RNA–Protein interactions for RNA: ENST00000566233.5

RAB11A-205, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 4

Gene RAB11A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-205ENST00000566233 TRAF1Q13077 416 aa13.82□□□□□ -0.2
RAB11A-205ENST00000566233 PGM5Q15124 567 aa13.82□□□□□ -0.2
RAB11A-205ENST00000566233 NBPF20Q3BBV1 942 aa13.82□□□□□ -0.2
RAB11A-205ENST00000566233 NFXL1Q6ZNB6 911 aa13.82□□□□□ -0.2
RAB11A-205ENST00000566233 RAB11FIP4Q86YS3 637 aa13.82□□□□□ -0.2
RAB11A-205ENST00000566233 TMEM199Q8N511 208 aa13.82□□□□□ -0.2
RAB11A-205ENST00000566233 SAMD3Q8N6K7 520 aa13.82□□□□□ -0.2
RAB11A-205ENST00000566233 AFG1LQ8WV93 481 aa13.82□□□□□ -0.2
RAB11A-205ENST00000566233 GUCD1Q96NT3 240 aa13.82□□□□□ -0.2
RAB11A-205ENST00000566233 DDX41Q9UJV9 622 aaKnown RBP13.82□□□□□ -0.2
RAB11A-205ENST00000566233 FRMPD4Q14CM0 1322 aa13.82□□□□□ -0.2
RAB11A-205ENST00000566233 TANC1Q9C0D5 1861 aa13.81□□□□□ -0.2
RAB11A-205ENST00000566233 CCDC69A6NI79 296 aa13.81□□□□□ -0.2
RAB11A-205ENST00000566233 KPNA6O60684 536 aa13.81□□□□□ -0.2
RAB11A-205ENST00000566233 ACRP10323 421 aa13.81□□□□□ -0.2
RAB11A-205ENST00000566233 TMEM240Q5SV17 173 aa13.81□□□□□ -0.2
RAB11A-205ENST00000566233 RASIP1Q5U651 963 aa13.81□□□□□ -0.2
RAB11A-205ENST00000566233 RASEFQ8IZ41 740 aa13.81□□□□□ -0.2
RAB11A-205ENST00000566233 SRBD1Q8N5C6 995 aaKnown RBP13.81□□□□□ -0.2
RAB11A-205ENST00000566233 EMID1Q96A84 441 aaPredicted RBP13.81□□□□□ -0.2
RAB11A-205ENST00000566233 FAM161BQ96MY7 647 aa13.81□□□□□ -0.2
RAB11A-205ENST00000566233 MRVI1Q9Y6F6 885 aa13.81□□□□□ -0.2
RAB11A-205ENST00000566233 CHD7Q9P2D1 2997 aa13.81□□□□□ -0.2
RAB11A-205ENST00000566233 PRUNE2Q8WUY3 3088 aa13.81□□□□□ -0.2
RAB11A-205ENST00000566233 CYP2C9P11712 490 aa13.8□□□□□ -0.2
RAB11A-205ENST00000566233 MYCLP12524 364 aaPredicted RBP13.8□□□□□ -0.2
RAB11A-205ENST00000566233 SMARCA1P28370 1054 aa13.8□□□□□ -0.2
RAB11A-205ENST00000566233 CCL23P55773 120 aa13.8□□□□□ -0.2
RAB11A-205ENST00000566233 FAM47CQ5HY64 1035 aa13.8□□□□□ -0.2
RAB11A-205ENST00000566233 ZNF697Q5TEC3 545 aa13.8□□□□□ -0.2
RAB11A-205ENST00000566233 RNF20Q5VTR2 975 aa13.8□□□□□ -0.2
RAB11A-205ENST00000566233 NFRKBQ6P4R8 1299 aa13.8□□□□□ -0.2
RAB11A-205ENST00000566233 PSRC1Q6PGN9 363 aaPredicted RBP13.8□□□□□ -0.2
RAB11A-205ENST00000566233 VSIG10LQ86VR7 867 aa13.8□□□□□ -0.2
RAB11A-205ENST00000566233 SGMS1Q86VZ5 419 aa13.8□□□□□ -0.2
RAB11A-205ENST00000566233 FCHSD1Q86WN1 690 aa13.8□□□□□ -0.2
RAB11A-205ENST00000566233 CMTR1Q8N1G2 835 aaKnown RBP13.8□□□□□ -0.2
RAB11A-205ENST00000566233 TMTC2Q8N394 836 aa13.8□□□□□ -0.2
RAB11A-205ENST00000566233 KAT2BQ92831 832 aa13.8□□□□□ -0.2
RAB11A-205ENST00000566233 RRP36Q96EU6 259 aaKnown RBP13.8□□□□□ -0.2
RAB11A-205ENST00000566233 LZTS2Q9BRK4 669 aa13.8□□□□□ -0.2
RAB11A-205ENST00000566233 TTYH1Q9H313 450 aaPredicted RBP13.8□□□□□ -0.2
RAB11A-205ENST00000566233 IL23AQ9NPF7 189 aa13.8□□□□□ -0.2
RAB11A-205ENST00000566233 STXBP5LQ9Y2K9 1186 aa13.8□□□□□ -0.2
RAB11A-205ENST00000566233 CALM1P0DP23 149 aa13.79□□□□□ -0.2
RAB11A-205ENST00000566233 CALM2P0DP24 149 aa13.79□□□□□ -0.2
RAB11A-205ENST00000566233 CALM3P0DP25 149 aa13.79□□□□□ -0.2
RAB11A-205ENST00000566233 UBA1P22314 1058 aaKnown RBP13.79□□□□□ -0.2
RAB11A-205ENST00000566233 CCND2P30279 289 aa13.79□□□□□ -0.2
RAB11A-205ENST00000566233 GNAQP50148 359 aa13.79□□□□□ -0.2
RAB11A-205ENST00000566233 ADCK5Q3MIX3 580 aa13.79□□□□□ -0.2
RAB11A-205ENST00000566233 TMTC3Q6ZXV5 915 aa13.79□□□□□ -0.2
RAB11A-205ENST00000566233 ZNF365Q70YC5 407 aa13.79□□□□□ -0.2
RAB11A-205ENST00000566233 MICU3Q86XE3 530 aa13.79□□□□□ -0.2
RAB11A-205ENST00000566233 PPTC7Q8NI37 304 aa13.79□□□□□ -0.2
RAB11A-205ENST00000566233 GPKOWQ92917 476 aaPredicted RBP eCLIP13.79□□□□□ -0.23e-8■□□□□ 9.8
RAB11A-205ENST00000566233 VWCEQ96DN2 955 aa13.79□□□□□ -0.2
RAB11A-205ENST00000566233 ZFP91Q96JP5 570 aaPredicted RBP13.79□□□□□ -0.2
RAB11A-205ENST00000566233 TCEANC2Q96MN5 208 aa13.79□□□□□ -0.2
RAB11A-205ENST00000566233 NEK1Q96PY6 1258 aa13.79□□□□□ -0.2
RAB11A-205ENST00000566233 SEC63Q9UGP8 760 aaKnown RBP13.79□□□□□ -0.2
RAB11A-205ENST00000566233 SLC12A7Q9Y666 1083 aa13.79□□□□□ -0.2
RAB11A-205ENST00000566233 hCG_1642624A0A1W2PR95 340 aa13.78□□□□□ -0.2
RAB11A-205ENST00000566233 SORBS3O60504 671 aa13.78□□□□□ -0.2
RAB11A-205ENST00000566233 SUPT20HL2P0C7V6 817 aa13.78□□□□□ -0.2
RAB11A-205ENST00000566233 ZNF286BP0CG31 522 aa13.78□□□□□ -0.2
RAB11A-205ENST00000566233 HOXD8P13378 290 aaPredicted RBP13.78□□□□□ -0.2
RAB11A-205ENST00000566233 MRPS9P82933 396 aaKnown RBP13.78□□□□□ -0.2
RAB11A-205ENST00000566233 PTPN11Q06124 597 aaPredicted RBP13.78□□□□□ -0.2
RAB11A-205ENST00000566233 LAMC2Q13753 1193 aa13.78□□□□□ -0.2
RAB11A-205ENST00000566233 TSGA10IPQ3SY00 556 aa13.78□□□□□ -0.2
RAB11A-205ENST00000566233 APOA5Q6Q788 366 aa13.78□□□□□ -0.2
RAB11A-205ENST00000566233 SCLYQ96I15 445 aa13.78□□□□□ -0.2
RAB11A-205ENST00000566233 CTAGE1Q96RT6 745 aa13.78□□□□□ -0.2
RAB11A-205ENST00000566233 PIK3CDO00329 1044 aa13.77□□□□□ -0.21
RAB11A-205ENST00000566233 MEIS2O14770 477 aa13.77□□□□□ -0.21
RAB11A-205ENST00000566233 GGPS1O95749 300 aa13.77□□□□□ -0.21
RAB11A-205ENST00000566233 F2P00734 622 aa13.77□□□□□ -0.21
RAB11A-205ENST00000566233 CASTP20810 708 aaKnown RBP13.77□□□□□ -0.21
RAB11A-205ENST00000566233 DNAJB2P25686 324 aa13.77□□□□□ -0.21
RAB11A-205ENST00000566233 CHMP4BP1P59074 171 aa13.77□□□□□ -0.21
RAB11A-205ENST00000566233 EXOSC10Q01780 885 aaKnown RBP13.77□□□□□ -0.21
RAB11A-205ENST00000566233 SP2Q02086 613 aa13.77□□□□□ -0.21
RAB11A-205ENST00000566233 SCN5AQ14524 2016 aa13.77□□□□□ -0.21
RAB11A-205ENST00000566233 DGKDQ16760 1214 aa13.77□□□□□ -0.21
RAB11A-205ENST00000566233 CELF3Q5SZQ8 465 aaKnown RBP13.77□□□□□ -0.21
RAB11A-205ENST00000566233 MYSM1Q5VVJ2 828 aa13.77□□□□□ -0.21
RAB11A-205ENST00000566233 USP17L6PQ6QN14 398 aa13.77□□□□□ -0.21
RAB11A-205ENST00000566233 SESTD1Q86VW0 696 aa13.77□□□□□ -0.21
RAB11A-205ENST00000566233 DHX37Q8IY37 1157 aaKnown RBP13.77□□□□□ -0.21
RAB11A-205ENST00000566233 FANCBQ8NB91 859 aa13.77□□□□□ -0.21
RAB11A-205ENST00000566233 CNTNAP5Q8WYK1 1306 aa13.77□□□□□ -0.21
RAB11A-205ENST00000566233 HERVK_113Q902F9 699 aa13.77□□□□□ -0.21
RAB11A-205ENST00000566233 INPP4AQ96PE3 977 aaPredicted RBP13.77□□□□□ -0.21
RAB11A-205ENST00000566233 SEMA6BQ9H3T3 888 aa13.77□□□□□ -0.21
RAB11A-205ENST00000566233 CXXC1Q9P0U4 656 aaPredicted RBP13.77□□□□□ -0.21
RAB11A-205ENST00000566233 TMEM265A0A087WTH1 108 aa13.76□□□□□ -0.21
RAB11A-205ENST00000566233 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.76□□□□□ -0.21
RAB11A-205ENST00000566233 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.76□□□□□ -0.21
RAB11A-205ENST00000566233 GRXCR1A8MXD5 290 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms