RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 CDX2Q99626 313 aaPredicted RBP18.16■□□□□ 0.5
CDH3-204ENST00000565453 MYL10Q9BUA6 226 aa18.16■□□□□ 0.5
CDH3-204ENST00000565453 BAZ2BQ9UIF8 2168 aaKnown RBP18.15■□□□□ 0.5
CDH3-204ENST00000565453 CYP2C9P11712 490 aa18.15■□□□□ 0.5
CDH3-204ENST00000565453 MCM5P33992 734 aa18.15■□□□□ 0.5
CDH3-204ENST00000565453 PGM5Q15124 567 aa18.15■□□□□ 0.5
CDH3-204ENST00000565453 CASC1Q6TDU7 716 aa18.15■□□□□ 0.5
CDH3-204ENST00000565453 VSIG10LQ86VR7 867 aa18.15■□□□□ 0.5
CDH3-204ENST00000565453 SLC17A8Q8NDX2 589 aa18.15■□□□□ 0.5
CDH3-204ENST00000565453 KAT2BQ92831 832 aa18.15■□□□□ 0.5
CDH3-204ENST00000565453 TMEM87BQ96K49 555 aa18.15■□□□□ 0.5
CDH3-204ENST00000565453 SPZ1Q9BXG8 430 aa18.15■□□□□ 0.5
CDH3-204ENST00000565453 GCOM1H8Y6P7 765 aaPredicted RBP18.14■□□□□ 0.49
CDH3-204ENST00000565453 POLR2MP0CAP2 368 aa18.14■□□□□ 0.49
CDH3-204ENST00000565453 DNAJB2P25686 324 aa18.14■□□□□ 0.49
CDH3-204ENST00000565453 SMARCA1P28370 1054 aa18.14■□□□□ 0.49
CDH3-204ENST00000565453 FAM47CQ5HY64 1035 aa18.14■□□□□ 0.49
CDH3-204ENST00000565453 SCLYQ96I15 445 aa18.14■□□□□ 0.49
CDH3-204ENST00000565453 ANO2Q9NQ90 1003 aa18.14■□□□□ 0.49
CDH3-204ENST00000565453 CXXC1Q9P0U4 656 aaPredicted RBP18.14■□□□□ 0.49
CDH3-204ENST00000565453 MRVI1Q9Y6F6 885 aa18.14■□□□□ 0.49
CDH3-204ENST00000565453 FRMPD4Q14CM0 1322 aa18.14■□□□□ 0.49
CDH3-204ENST00000565453 GRXCR1A8MXD5 290 aa18.13■□□□□ 0.49
CDH3-204ENST00000565453 FGBP02675 491 aa18.13■□□□□ 0.49
CDH3-204ENST00000565453 MYCLP12524 364 aaPredicted RBP18.13■□□□□ 0.49
CDH3-204ENST00000565453 LIFRP42702 1097 aa18.13■□□□□ 0.49
CDH3-204ENST00000565453 SESTD1Q86VW0 696 aa18.13■□□□□ 0.49
CDH3-204ENST00000565453 TMTC2Q8N394 836 aa18.13■□□□□ 0.49
CDH3-204ENST00000565453 CTCFLQ8NI51 663 aaPredicted RBP18.13■□□□□ 0.49
CDH3-204ENST00000565453 CTAGE1Q96RT6 745 aa18.13■□□□□ 0.49
CDH3-204ENST00000565453 PLEKHA8P1O95397 391 aa18.12■□□□□ 0.49
CDH3-204ENST00000565453 HOXD8P13378 290 aaPredicted RBP18.12■□□□□ 0.49
CDH3-204ENST00000565453 CASTP20810 708 aaKnown RBP18.12■□□□□ 0.49
CDH3-204ENST00000565453 CCND2P30279 289 aa18.12■□□□□ 0.49
CDH3-204ENST00000565453 KIF5BP33176 963 aa18.12■□□□□ 0.49
CDH3-204ENST00000565453 PBX2P40425 430 aa18.12■□□□□ 0.49
CDH3-204ENST00000565453 LAMC2Q13753 1193 aa18.12■□□□□ 0.49
CDH3-204ENST00000565453 FCHSD1Q86WN1 690 aa18.12■□□□□ 0.49
CDH3-204ENST00000565453 SRBD1Q8N5C6 995 aaKnown RBP18.12■□□□□ 0.49
CDH3-204ENST00000565453 PPTC7Q8NI37 304 aa18.12■□□□□ 0.49
CDH3-204ENST00000565453 PIBF1Q8WXW3 757 aa18.12■□□□□ 0.49
CDH3-204ENST00000565453 MYLIPQ8WY64 445 aa18.12■□□□□ 0.49
CDH3-204ENST00000565453 LZTS2Q9BRK4 669 aa18.12■□□□□ 0.49
CDH3-204ENST00000565453 PBX4Q9BYU1 374 aa18.12■□□□□ 0.49
CDH3-204ENST00000565453 COL6A3P12111 3177 aa18.12■□□□□ 0.49
CDH3-204ENST00000565453 CCDC69A6NI79 296 aa18.11■□□□□ 0.49
CDH3-204ENST00000565453 SP2Q02086 613 aa18.11■□□□□ 0.49
CDH3-204ENST00000565453 DGKDQ16760 1214 aa18.11■□□□□ 0.49
CDH3-204ENST00000565453 MYSM1Q5VVJ2 828 aa18.11■□□□□ 0.49
CDH3-204ENST00000565453 KCNV1Q6PIU1 500 aa18.11■□□□□ 0.49
CDH3-204ENST00000565453 OTOP2Q7RTS6 562 aa18.11■□□□□ 0.49
CDH3-204ENST00000565453 DHX37Q8IY37 1157 aaKnown RBP18.11■□□□□ 0.49
CDH3-204ENST00000565453 RPUSD2Q8IZ73 545 aaKnown RBP18.11■□□□□ 0.49
CDH3-204ENST00000565453 GPKOWQ92917 476 aaPredicted RBP eCLIP18.11■□□□□ 0.49
CDH3-204ENST00000565453 TIFAQ96CG3 184 aa18.11■□□□□ 0.49
CDH3-204ENST00000565453 RRP36Q96EU6 259 aaKnown RBP18.11■□□□□ 0.49
CDH3-204ENST00000565453 ZFP91Q96JP5 570 aaPredicted RBP18.11■□□□□ 0.49
CDH3-204ENST00000565453 TANC1Q9C0D5 1861 aa18.1■□□□□ 0.49
CDH3-204ENST00000565453 HAS3O00219 553 aa18.1■□□□□ 0.49
CDH3-204ENST00000565453 PITPNM1O00562 1244 aa18.1■□□□□ 0.49
CDH3-204ENST00000565453 F2P00734 622 aa18.1■□□□□ 0.49
CDH3-204ENST00000565453 RXRAP19793 462 aa18.1■□□□□ 0.49
CDH3-204ENST00000565453 UBA1P22314 1058 aaKnown RBP18.1■□□□□ 0.49
CDH3-204ENST00000565453 GNAQP50148 359 aa18.1■□□□□ 0.49
CDH3-204ENST00000565453 MRPS9P82933 396 aaKnown RBP18.1■□□□□ 0.49
CDH3-204ENST00000565453 GRIN2CQ14957 1233 aa18.1■□□□□ 0.49
CDH3-204ENST00000565453 CELF3Q5SZQ8 465 aaKnown RBP18.1■□□□□ 0.49
CDH3-204ENST00000565453 GDF6Q6KF10 455 aaPredicted RBP18.1■□□□□ 0.49
CDH3-204ENST00000565453 NFXL1Q6ZNB6 911 aa18.1■□□□□ 0.49
CDH3-204ENST00000565453 SGMS1Q86VZ5 419 aa18.1■□□□□ 0.49
CDH3-204ENST00000565453 LRRC2Q9BYS8 371 aa18.1■□□□□ 0.49
CDH3-204ENST00000565453 MTIF3Q9H2K0 278 aaKnown RBP18.1■□□□□ 0.49
CDH3-204ENST00000565453 ZNF576Q9H609 170 aa18.1■□□□□ 0.49
CDH3-204ENST00000565453 LAMA2P24043 3122 aaKnown RBP18.1■□□□□ 0.49
CDH3-204ENST00000565453 GGPS1O95749 300 aa18.09■□□□□ 0.49
CDH3-204ENST00000565453 PFKMP08237 780 aa18.09■□□□□ 0.49
CDH3-204ENST00000565453 IQCF3P0C7M6 154 aa18.09■□□□□ 0.49
CDH3-204ENST00000565453 CALM1P0DP23 149 aa18.09■□□□□ 0.49
CDH3-204ENST00000565453 CALM2P0DP24 149 aa18.09■□□□□ 0.49
CDH3-204ENST00000565453 CALM3P0DP25 149 aa18.09■□□□□ 0.49
CDH3-204ENST00000565453 TGFB3P10600 412 aa18.09■□□□□ 0.49
CDH3-204ENST00000565453 RFC2P35250 354 aa18.09■□□□□ 0.49
CDH3-204ENST00000565453 PSEN2P49810 448 aa18.09■□□□□ 0.49
CDH3-204ENST00000565453 PTGISQ16647 500 aa18.09■□□□□ 0.49
CDH3-204ENST00000565453 HSDL1Q3SXM5 330 aa18.09■□□□□ 0.49
CDH3-204ENST00000565453 RAB11FIP4Q86YS3 637 aa18.09■□□□□ 0.49
CDH3-204ENST00000565453 CMTR1Q8N1G2 835 aaKnown RBP18.09■□□□□ 0.49
CDH3-204ENST00000565453 GTF2IRD1Q9UHL9 959 aa18.09■□□□□ 0.49
CDH3-204ENST00000565453 SCN5AQ14524 2016 aa18.09■□□□□ 0.49
CDH3-204ENST00000565453 MYH7BA7E2Y1 1941 aa18.08■□□□□ 0.49
CDH3-204ENST00000565453 PIK3CDO00329 1044 aa18.08■□□□□ 0.48
CDH3-204ENST00000565453 MEIS2O14770 477 aa18.08■□□□□ 0.48
CDH3-204ENST00000565453 CDC45O75419 566 aa18.08■□□□□ 0.48
CDH3-204ENST00000565453 ZNF286BP0CG31 522 aa18.08■□□□□ 0.48
CDH3-204ENST00000565453 ICAM3P32942 547 aa18.08■□□□□ 0.48
CDH3-204ENST00000565453 CHMP4BP1P59074 171 aa18.08■□□□□ 0.48
CDH3-204ENST00000565453 SEMA3FQ13275 785 aa18.08■□□□□ 0.48
CDH3-204ENST00000565453 TSGA10IPQ3SY00 556 aa18.08■□□□□ 0.48
CDH3-204ENST00000565453 USP17L6PQ6QN14 398 aa18.08■□□□□ 0.48
CDH3-204ENST00000565453 TMTC3Q6ZXV5 915 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms