RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 SLC5A6Q9Y289 635 aa4.11□□□□□ -1.75
HERPUD1-211ENST00000566550 GIT1Q9Y2X7 761 aa4.11□□□□□ -1.75
HERPUD1-211ENST00000566550 PPP2R3BQ9Y5P8 575 aa4.11□□□□□ -1.75
HERPUD1-211ENST00000566550 WASHC2AQ641Q2 1341 aa4.11□□□□□ -1.75
HERPUD1-211ENST00000566550 ABCC9O60706 1549 aa4.11□□□□□ -1.75
HERPUD1-211ENST00000566550 ERC2O15083 957 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 DLX3O60479 287 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 EIF4EBP3O60516 100 aaPredicted RBP4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 ADAM11O75078 769 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 GLRX3O76003 335 aaKnown RBP4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 KCNH1O95259 989 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 FKBP9O95302 570 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 PAPLNO95428 1278 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 CRTAMO95727 393 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 LTFP02788 710 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 NEFMP07197 916 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 LPOP22079 712 aaPredicted RBP4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 GBP1P32455 592 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 NLRP12P59046 1061 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 GALEQ14376 348 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 ACAP2Q15057 778 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 PLCL1Q15111 1095 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 IFIT1BQ5T764 474 aaKnown RBP4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 ZCCHC8Q6NZY4 707 aaKnown RBP4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 FKBP9P1Q75LS8 142 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 FAM186BQ8IYM0 893 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 BVESQ8NE79 360 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 POF1BQ8WVV4 589 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 PTPRN2Q92932 1015 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 GJA10Q969M2 543 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 TTC17Q96AE7 1141 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 ACSF2Q96CM8 615 aaPredicted RBP4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 HSPBAP1Q96EW2 488 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 NEUROD6Q96NK8 337 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 TOX2Q96NM4 488 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 CORO1BQ9BR76 489 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 HERPUD2Q9BSE4 406 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 SELENOOQ9BVL4 669 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 KLHL25Q9H0H3 589 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 CCDC86Q9H6F5 360 aaKnown RBP4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 NGRNQ9NPE2 291 aaKnown RBP4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 NLRC4Q9NPP4 1024 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 PAK6Q9NQU5 681 aaPredicted RBP4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 AKT3Q9Y243 479 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 PCDHA9Q9Y5H5 950 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 SNCAIPQ9Y6H5 919 aa4.1□□□□□ -1.75
HERPUD1-211ENST00000566550 B4E1Z4 1266 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 CBFA2T2O43439 604 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 CLEC3AO75596 197 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 PPM1BO75688 479 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 SNRPB2P08579 225 aaKnown RBP4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 FAM163BP0C2L3 166 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 PHKG2P15735 406 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 LIG1P18858 919 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 ECI1P42126 302 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 SARSP49591 514 aaKnown RBP4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 YARSP54577 528 aaKnown RBP4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 C19orf57Q0VDD7 668 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 KLF1Q13351 362 aaPredicted RBP4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 PPP2R5DQ14738 602 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 ODF1Q14990 250 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 PRSS53Q2L4Q9 553 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 TMEM201Q5SNT2 666 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 GPR158Q5T848 1215 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 SCARA3Q6AZY7 606 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 TOGARAM2Q6ZUX3 1019 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 ZAR1Q86SH2 424 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 ATG4DQ86TL0 474 aaPredicted RBP4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 DDX53Q86TM3 631 aaKnown RBP4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 MTDHQ86UE4 582 aaKnown RBP4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 C11orf74Q86VG3 221 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 SMG8Q8ND04 991 aaKnown RBP4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 ACRBPQ8NEB7 543 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 ZSCAN18Q8TBC5 510 aaPredicted RBP4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 KCTD13Q8WZ19 329 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 FAM84AQ96KN4 292 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 KRTAP17-1Q9BYP8 105 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 SLC12A5Q9H2X9 1139 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 SUGCTQ9HAC7 445 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 EMC7Q9NPA0 242 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 NMRK2Q9NPI5 230 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 SPTLC3Q9NUV7 552 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 C14orf119Q9NWQ9 140 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 C9orf78Q9NZ63 289 aaPredicted RBP4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 ZKSCAN5Q9Y2L8 839 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 ZNF451Q9Y4E5 1061 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 IPPQ9Y573 584 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 MRFAP1Q9Y605 127 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 TACC3Q9Y6A5 838 aa4.09□□□□□ -1.75
HERPUD1-211ENST00000566550 KAT6BQ8WYB5 2073 aa4.09□□□□□ -1.76
HERPUD1-211ENST00000566550 EXOC5O00471 708 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 SOX1O00570 391 aaPredicted RBP4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 TM4SF5O14894 197 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 AP1G1O43747 822 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 UBOX5O94941 541 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 AGR2O95994 175 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 SETSIPP0DME0 302 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 COL6A1P12109 1028 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 HSPA6P17066 643 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms