□□□□ -0.34
CDH3-206ENST00000567674 PSMA5P28066 241 aa12.91□□□□□ -0.34
CDH3-206ENST00000567674 NEDD9Q14511 834 aa12.91□□□□□ -0.34
CDH3-206ENST00000567674 PGM5Q15124 567 aa12.91□□□□□ -0.34
CDH3-206ENST00000567674 SHHQ15465 462 aa12.91□□□□□ -0.34
CDH3-206ENST00000567674 RASIP1Q5U651 963 aa12.91□□□□□ -0.34
CDH3-206ENST00000567674 FAM43BQ6ZT52 329 aaPredicted RBP12.91□□□□□ -0.34
CDH3-206ENST00000567674 HOMER1Q86YM7 354 aa12.91□□□□□ -0.34
CDH3-206ENST00000567674 CCDC155Q8N6L0 562 aa12.91□□□□□ -0.34
CDH3-206ENST00000567674 MYLIPQ8WY64 445 aa12.91□□□□□ -0.34
CDH3-206ENST00000567674 INPP4AQ96PE3 977 aaPredicted RBP12.91□□□□□ -0.34
CDH3-206ENST00000567674 HIPK3Q9H422 1215 aa12.91□□□□□ -0.34
CDH3-206ENST00000567674 CDH23Q9H251 3354 aa12.9□□□□□ -0.34
CDH3-206ENST00000567674 FOSP01100 380 aaPredicted RBP12.9□□□□□ -0.34
CDH3-206ENST00000567674 ITGB8P26012 769 aa12.9□□□□□ -0.34
CDH3-206ENST00000567674 HSPA4P34932 840 aa12.9□□□□□ -0.34
CDH3-206ENST00000567674 ARHGAP1Q07960 439 aa12.9□□□□□ -0.34
CDH3-206ENST00000567674 RBL2Q08999 1139 aa12.9□□□□□ -0.34
CDH3-206ENST00000567674 BFSP2Q13515 415 aa12.9□□□□□ -0.34
CDH3-206ENST00000567674 SLC35G1Q2M3R5 365 aa12.9□□□□□ -0.34
CDH3-206ENST00000567674 CELF3Q5SZQ8 465 aaKnown RBP12.9□□□□□ -0.34
CDH3-206ENST00000567674 PCNX4Q63HM2 1172 aa12.9□□□□□ -0.34
CDH3-206ENST00000567674 PPP1R18Q6NYC8 613 aa12.9□□□□□ -0.34
CDH3-206ENST00000567674 APOA5Q6Q788 366 aa12.9□□□□□ -0.34
CDH3-206ENST00000567674 TMTC3Q6ZXV5 915 aa12.9□□□□□ -0.34
CDH3-206ENST00000567674 CHST3Q7LGC8 479 aa12.9□□□□□ -0.34
CDH3-206ENST00000567674 DHX37Q8IY37 1157 aaKnown RBP12.9□□□□□ -0.34
CDH3-206ENST00000567674 SRBD1Q8N5C6 995 aaKnown RBP12.9□□□□□ -0.34
CDH3-206ENST00000567674 CAGE1Q8TC20 777 aa12.9□□□□□ -0.34
CDH3-206ENST00000567674 AGXT2Q9BYV1 514 aa12.9□□□□□ -0.34
CDH3-206ENST00000567674 SENP2Q9HC62 589 aa12.9□□□□□ -0.34
CDH3-206ENST00000567674 IL23AQ9NPF7 189 aa12.9□□□□□ -0.34
CDH3-206ENST00000567674 MRVI1Q9Y6F6 885 aa12.9□□□□□ -0.34
CDH3-206ENST00000567674 MYH6P13533 1939 aa12.9□□□□□ -0.35
CDH3-206ENST00000567674 ZBTB43O43298 467 aa12.89□□□□□ -0.35
CDH3-206ENST00000567674 FIBPO43427 364 aa12.89□□□□□ -0.35
CDH3-206ENST00000567674 B4GALT4O60513 344 aa12.89□□□□□ -0.35
CDH3-206ENST00000567674 MMP3P08254 477 aa12.89□□□□□ -0.35
CDH3-206ENST00000567674 EIF2AK2P19525 551 aaKnown RBP12.89□□□□□ -0.35
CDH3-206ENST00000567674 LY6KQ17RY6 165 aa12.89□□□□□ -0.35
CDH3-206ENST00000567674 MYSM1Q5VVJ2 828 aa12.89□□□□□ -0.35
CDH3-206ENST00000567674 SEPT14Q6ZU15 432 aa12.89□□□□□ -0.35
CDH3-206ENST00000567674 FAM177A1Q8N128 213 aaPredicted RBP12.89□□□□□ -0.35
CDH3-206ENST00000567674 HERVK_113Q902F9 699 aa12.89□□□□□ -0.35
CDH3-206ENST00000567674 RNPC3Q96LT9 517 aaKnown RBP12.89□□□□□ -0.35
CDH3-206ENST00000567674 NOC4LQ9BVI4 516 aaKnown RBP12.89□□□□□ -0.35
CDH3-206ENST00000567674 USP26Q9BXU7 913 aa12.89□□□□□ -0.35
CDH3-206ENST00000567674 PSTPIP2Q9H939 334 aa12.89□□□□□ -0.35
CDH3-206ENST00000567674 EHMT1Q9H9B1 1298 aa12.89□□□□□ -0.35
CDH3-206ENST00000567674 ARIH1Q9Y4X5 557 aaPredicted RBP12.89□□□□□ -0.35
CDH3-206ENST00000567674 SCN10AQ9Y5Y9 1956 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms