RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 CCDC69A6NI79 296 aa12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 GCOM1H8Y6P7 765 aaPredicted RBP12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 GH1P01241 217 aa12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 MMP3P08254 477 aa12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 POLR2MP0CAP2 368 aa12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 SMAD3P84022 425 aaKnown RBP12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 PPIGQ13427 754 aaKnown RBP eCLIP12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 PGM5Q15124 567 aa12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 BRDTQ58F21 947 aaPredicted RBP12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 ZNF365Q70YC5 407 aa12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 VSIG10LQ86VR7 867 aa12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 TMEM199Q8N511 208 aa12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 CTCFLQ8NI51 663 aaPredicted RBP12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 GPKOWQ92917 476 aaPredicted RBP eCLIP12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 VWCEQ96DN2 955 aa12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 SCLYQ96I15 445 aa12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 CCDC136Q96JN2 1154 aa12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 TMEM87BQ96K49 555 aa12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 TTYH1Q9H313 450 aaPredicted RBP12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 MRVI1Q9Y6F6 885 aa12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 VCANP13611 3396 aa12.66□□□□□ -0.38
NSMCE1-210ENST00000565626 GRXCR1A8MXD5 290 aa12.66□□□□□ -0.38
NSMCE1-210ENST00000565626 CDC45O75419 566 aa12.66□□□□□ -0.38
NSMCE1-210ENST00000565626 KIF5BP33176 963 aa12.66□□□□□ -0.38
NSMCE1-210ENST00000565626 LIFRP42702 1097 aa12.66□□□□□ -0.38
NSMCE1-210ENST00000565626 ADCK5Q3MIX3 580 aa12.66□□□□□ -0.38
NSMCE1-210ENST00000565626 ZNF697Q5TEC3 545 aa12.66□□□□□ -0.38
NSMCE1-210ENST00000565626 CCDC82Q8N4S0 544 aa12.66□□□□□ -0.38
NSMCE1-210ENST00000565626 KAT2BQ92831 832 aa12.66□□□□□ -0.38
NSMCE1-210ENST00000565626 MAP3K14Q99558 947 aa12.66□□□□□ -0.38
NSMCE1-210ENST00000565626 SPZ1Q9BXG8 430 aa12.66□□□□□ -0.38
NSMCE1-210ENST00000565626 SEMA6BQ9H3T3 888 aa12.66□□□□□ -0.38
NSMCE1-210ENST00000565626 BCAS3Q9H6U6 928 aa12.66□□□□□ -0.38
NSMCE1-210ENST00000565626 IL23AQ9NPF7 189 aa12.66□□□□□ -0.38
NSMCE1-210ENST00000565626 CXXC1Q9P0U4 656 aaPredicted RBP12.66□□□□□ -0.38
NSMCE1-210ENST00000565626 SCN10AQ9Y5Y9 1956 aa12.66□□□□□ -0.38
NSMCE1-210ENST00000565626 KPNA6O60684 536 aa12.65□□□□□ -0.38
NSMCE1-210ENST00000565626 ZNF286BP0CG31 522 aa12.65□□□□□ -0.38
NSMCE1-210ENST00000565626 SP2Q02086 613 aa12.65□□□□□ -0.38
NSMCE1-210ENST00000565626 RASIP1Q5U651 963 aa12.65□□□□□ -0.38
NSMCE1-210ENST00000565626 NFRKBQ6P4R8 1299 aa12.65□□□□□ -0.38
NSMCE1-210ENST00000565626 USP17L6PQ6QN14 398 aa12.65□□□□□ -0.38
NSMCE1-210ENST00000565626 MICU3Q86XE3 530 aa12.65□□□□□ -0.38
NSMCE1-210ENST00000565626 RRP36Q96EU6 259 aaKnown RBP12.65□□□□□ -0.38
NSMCE1-210ENST00000565626 MTA3Q9BTC8 594 aa12.65□□□□□ -0.38
NSMCE1-210ENST00000565626 SEZ6LQ9BYH1 1024 aa12.65□□□□□ -0.38
NSMCE1-210ENST00000565626 MAP3K20Q9NYL2 800 aaKnown RBP12.65□□□□□ -0.38
NSMCE1-210ENST00000565626 STXBP5LQ9Y2K9 1186 aa12.65□□□□□ -0.38
NSMCE1-210ENST00000565626 SLC12A7Q9Y666 1083 aa12.65□□□□□ -0.38
NSMCE1-210ENST00000565626 CUL9Q8IWT3 2517 aa12.65□□□□□ -0.38
NSMCE1-210ENST00000565626 CHD7Q9P2D1 2997 aa12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 CASTP20810 708 aaKnown RBP12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 UBA1P22314 1058 aaKnown RBP12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 CCND2P30279 289 aa12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 PBX2P40425 430 aa12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 MRPS9P82933 396 aaKnown RBP12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 EXOSC10Q01780 885 aaKnown RBP12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 TRAF1Q13077 416 aa12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 RNF20Q5VTR2 975 aa12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 PSRC1Q6PGN9 363 aaPredicted RBP12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 OTOP2Q7RTS6 562 aa12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 DHX37Q8IY37 1157 aaKnown RBP12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 TMTC2Q8N394 836 aa12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 EMID1Q96A84 441 aaPredicted RBP12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 NEK1Q96PY6 1258 aa12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 CTAGE1Q96RT6 745 aa12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 CDX2Q99626 313 aaPredicted RBP12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 RTEL1Q9NZ71 1219 aa12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 SEC63Q9UGP8 760 aaKnown RBP12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 BRPF3Q9ULD4 1205 aa12.64□□□□□ -0.39
NSMCE1-210ENST00000565626 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 MEIS2O14770 477 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 GGPS1O95749 300 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 SUPT20HL2P0C7V6 817 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 CPA1P15085 419 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 DNAJB2P25686 324 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 SMARCA1P28370 1054 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 GNAQP50148 359 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 LAMC2Q13753 1193 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 DGKDQ16760 1214 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 HSDL1Q3SXM5 330 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 CELF3Q5SZQ8 465 aaKnown RBP12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 MYSM1Q5VVJ2 828 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 GDF6Q6KF10 455 aaPredicted RBP12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 TMTC3Q6ZXV5 915 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 DEFB128Q7Z7B8 93 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 SGMS1Q86VZ5 419 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 SAMD3Q8N6K7 520 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 FANCBQ8NB91 859 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 PPTC7Q8NI37 304 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 HERVK_113Q902F9 699 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 LZTS2Q9BRK4 669 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 TELO2Q9Y4R8 837 aa12.63□□□□□ -0.39
NSMCE1-210ENST00000565626 FRMPD4Q14CM0 1322 aa12.62□□□□□ -0.39
NSMCE1-210ENST00000565626 KIAA1217Q5T5P2 1943 aa12.62□□□□□ -0.39
NSMCE1-210ENST00000565626 FGBP02675 491 aa12.62□□□□□ -0.39
NSMCE1-210ENST00000565626 CALM1P0DP23 149 aa12.62□□□□□ -0.39
NSMCE1-210ENST00000565626 CALM2P0DP24 149 aa12.62□□□□□ -0.39
NSMCE1-210ENST00000565626 CALM3P0DP25 149 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms