RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 FARP2O94887 1054 aaPredicted RBP14.4□□□□□ -0.1
SHCBP1-204ENST00000565887 CTDNEP1O95476 244 aa14.4□□□□□ -0.1
SHCBP1-204ENST00000565887 TXNP10599 105 aaKnown RBP14.4□□□□□ -0.1
SHCBP1-204ENST00000565887 GJA9P57773 515 aa14.4□□□□□ -0.1
SHCBP1-204ENST00000565887 TRIM29Q14134 588 aa14.4□□□□□ -0.1
SHCBP1-204ENST00000565887 FBXO16Q8IX29 292 aaPredicted RBP14.4□□□□□ -0.1
SHCBP1-204ENST00000565887 NSUN7Q8NE18 718 aaKnown RBP14.4□□□□□ -0.1
SHCBP1-204ENST00000565887 UPF3AQ9H1J1 476 aaKnown RBP14.4□□□□□ -0.1
SHCBP1-204ENST00000565887 PCDHA4Q9UN74 947 aa14.4□□□□□ -0.1
SHCBP1-204ENST00000565887 GNEQ9Y223 722 aaKnown RBP14.4□□□□□ -0.1
SHCBP1-204ENST00000565887 CENPFP49454 3210 aa14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 KPNA6O60684 536 aa14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 CST5P28325 142 aaPredicted RBP14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 ICAM3P32942 547 aa14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 ADCYAP1R1P41586 468 aa14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 LRRC41Q15345 812 aa14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 UBE2SQ16763 222 aa14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 SEPT14Q6ZU15 432 aa14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 CCDC83Q8IWF9 413 aa14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 BLIDQ8IZY5 108 aa14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 DAGLBQ8NCG7 672 aa14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 GIMAP8Q8ND71 665 aaPredicted RBP14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 ALG1Q9BT22 464 aa14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 HTATIP2Q9BUP3 242 aa14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 SEZ6LQ9BYH1 1024 aa14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 BRMS1Q9HCU9 246 aa14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 PDGFCQ9NRA1 345 aa14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 VPS54Q9P1Q0 977 aa14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 MRVI1Q9Y6F6 885 aa14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 MCM3APO60318 1980 aa14.39□□□□□ -0.11
SHCBP1-204ENST00000565887 MOXD2PA6NHM9 499 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 DYNC1LI2O43237 492 aaPredicted RBP14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 LARGE1O95461 756 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 CYP3A4P08684 503 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 SMPD1P17405 629 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 SREBF1P36956 1147 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 CPT1AP50416 773 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 USP11P51784 963 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 LAMC2Q13753 1193 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 NEDD9Q14511 834 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 GNASQ5JWF2 1037 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 CCDC62Q6P9F0 684 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 TLK2Q86UE8 772 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 FAM184AQ8NB25 1140 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 KLHDC9Q8NEP7 349 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 GPRASP2Q96D09 838 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 SHISA4Q96DD7 197 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 TMX3Q96JJ7 454 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 INPP4AQ96PE3 977 aaPredicted RBP14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 SENP7Q9BQF6 1050 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 PHF20Q9BVI0 1012 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 DDX41Q9UJV9 622 aaKnown RBP14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 LCTP09848 1927 aa14.38□□□□□ -0.11
SHCBP1-204ENST00000565887 SPATA31C2B4DYI2 1134 aa14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 FIBPO43427 364 aa14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 PPFIA3O75145 1194 aa14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 ADAMTS4O75173 837 aa14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 CABYRO75952 493 aa14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 PGK1P00558 417 aa14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 GH1P01241 217 aa14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 C6orf222P0C671 652 aaPredicted RBP14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 FDPSP14324 419 aaKnown RBP14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 ZNF76P36508 570 aa14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 MRPS9P82933 396 aaKnown RBP14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 SAFBQ15424 915 aaKnown RBP eCLIP14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 JAKMIP3Q5VZ66 844 aa14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 ANO1Q5XXA6 986 aa14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 NIPA1Q7RTP0 329 aa14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 UBE2Q1Q7Z7E8 422 aa14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 EMID1Q96A84 441 aaPredicted RBP14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 PAWRQ96IZ0 340 aaKnown RBP14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 ANO3Q9BYT9 981 aa14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 C11orf49Q9H6J7 331 aa14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 SYNRGQ9UMZ2 1314 aa14.37□□□□□ -0.11
SHCBP1-204ENST00000565887 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.36□□□□□ -0.11
SHCBP1-204ENST00000565887 ARHGAP4P98171 946 aa14.36□□□□□ -0.11
SHCBP1-204ENST00000565887 MLLT1Q03111 559 aaPredicted RBP14.36□□□□□ -0.11
SHCBP1-204ENST00000565887 FSCN1Q16658 493 aaKnown RBP14.36□□□□□ -0.11
SHCBP1-204ENST00000565887 CEP55Q53EZ4 464 aa14.36□□□□□ -0.11
SHCBP1-204ENST00000565887 GJC2Q5T442 439 aaPredicted RBP14.36□□□□□ -0.11
SHCBP1-204ENST00000565887 KRT25Q7Z3Z0 450 aa14.36□□□□□ -0.11
SHCBP1-204ENST00000565887 DHX37Q8IY37 1157 aaKnown RBP14.36□□□□□ -0.11
SHCBP1-204ENST00000565887 OR6J1Q8NGC5 347 aa14.36□□□□□ -0.11
SHCBP1-204ENST00000565887 NAP1L4Q99733 375 aaKnown RBP14.36□□□□□ -0.11
SHCBP1-204ENST00000565887 MXRA8Q9BRK3 442 aa14.36□□□□□ -0.11
SHCBP1-204ENST00000565887 JADE2Q9NQC1 790 aa14.36□□□□□ -0.11
SHCBP1-204ENST00000565887 POLR3EQ9NVU0 708 aa14.36□□□□□ -0.11
SHCBP1-204ENST00000565887 PHF24Q9UPV7 400 aa14.36□□□□□ -0.11
SHCBP1-204ENST00000565887 UBIAD1Q9Y5Z9 338 aa14.36□□□□□ -0.11
SHCBP1-204ENST00000565887 A6NJR5 290 aa14.35□□□□□ -0.11
SHCBP1-204ENST00000565887 MYCNP04198 464 aaPredicted RBP14.35□□□□□ -0.11
SHCBP1-204ENST00000565887 COL6A1P12109 1028 aa14.35□□□□□ -0.11
SHCBP1-204ENST00000565887 MNX1P50219 401 aaPredicted RBP14.35□□□□□ -0.11
SHCBP1-204ENST00000565887 KCNA10Q16322 511 aa14.35□□□□□ -0.11
SHCBP1-204ENST00000565887 LY6KQ17RY6 165 aa14.35□□□□□ -0.11
SHCBP1-204ENST00000565887 IL31RAQ8NI17 732 aa14.35□□□□□ -0.11
SHCBP1-204ENST00000565887 SNX21Q969T3 373 aa14.35□□□□□ -0.11
SHCBP1-204ENST00000565887 GLT1D1Q96MS3 346 aa14.35□□□□□ -0.11
SHCBP1-204ENST00000565887 MLXIPQ9HAP2 919 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms