RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 SCN10AQ9Y5Y9 1956 aa13.89□□□□□ -0.19
UBR1-206ENST00000566493 GBF1Q92538 1859 aa13.89□□□□□ -0.19
UBR1-206ENST00000566493 EIF2AK2P19525 551 aaKnown RBP13.88□□□□□ -0.19
UBR1-206ENST00000566493 CASTP20810 708 aaKnown RBP13.88□□□□□ -0.19
UBR1-206ENST00000566493 PDE4AP27815 886 aa13.88□□□□□ -0.19
UBR1-206ENST00000566493 VASPP50552 380 aaPredicted RBP13.88□□□□□ -0.19
UBR1-206ENST00000566493 SEC23AQ15436 765 aa13.88□□□□□ -0.19
UBR1-206ENST00000566493 LY6KQ17RY6 165 aa13.88□□□□□ -0.19
UBR1-206ENST00000566493 CYB5R4Q7L1T6 521 aa13.88□□□□□ -0.19
UBR1-206ENST00000566493 RALYLQ86SE5 291 aaKnown RBP13.88□□□□□ -0.19
UBR1-206ENST00000566493 STAG2Q8N3U4 1231 aa13.88□□□□□ -0.19
UBR1-206ENST00000566493 CCDC155Q8N6L0 562 aa13.88□□□□□ -0.19
UBR1-206ENST00000566493 PPP1R13LQ8WUF5 828 aa13.88□□□□□ -0.19
UBR1-206ENST00000566493 MAP3K20Q9NYL2 800 aaKnown RBP13.88□□□□□ -0.19
UBR1-206ENST00000566493 CDH23Q9H251 3354 aa13.87□□□□□ -0.19
UBR1-206ENST00000566493 IFIT3O14879 490 aaKnown RBP13.87□□□□□ -0.19
UBR1-206ENST00000566493 ZBTB5O15062 677 aa13.87□□□□□ -0.19
UBR1-206ENST00000566493 NR3C2P08235 984 aa13.87□□□□□ -0.19
UBR1-206ENST00000566493 MMP3P08254 477 aa13.87□□□□□ -0.19
UBR1-206ENST00000566493 GSPT1P15170 499 aaKnown RBP13.87□□□□□ -0.19
UBR1-206ENST00000566493 ATP2A2P16615 1042 aaKnown RBP13.87□□□□□ -0.19
UBR1-206ENST00000566493 RABGGTBP53611 331 aa13.87□□□□□ -0.19
UBR1-206ENST00000566493 ARHGAP1Q07960 439 aa13.87□□□□□ -0.19
UBR1-206ENST00000566493 SART3Q15020 963 aaKnown RBP13.87□□□□□ -0.19
UBR1-206ENST00000566493 PTGISQ16647 500 aa13.87□□□□□ -0.19
UBR1-206ENST00000566493 DGKDQ16760 1214 aa13.87□□□□□ -0.19
UBR1-206ENST00000566493 PPM1EQ8WY54 764 aa13.87□□□□□ -0.19
UBR1-206ENST00000566493 SYMPKQ92797 1274 aaKnown RBP13.87□□□□□ -0.19
UBR1-206ENST00000566493 FTOQ9C0B1 505 aaKnown RBP eCLIP13.87□□□□□ -0.19
UBR1-206ENST00000566493 IL25Q9H293 177 aa13.87□□□□□ -0.19
UBR1-206ENST00000566493 PXMP2Q9NR77 195 aa13.87□□□□□ -0.19
UBR1-206ENST00000566493 MAD2L2Q9UI95 211 aa13.87□□□□□ -0.19
UBR1-206ENST00000566493 PCDHA11Q9Y5I1 949 aa13.87□□□□□ -0.19
UBR1-206ENST00000566493 PCDHA1Q9Y5I3 950 aa13.87□□□□□ -0.19
UBR1-206ENST00000566493 MRVI1Q9Y6F6 885 aa13.87□□□□□ -0.19
UBR1-206ENST00000566493 PALM3A6NDB9 673 aaPredicted RBP13.86□□□□□ -0.19
UBR1-206ENST00000566493 IQCF3P0C7M6 154 aa13.86□□□□□ -0.19
UBR1-206ENST00000566493 MYCLP12524 364 aaPredicted RBP13.86□□□□□ -0.19
UBR1-206ENST00000566493 IGFBP4P22692 258 aa13.86□□□□□ -0.19
UBR1-206ENST00000566493 CHMLP26374 656 aa13.86□□□□□ -0.19
UBR1-206ENST00000566493 HSD17B4P51659 736 aa13.86□□□□□ -0.19
UBR1-206ENST00000566493 LAMC2Q13753 1193 aa13.86□□□□□ -0.19
UBR1-206ENST00000566493 WTAPQ15007 396 aa13.86□□□□□ -0.19
UBR1-206ENST00000566493 PPP2R2DQ66LE6 453 aa13.86□□□□□ -0.19
UBR1-206ENST00000566493 KCNV1Q6PIU1 500 aa13.86□□□□□ -0.19
UBR1-206ENST00000566493 HOMER1Q86YM7 354 aa13.86□□□□□ -0.19
UBR1-206ENST00000566493 SAMD3Q8N6K7 520 aa13.86□□□□□ -0.19
UBR1-206ENST00000566493 NCOA7Q8NI08 942 aa13.86□□□□□ -0.19
UBR1-206ENST00000566493 KATNAL1Q9BW62 490 aa13.86□□□□□ -0.19
UBR1-206ENST00000566493 DDX41Q9UJV9 622 aaKnown RBP13.86□□□□□ -0.19
UBR1-206ENST00000566493 YBX2Q9Y2T7 364 aaKnown RBP13.86□□□□□ -0.19
UBR1-206ENST00000566493 SCN5AQ14524 2016 aa13.86□□□□□ -0.19
UBR1-206ENST00000566493 GALR2O43603 387 aaPredicted RBP13.85□□□□□ -0.19
UBR1-206ENST00000566493 CYP21A2P08686 494 aa13.85□□□□□ -0.19
UBR1-206ENST00000566493 PTH1RQ03431 593 aa13.85□□□□□ -0.19
UBR1-206ENST00000566493 GRM4Q14833 912 aa13.85□□□□□ -0.19
UBR1-206ENST00000566493 TMEM67Q5HYA8 995 aa13.85□□□□□ -0.19
UBR1-206ENST00000566493 SESTD1Q86VW0 696 aa13.85□□□□□ -0.19
UBR1-206ENST00000566493 DHX37Q8IY37 1157 aaKnown RBP13.85□□□□□ -0.19
UBR1-206ENST00000566493 C7orf31Q8N865 590 aa13.85□□□□□ -0.19
UBR1-206ENST00000566493 USP38Q8NB14 1042 aa13.85□□□□□ -0.19
UBR1-206ENST00000566493 CAGE1Q8TC20 777 aa13.85□□□□□ -0.19
UBR1-206ENST00000566493 AFAP1L1Q8TED9 768 aa13.85□□□□□ -0.19
UBR1-206ENST00000566493 EMID1Q96A84 441 aaPredicted RBP13.85□□□□□ -0.19
UBR1-206ENST00000566493 MTMR8Q96EF0 704 aa13.85□□□□□ -0.19
UBR1-206ENST00000566493 SLC9A7Q96T83 725 aa13.85□□□□□ -0.19
UBR1-206ENST00000566493 MYH7BA7E2Y1 1941 aa13.85□□□□□ -0.19
UBR1-206ENST00000566493 PRUNE2Q8WUY3 3088 aa13.84□□□□□ -0.19
UBR1-206ENST00000566493 KIF28PB7ZC32 967 aa13.84□□□□□ -0.19
UBR1-206ENST00000566493 E7EWF7 191 aa13.84□□□□□ -0.19
UBR1-206ENST00000566493 GCOM1H8Y6P7 765 aaPredicted RBP13.84□□□□□ -0.19
UBR1-206ENST00000566493 POLR2MP0CAP2 368 aa13.84□□□□□ -0.19
UBR1-206ENST00000566493 HOXA13P31271 388 aaPredicted RBP13.84□□□□□ -0.19
UBR1-206ENST00000566493 PSEN2P49810 448 aa13.84□□□□□ -0.19
UBR1-206ENST00000566493 GHRHRQ02643 423 aa13.84□□□□□ -0.19
UBR1-206ENST00000566493 GDF6Q6KF10 455 aaPredicted RBP13.84□□□□□ -0.19
UBR1-206ENST00000566493 STOX1Q6ZVD7 989 aa13.84□□□□□ -0.19
UBR1-206ENST00000566493 CATIPQ7Z7H3 387 aa13.84□□□□□ -0.19
UBR1-206ENST00000566493 PHOSPHO2Q8TCD6 241 aa13.84□□□□□ -0.19
UBR1-206ENST00000566493 VWCEQ96DN2 955 aa13.84□□□□□ -0.19
UBR1-206ENST00000566493 PIGSQ96S52 555 aa13.84□□□□□ -0.19
UBR1-206ENST00000566493 PDCD2LQ9BRP1 358 aa13.84□□□□□ -0.19
UBR1-206ENST00000566493 ALG1Q9BT22 464 aa13.84□□□□□ -0.19
UBR1-206ENST00000566493 TANC1Q9C0D5 1861 aa13.84□□□□□ -0.19
UBR1-206ENST00000566493 TRIP12Q14669 1992 aaPredicted RBP13.83□□□□□ -0.19
UBR1-206ENST00000566493 PNMA6FA0A0J9YX94 578 aa13.83□□□□□ -0.2
UBR1-206ENST00000566493 OPLAHO14841 1288 aa13.83□□□□□ -0.2
UBR1-206ENST00000566493 PPP1R11O60927 126 aaPredicted RBP13.83□□□□□ -0.2
UBR1-206ENST00000566493 PARNO95453 639 aaKnown RBP13.83□□□□□ -0.2
UBR1-206ENST00000566493 MYOGP15173 224 aa13.83□□□□□ -0.2
UBR1-206ENST00000566493 CCND2P30279 289 aa13.83□□□□□ -0.2
UBR1-206ENST00000566493 KCNJ6P48051 423 aa13.83□□□□□ -0.2
UBR1-206ENST00000566493 PGM5Q15124 567 aa13.83□□□□□ -0.2
UBR1-206ENST00000566493 CCDC85BQ15834 202 aaPredicted RBP13.83□□□□□ -0.2
UBR1-206ENST00000566493 TJAP1Q5JTD0 557 aa13.83□□□□□ -0.2
UBR1-206ENST00000566493 FCHSD1Q86WN1 690 aa13.83□□□□□ -0.2
UBR1-206ENST00000566493 PPTC7Q8NI37 304 aa13.83□□□□□ -0.2
UBR1-206ENST00000566493 KAT2BQ92831 832 aa13.83□□□□□ -0.2
UBR1-206ENST00000566493 RIOX1Q9H6W3 641 aa13.83□□□□□ -0.2
UBR1-206ENST00000566493 MYO9BQ13459 2157 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms