RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 USP17L6PQ6QN14 398 aa22.26■■□□□ 1.15
CCDC113-204ENST00000566498 TRIM43Q96BQ3 446 aaPredicted RBP22.26■■□□□ 1.15
CCDC113-204ENST00000566498 ZFP91Q96JP5 570 aaPredicted RBP22.26■■□□□ 1.15
CCDC113-204ENST00000566498 CCDC196A0A1B0GTZ2 297 aa22.25■■□□□ 1.15
CCDC113-204ENST00000566498 A0A1W2PPC1 479 aa22.25■■□□□ 1.15
CCDC113-204ENST00000566498 GH1P01241 217 aa22.25■■□□□ 1.15
CCDC113-204ENST00000566498 RAG1P15918 1043 aa22.25■■□□□ 1.15
CCDC113-204ENST00000566498 METAP2P50579 478 aaKnown RBP eCLIP22.25■■□□□ 1.15
CCDC113-204ENST00000566498 PSMC6P62333 389 aa22.25■■□□□ 1.15
CCDC113-204ENST00000566498 RUFY3Q7L099 469 aa22.25■■□□□ 1.15
CCDC113-204ENST00000566498 BADQ92934 168 aa22.25■■□□□ 1.15
CCDC113-204ENST00000566498 DDX41Q9UJV9 622 aaKnown RBP22.25■■□□□ 1.15
CCDC113-204ENST00000566498 CYP46A1Q9Y6A2 500 aa22.25■■□□□ 1.15
CCDC113-204ENST00000566498 TLR3O15455 904 aaKnown RBP22.24■■□□□ 1.15
CCDC113-204ENST00000566498 KPNA6O60684 536 aa22.24■■□□□ 1.15
CCDC113-204ENST00000566498 CDC27P30260 824 aa22.24■■□□□ 1.15
CCDC113-204ENST00000566498 ADD1P35611 737 aaKnown RBP22.24■■□□□ 1.15
CCDC113-204ENST00000566498 IL31RAQ8NI17 732 aa22.24■■□□□ 1.15
CCDC113-204ENST00000566498 MTG1Q9BT17 334 aaPredicted RBP22.24■■□□□ 1.15
CCDC113-204ENST00000566498 KIAA1217Q5T5P2 1943 aa22.23■■□□□ 1.15
CCDC113-204ENST00000566498 A6NJR5 290 aa22.23■■□□□ 1.15
CCDC113-204ENST00000566498 PIK3CDO00329 1044 aa22.23■■□□□ 1.15
CCDC113-204ENST00000566498 MEIS2O14770 477 aa22.23■■□□□ 1.15
CCDC113-204ENST00000566498 FXR1P51114 621 aaKnown RBP eCLIP22.23■■□□□ 1.15
CCDC113-204ENST00000566498 RCAN1P53805 252 aa22.23■■□□□ 1.15
CCDC113-204ENST00000566498 CHMP4BP1P59074 171 aa22.23■■□□□ 1.15
CCDC113-204ENST00000566498 KCNV1Q6PIU1 500 aa22.23■■□□□ 1.15
CCDC113-204ENST00000566498 DHX37Q8IY37 1157 aaKnown RBP22.23■■□□□ 1.15
CCDC113-204ENST00000566498 AFG1LQ8WV93 481 aa22.23■■□□□ 1.15
CCDC113-204ENST00000566498 GPKOWQ92917 476 aaPredicted RBP eCLIP22.23■■□□□ 1.15
CCDC113-204ENST00000566498 ZSWIM6Q9HCJ5 1215 aa22.23■■□□□ 1.15
CCDC113-204ENST00000566498 FAM217BQ9NTX9 383 aaPredicted RBP22.23■■□□□ 1.15
CCDC113-204ENST00000566498 RTEL1Q9NZ71 1219 aa22.23■■□□□ 1.15
CCDC113-204ENST00000566498 KIAA0355O15063 1070 aa22.22■■□□□ 1.15
CCDC113-204ENST00000566498 PURAQ00577 322 aaKnown RBP22.22■■□□□ 1.15
CCDC113-204ENST00000566498 TDHQ8IZJ6 230 aa22.22■■□□□ 1.15
CCDC113-204ENST00000566498 FBXL16Q8N461 479 aa22.22■■□□□ 1.15
CCDC113-204ENST00000566498 SEZ6LQ9BYH1 1024 aa22.22■■□□□ 1.15
CCDC113-204ENST00000566498 GRIN2DO15399 1336 aa22.22■■□□□ 1.15
CCDC113-204ENST00000566498 CNTNAP5Q8WYK1 1306 aa22.22■■□□□ 1.15
CCDC113-204ENST00000566498 TRIOBPQ9H2D6 2365 aa22.21■■□□□ 1.15
CCDC113-204ENST00000566498 NAPAP54920 295 aa22.21■■□□□ 1.15
CCDC113-204ENST00000566498 ARHGAP1Q07960 439 aa22.21■■□□□ 1.15
CCDC113-204ENST00000566498 FUT2Q10981 343 aa22.21■■□□□ 1.15
CCDC113-204ENST00000566498 LAMC2Q13753 1193 aa22.21■■□□□ 1.15
CCDC113-204ENST00000566498 FAM126BQ8IXS8 530 aa22.21■■□□□ 1.15
CCDC113-204ENST00000566498 SLC43A3Q8NBI5 491 aa22.21■■□□□ 1.15
CCDC113-204ENST00000566498 SORBS3O60504 671 aa22.2■■□□□ 1.14
CCDC113-204ENST00000566498 RGS20O76081 388 aa22.2■■□□□ 1.14
CCDC113-204ENST00000566498 TGFB3P10600 412 aa22.2■■□□□ 1.14
CCDC113-204ENST00000566498 ITGB8P26012 769 aa22.2■■□□□ 1.14
CCDC113-204ENST00000566498 UBE2SQ16763 222 aa22.2■■□□□ 1.14
CCDC113-204ENST00000566498 GNPTABQ3T906 1256 aa22.2■■□□□ 1.14
CCDC113-204ENST00000566498 FAM47CQ5HY64 1035 aa22.2■■□□□ 1.14
CCDC113-204ENST00000566498 WWC2Q6AWC2 1192 aa22.2■■□□□ 1.14
CCDC113-204ENST00000566498 AGXT2Q9BYV1 514 aa22.2■■□□□ 1.14
CCDC113-204ENST00000566498 UPF3BQ9BZI7 483 aaKnown RBP22.2■■□□□ 1.14
CCDC113-204ENST00000566498 TM6SF1Q9BZW5 370 aa22.2■■□□□ 1.14
CCDC113-204ENST00000566498 TRPV6Q9H1D0 765 aa22.2■■□□□ 1.14
CCDC113-204ENST00000566498 RANBP2P49792 3224 aaKnown RBP22.2■■□□□ 1.14
CCDC113-204ENST00000566498 MYH7BA7E2Y1 1941 aa22.19■■□□□ 1.14
CCDC113-204ENST00000566498 SPDYE3A6NKU9 549 aa22.19■■□□□ 1.14
CCDC113-204ENST00000566498 STAM2O75886 525 aa22.19■■□□□ 1.14
CCDC113-204ENST00000566498 TIMP1P01033 207 aa22.19■■□□□ 1.14
CCDC113-204ENST00000566498 CCT2P78371 535 aaKnown RBP22.19■■□□□ 1.14
CCDC113-204ENST00000566498 MRPS9P82933 396 aaKnown RBP22.19■■□□□ 1.14
CCDC113-204ENST00000566498 DGKDQ16760 1214 aa22.19■■□□□ 1.14
CCDC113-204ENST00000566498 NBPF20Q3BBV1 942 aa22.19■■□□□ 1.14
CCDC113-204ENST00000566498 MLXIPQ9HAP2 919 aa22.19■■□□□ 1.14
CCDC113-204ENST00000566498 EIF5BO60841 1220 aaKnown RBP22.18■■□□□ 1.14
CCDC113-204ENST00000566498 CD4P01730 458 aa22.18■■□□□ 1.14
CCDC113-204ENST00000566498 MMP3P08254 477 aa22.18■■□□□ 1.14
CCDC113-204ENST00000566498 PDIA3P30101 505 aaKnown RBP22.18■■□□□ 1.14
CCDC113-204ENST00000566498 AKAP17AQ02040 695 aaKnown RBP22.18■■□□□ 1.14
CCDC113-204ENST00000566498 SP2Q02086 613 aa22.18■■□□□ 1.14
CCDC113-204ENST00000566498 CELF3Q5SZQ8 465 aaKnown RBP22.18■■□□□ 1.14
CCDC113-204ENST00000566498 PCNX4Q63HM2 1172 aa22.18■■□□□ 1.14
CCDC113-204ENST00000566498 LARP6Q9BRS8 491 aaKnown RBP22.18■■□□□ 1.14
CCDC113-204ENST00000566498 PDRG1Q9NUG6 133 aa22.18■■□□□ 1.14
CCDC113-204ENST00000566498 TBX21Q9UL17 535 aa22.18■■□□□ 1.14
CCDC113-204ENST00000566498 PCDHA6Q9UN73 950 aa22.18■■□□□ 1.14
CCDC113-204ENST00000566498 PCDHA8Q9Y5H6 950 aa22.18■■□□□ 1.14
CCDC113-204ENST00000566498 FRMPD4Q14CM0 1322 aa22.17■■□□□ 1.14
CCDC113-204ENST00000566498 SMCO2A6NFE2 343 aa22.17■■□□□ 1.14
CCDC113-204ENST00000566498 B4GALT4O60513 344 aa22.17■■□□□ 1.14
CCDC113-204ENST00000566498 GGPS1O95749 300 aa22.17■■□□□ 1.14
CCDC113-204ENST00000566498 MYSM1Q5VVJ2 828 aa22.17■■□□□ 1.14
CCDC113-204ENST00000566498 XRRA1Q6P2D8 792 aa22.17■■□□□ 1.14
CCDC113-204ENST00000566498 PPP1R13LQ8WUF5 828 aa22.17■■□□□ 1.14
CCDC113-204ENST00000566498 EMID1Q96A84 441 aaPredicted RBP22.17■■□□□ 1.14
CCDC113-204ENST00000566498 SPATA33Q96N06 139 aa22.17■■□□□ 1.14
CCDC113-204ENST00000566498 PPP1R12CQ9BZL4 782 aa22.17■■□□□ 1.14
CCDC113-204ENST00000566498 ALDH8A1Q9H2A2 487 aaPredicted RBP22.17■■□□□ 1.14
CCDC113-204ENST00000566498 RIC8AQ9NPQ8 531 aa22.17■■□□□ 1.14
CCDC113-204ENST00000566498 BARHL2Q9NY43 387 aa22.17■■□□□ 1.14
CCDC113-204ENST00000566498 hCG_1984214I3L0E3 225 aa22.16■■□□□ 1.14
CCDC113-204ENST00000566498 STXBP3O00186 592 aa22.16■■□□□ 1.14
CCDC113-204ENST00000566498 ADCY7P51828 1080 aa22.16■■□□□ 1.14
CCDC113-204ENST00000566498 FPGSQ05932 587 aa22.16■■□□□ 1.14
CCDC113-204ENST00000566498 TOB2Q14106 344 aaPredicted RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms