RNA–Protein interactions for RNA: ENST00000567269.5

CDH16-206, Transcript of cadherin 16, humanhuman

TSL 2

Gene CDH16, Length 3,539 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-206ENST00000567269 GOPCQ9HD26 462 aa13.49□□□□□ -0.25
CDH16-206ENST00000567269 BLOC1S4Q9NUP1 217 aa13.49□□□□□ -0.25
CDH16-206ENST00000567269 HERC5Q9UII4 1024 aaKnown RBP13.49□□□□□ -0.25
CDH16-206ENST00000567269 ZNRF3Q9ULT6 936 aa13.49□□□□□ -0.25
CDH16-206ENST00000567269 CDK5RAP2Q96SN8 1893 aa13.49□□□□□ -0.25
CDH16-206ENST00000567269 MFAP3LO75121 409 aa13.48□□□□□ -0.25
CDH16-206ENST00000567269 CCNE1P24864 410 aa13.48□□□□□ -0.25
CDH16-206ENST00000567269 RAD54LQ92698 747 aa13.48□□□□□ -0.25
CDH16-206ENST00000567269 C7orf25Q9BPX7 421 aa13.48□□□□□ -0.25
CDH16-206ENST00000567269 PIM2Q9P1W9 311 aa13.48□□□□□ -0.25
CDH16-206ENST00000567269 LIMA1Q9UHB6 759 aaKnown RBP13.48□□□□□ -0.25
CDH16-206ENST00000567269 LUC7L2Q9Y383 392 aaKnown RBP13.48□□□□□ -0.25
CDH16-206ENST00000567269 CASQ1P31415 396 aa13.48□□□□□ -0.25
CDH16-206ENST00000567269 PDIA5Q14554 519 aa13.48□□□□□ -0.25
CDH16-206ENST00000567269 HERC4Q5GLZ8 1057 aaPredicted RBP13.48□□□□□ -0.25
CDH16-206ENST00000567269 SLC30A10Q6XR72 485 aa13.48□□□□□ -0.25
CDH16-206ENST00000567269 CPXCR1Q8N123 301 aa13.48□□□□□ -0.25
CDH16-206ENST00000567269 IRX2Q9BZI1 471 aaPredicted RBP13.48□□□□□ -0.25
CDH16-206ENST00000567269 SCN9AQ15858 1988 aa13.48□□□□□ -0.25
CDH16-206ENST00000567269 SLU7O95391 586 aaKnown RBP13.48□□□□□ -0.25
CDH16-206ENST00000567269 CXCL9Q07325 125 aa13.48□□□□□ -0.25
CDH16-206ENST00000567269 ORC2Q13416 577 aaPredicted RBP13.48□□□□□ -0.25
CDH16-206ENST00000567269 GPBP1Q86WP2 473 aa13.48□□□□□ -0.25
CDH16-206ENST00000567269 FAM151AQ8WW52 585 aa13.48□□□□□ -0.25
CDH16-206ENST00000567269 FBXO28Q9NVF7 368 aa13.48□□□□□ -0.25
CDH16-206ENST00000567269 COL11A2P13942 1736 aaPredicted RBP13.47□□□□□ -0.25
CDH16-206ENST00000567269 SHTN1A0MZ66 631 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 POTEFA5A3E0 1075 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 POTEIP0CG38 1075 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 FKBP15Q5T1M5 1219 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 POTEGQ6S5H5 508 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 POTEEQ6S8J3 1075 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 PKD2L1Q9P0L9 805 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 ZBTB21Q9ULJ3 1066 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 NPHP3-ACAD11A0A0J9YXS1 232 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 MEIS2O14770 477 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 GTF2F1P35269 517 aaKnown RBP eCLIP13.47□□□□□ -0.25
CDH16-206ENST00000567269 PABPC4Q13310 644 aaKnown RBP eCLIP13.47□□□□□ -0.25
CDH16-206ENST00000567269 ECM1Q16610 540 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 FAM114A1Q8IWE2 563 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 CYP2W1Q8TAV3 490 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 TBC1D5Q92609 795 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 SLF1Q9BQI6 1058 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 LRRC27Q9C0I9 530 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 HOMER2Q9NSB8 354 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 CTDP1Q9Y5B0 961 aaPredicted RBP13.47□□□□□ -0.25
CDH16-206ENST00000567269 EDIL3O43854 480 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 MYH8P13535 1937 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 TTI2Q6NXR4 508 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 RAD9BQ6WBX8 426 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 TMEM139Q8IV31 216 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 KIAA0895Q8NCT3 520 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 ACRBPQ8NEB7 543 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 NT5C3AQ9H0P0 336 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 ZSWIM4Q9H7M6 989 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 PANK4Q9NVE7 773 aa13.47□□□□□ -0.25
CDH16-206ENST00000567269 LRRC37AA6NMS7 1700 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 TRAF5O00463 557 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 VIL1P09327 827 aaKnown RBP13.46□□□□□ -0.25
CDH16-206ENST00000567269 EEF1GP26641 437 aaKnown RBP13.46□□□□□ -0.25
CDH16-206ENST00000567269 POLD1P28340 1107 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 SYCP1Q15431 976 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 CIAPIN1Q6FI81 312 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 UNC13DQ70J99 1090 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 IRF2BP1Q8IU81 584 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 REXO1L1PQ8IX06 675 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 ZNF710Q8N1W2 664 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 MB21D1Q8N884 522 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 GLIS3Q8NEA6 775 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 ERMNQ8TAM6 284 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 PANX2Q96RD6 677 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 NAP1L4Q99733 375 aaKnown RBP13.46□□□□□ -0.25
CDH16-206ENST00000567269 TSG101Q99816 390 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 GLIS2Q9BZE0 524 aaPredicted RBP13.46□□□□□ -0.25
CDH16-206ENST00000567269 ZNHIT6Q9NWK9 470 aaKnown RBP13.46□□□□□ -0.25
CDH16-206ENST00000567269 GOLGA6L9A6NEM1 432 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 CLK2P49760 499 aaKnown RBP13.46□□□□□ -0.25
CDH16-206ENST00000567269 ELF2Q15723 593 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 CCDC40Q4G0X9 1142 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 DALRD3Q5D0E6 543 aaKnown RBP13.46□□□□□ -0.25
CDH16-206ENST00000567269 GMCL1Q96IK5 515 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 TAOK3Q9H2K8 898 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 THAP9Q9H5L6 903 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 MMRN2Q9H8L6 949 aa13.46□□□□□ -0.25
CDH16-206ENST00000567269 SRCAPQ6ZRS2 3230 aa13.46□□□□□ -0.26
CDH16-206ENST00000567269 TTC26A0AVF1 554 aa13.46□□□□□ -0.26
CDH16-206ENST00000567269 KIF5CO60282 957 aa13.46□□□□□ -0.26
CDH16-206ENST00000567269 IPO7O95373 1038 aaKnown RBP13.46□□□□□ -0.26
CDH16-206ENST00000567269 PLA2G4BP0C869 781 aa13.46□□□□□ -0.26
CDH16-206ENST00000567269 KCNJ6P48051 423 aa13.46□□□□□ -0.26
CDH16-206ENST00000567269 USP11P51784 963 aa13.46□□□□□ -0.26
CDH16-206ENST00000567269 SLFN12Q8IYM2 578 aa13.46□□□□□ -0.26
CDH16-206ENST00000567269 GMCL1P1Q8NEA9 526 aa13.46□□□□□ -0.26
CDH16-206ENST00000567269 CHURC1Q8WUH1 139 aa13.46□□□□□ -0.26
CDH16-206ENST00000567269 MTMR8Q96EF0 704 aa13.46□□□□□ -0.26
CDH16-206ENST00000567269 MAP7D2Q96T17 732 aa13.46□□□□□ -0.26
CDH16-206ENST00000567269 ZNF341Q9BYN7 854 aa13.46□□□□□ -0.26
CDH16-206ENST00000567269 RNF225M0QZC1 329 aaPredicted RBP13.45□□□□□ -0.26
CDH16-206ENST00000567269 NCBP1Q09161 790 aaKnown RBP13.45□□□□□ -0.26
CDH16-206ENST00000567269 AP3B2Q13367 1082 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms