RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 MSLNLQ96KJ4 702 aa19.83■□□□□ 0.77
CLK3-217ENST00000566126 MKNK2Q9HBH9 465 aa19.83■□□□□ 0.77
CLK3-217ENST00000566126 MTMR4Q9NYA4 1195 aa19.83■□□□□ 0.77
CLK3-217ENST00000566126 CACNA1GO43497 2377 aa19.82■□□□□ 0.76
CLK3-217ENST00000566126 LOC102724159A0A0B4J2E5 919 aa19.82■□□□□ 0.76
CLK3-217ENST00000566126 GALR2O43603 387 aaPredicted RBP19.82■□□□□ 0.76
CLK3-217ENST00000566126 EYA4O95677 639 aa19.82■□□□□ 0.76
CLK3-217ENST00000566126 PWP2Q15269 919 aaKnown RBP19.82■□□□□ 0.76
CLK3-217ENST00000566126 FAM160B2Q86V87 743 aa19.82■□□□□ 0.76
CLK3-217ENST00000566126 STAG1Q8WVM7 1258 aa19.82■□□□□ 0.76
CLK3-217ENST00000566126 YME1L1Q96TA2 773 aa19.82■□□□□ 0.76
CLK3-217ENST00000566126 C1orf115Q9H7X2 142 aa19.82■□□□□ 0.76
CLK3-217ENST00000566126 ARPP21Q9UBL0 812 aaPredicted RBP19.82■□□□□ 0.76
CLK3-217ENST00000566126 ADD3Q9UEY8 706 aaKnown RBP19.82■□□□□ 0.76
CLK3-217ENST00000566126 GTF2IRD1Q9UHL9 959 aa19.82■□□□□ 0.76
CLK3-217ENST00000566126 MYH7P12883 1935 aa19.82■□□□□ 0.76
CLK3-217ENST00000566126 NCOR2Q9Y618 2525 aa19.81■□□□□ 0.76
CLK3-217ENST00000566126 GRM6O15303 877 aa19.81■□□□□ 0.76
CLK3-217ENST00000566126 KDM4AO75164 1064 aa19.81■□□□□ 0.76
CLK3-217ENST00000566126 PDGFBP01127 241 aaPredicted RBP19.81■□□□□ 0.76
CLK3-217ENST00000566126 NUBP1P53384 320 aa19.81■□□□□ 0.76
CLK3-217ENST00000566126 ADAM15Q13444 863 aa19.81■□□□□ 0.76
CLK3-217ENST00000566126 CHURC1Q8WUH1 139 aa19.81■□□□□ 0.76
CLK3-217ENST00000566126 TOP1MTQ969P6 601 aa19.81■□□□□ 0.76
CLK3-217ENST00000566126 IGFLR1Q9H665 355 aa19.81■□□□□ 0.76
CLK3-217ENST00000566126 ARIH2O95376 493 aa19.8■□□□□ 0.76
CLK3-217ENST00000566126 TTLL1O95922 423 aa19.8■□□□□ 0.76
CLK3-217ENST00000566126 SCFD2Q8WU76 684 aa19.8■□□□□ 0.76
CLK3-217ENST00000566126 CHMP4CQ96CF2 233 aa19.8■□□□□ 0.76
CLK3-217ENST00000566126 LMAN2LQ9H0V9 348 aa19.8■□□□□ 0.76
CLK3-217ENST00000566126 HDAC6Q9UBN7 1215 aa19.8■□□□□ 0.76
CLK3-217ENST00000566126 ISY1Q9ULR0 285 aaKnown RBP19.8■□□□□ 0.76
CLK3-217ENST00000566126 C5orf67F2Z3F1 127 aa19.79■□□□□ 0.76
CLK3-217ENST00000566126 MMP3P08254 477 aa19.79■□□□□ 0.76
CLK3-217ENST00000566126 LINC00271P0C7V0 271 aa19.79■□□□□ 0.76
CLK3-217ENST00000566126 TXNP10599 105 aaKnown RBP19.79■□□□□ 0.76
CLK3-217ENST00000566126 IKQ13123 557 aaPredicted RBP19.79■□□□□ 0.76
CLK3-217ENST00000566126 PTK7Q13308 1070 aa19.79■□□□□ 0.76
CLK3-217ENST00000566126 SBK1Q52WX2 424 aa19.79■□□□□ 0.76
CLK3-217ENST00000566126 ADSSL1Q8N142 457 aa19.79■□□□□ 0.76
CLK3-217ENST00000566126 AFG1LQ8WV93 481 aa19.79■□□□□ 0.76
CLK3-217ENST00000566126 CLUAP1Q96AJ1 413 aa19.79■□□□□ 0.76
CLK3-217ENST00000566126 CLEC1BQ9P126 229 aa19.79■□□□□ 0.76
CLK3-217ENST00000566126 CCPG1Q9ULG6 757 aa19.79■□□□□ 0.76
CLK3-217ENST00000566126 TPRP12270 2363 aaKnown RBP19.78■□□□□ 0.76
CLK3-217ENST00000566126 PLA2G6O60733 806 aa19.78■□□□□ 0.76
CLK3-217ENST00000566126 UPP2O95045 317 aa19.78■□□□□ 0.76
CLK3-217ENST00000566126 CTNNB1P35222 781 aa19.78■□□□□ 0.76
CLK3-217ENST00000566126 RRP1P56182 461 aaKnown RBP19.78■□□□□ 0.76
CLK3-217ENST00000566126 SMRP1Q8NCR6 262 aa19.78■□□□□ 0.76
CLK3-217ENST00000566126 GMCL1Q96IK5 515 aa19.78■□□□□ 0.76
CLK3-217ENST00000566126 IL1RAPL2Q9NP60 686 aa19.78■□□□□ 0.76
CLK3-217ENST00000566126 PRR12Q9ULL5 1215 aa19.78■□□□□ 0.76
CLK3-217ENST00000566126 NFIBO00712 420 aa19.77■□□□□ 0.76
CLK3-217ENST00000566126 PRDM1O75626 825 aa19.77■□□□□ 0.76
CLK3-217ENST00000566126 EDNRBP24530 442 aa19.77■□□□□ 0.76
CLK3-217ENST00000566126 NDUFV1P49821 464 aa19.77■□□□□ 0.76
CLK3-217ENST00000566126 PDE4BQ07343 736 aa19.77■□□□□ 0.76
CLK3-217ENST00000566126 PLEKHG4Q58EX7 1191 aa19.77■□□□□ 0.76
CLK3-217ENST00000566126 SLC30A10Q6XR72 485 aa19.77■□□□□ 0.76
CLK3-217ENST00000566126 FRMD5Q7Z6J6 570 aa19.77■□□□□ 0.76
CLK3-217ENST00000566126 NKD2Q969F2 451 aaPredicted RBP19.77■□□□□ 0.76
CLK3-217ENST00000566126 PUS7LQ9H0K6 701 aaKnown RBP19.77■□□□□ 0.76
CLK3-217ENST00000566126 INCENPQ9NQS7 918 aa19.77■□□□□ 0.76
CLK3-217ENST00000566126 EXOC6BQ9Y2D4 811 aa19.77■□□□□ 0.76
CLK3-217ENST00000566126 EMSYQ7Z589 1322 aa19.76■□□□□ 0.75
CLK3-217ENST00000566126 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.76■□□□□ 0.75
CLK3-217ENST00000566126 ICAM1P05362 532 aa19.76■□□□□ 0.75
CLK3-217ENST00000566126 RB1P06400 928 aa19.76■□□□□ 0.75
CLK3-217ENST00000566126 MCCP23508 829 aa19.76■□□□□ 0.75
CLK3-217ENST00000566126 SLC1A4P43007 532 aa19.76■□□□□ 0.75
CLK3-217ENST00000566126 ZNF200P98182 395 aaPredicted RBP19.76■□□□□ 0.75
CLK3-217ENST00000566126 PDE4DQ08499 809 aa19.76■□□□□ 0.75
CLK3-217ENST00000566126 KCTD1Q719H9 257 aa19.76■□□□□ 0.75
CLK3-217ENST00000566126 TMEM57Q8N5G2 664 aa19.76■□□□□ 0.75
CLK3-217ENST00000566126 PAG1Q9NWQ8 432 aa19.76■□□□□ 0.75
CLK3-217ENST00000566126 MINDY4BA8MYZ0 360 aa19.75■□□□□ 0.75
CLK3-217ENST00000566126 CSPG5O95196 566 aa19.75■□□□□ 0.75
CLK3-217ENST00000566126 ICAM3P32942 547 aa19.75■□□□□ 0.75
CLK3-217ENST00000566126 BMPR1AP36894 532 aa19.75■□□□□ 0.75
CLK3-217ENST00000566126 COASYQ13057 564 aa19.75■□□□□ 0.75
CLK3-217ENST00000566126 CAMK1Q14012 370 aa19.75■□□□□ 0.75
CLK3-217ENST00000566126 HIC1Q14526 733 aa19.75■□□□□ 0.75
CLK3-217ENST00000566126 UBE3CQ15386 1083 aa19.75■□□□□ 0.75
CLK3-217ENST00000566126 CCDC62Q6P9F0 684 aa19.75■□□□□ 0.75
CLK3-217ENST00000566126 RASGRP2Q7LDG7 609 aa19.75■□□□□ 0.75
CLK3-217ENST00000566126 C7orf31Q8N865 590 aa19.75■□□□□ 0.75
CLK3-217ENST00000566126 RIPOR3Q96MK2 946 aa19.75■□□□□ 0.75
CLK3-217ENST00000566126 C11orf84Q9BUA3 381 aaPredicted RBP19.75■□□□□ 0.75
CLK3-217ENST00000566126 PHF7Q9BWX1 381 aaPredicted RBP19.75■□□□□ 0.75
CLK3-217ENST00000566126 USP15Q9Y4E8 981 aaPredicted RBP19.75■□□□□ 0.75
CLK3-217ENST00000566126 EP300Q09472 2414 aaPredicted RBP19.74■□□□□ 0.75
CLK3-217ENST00000566126 PLIN4Q96Q06 1357 aa19.74■□□□□ 0.75
CLK3-217ENST00000566126 PTPDC1A2A3K4 754 aa19.74■□□□□ 0.75
CLK3-217ENST00000566126 ARHGAP1Q07960 439 aa19.74■□□□□ 0.75
CLK3-217ENST00000566126 PTPN21Q16825 1174 aa19.74■□□□□ 0.75
CLK3-217ENST00000566126 ZNF444Q8N0Y2 327 aaPredicted RBP19.74■□□□□ 0.75
CLK3-217ENST00000566126 FIBCD1Q8N539 461 aa19.74■□□□□ 0.75
CLK3-217ENST00000566126 RMDN1Q96DB5 314 aa19.74■□□□□ 0.75
CLK3-217ENST00000566126 RPGRIP1Q96KN7 1286 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms