RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 KPNA6O60684 536 aa11.62□□□□□ -0.55
CMTM3-209ENST00000565003 PLEKHA8P1O95397 391 aa11.62□□□□□ -0.55
CMTM3-209ENST00000565003 POLR2MP0CAP2 368 aa11.62□□□□□ -0.55
CMTM3-209ENST00000565003 MYCLP12524 364 aaPredicted RBP11.62□□□□□ -0.55
CMTM3-209ENST00000565003 RXRAP19793 462 aa11.62□□□□□ -0.55
CMTM3-209ENST00000565003 PGM5Q15124 567 aa11.62□□□□□ -0.55
CMTM3-209ENST00000565003 FAM47CQ5HY64 1035 aa11.62□□□□□ -0.55
CMTM3-209ENST00000565003 NFRKBQ6P4R8 1299 aa11.62□□□□□ -0.55
CMTM3-209ENST00000565003 FCHSD1Q86WN1 690 aa11.62□□□□□ -0.55
CMTM3-209ENST00000565003 CTCFLQ8NI51 663 aaPredicted RBP11.62□□□□□ -0.55
CMTM3-209ENST00000565003 EMID1Q96A84 441 aaPredicted RBP11.62□□□□□ -0.55
CMTM3-209ENST00000565003 VWCEQ96DN2 955 aa11.62□□□□□ -0.55
CMTM3-209ENST00000565003 SCLYQ96I15 445 aa11.62□□□□□ -0.55
CMTM3-209ENST00000565003 ZFP91Q96JP5 570 aaPredicted RBP11.62□□□□□ -0.55
CMTM3-209ENST00000565003 TMEM87BQ96K49 555 aa11.62□□□□□ -0.55
CMTM3-209ENST00000565003 MAP3K14Q99558 947 aa11.62□□□□□ -0.55
CMTM3-209ENST00000565003 CDX2Q99626 313 aaPredicted RBP11.62□□□□□ -0.55
CMTM3-209ENST00000565003 SPZ1Q9BXG8 430 aa11.62□□□□□ -0.55
CMTM3-209ENST00000565003 LRRC2Q9BYS8 371 aa11.62□□□□□ -0.55
CMTM3-209ENST00000565003 SEMA6BQ9H3T3 888 aa11.62□□□□□ -0.55
CMTM3-209ENST00000565003 MRVI1Q9Y6F6 885 aa11.62□□□□□ -0.55
CMTM3-209ENST00000565003 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.61□□□□□ -0.55
CMTM3-209ENST00000565003 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.61□□□□□ -0.55
CMTM3-209ENST00000565003 GRXCR1A8MXD5 290 aa11.61□□□□□ -0.55
CMTM3-209ENST00000565003 SUPT20HL2P0C7V6 817 aa11.61□□□□□ -0.55
CMTM3-209ENST00000565003 DNAJB2P25686 324 aa11.61□□□□□ -0.55
CMTM3-209ENST00000565003 CHMP4BP1P59074 171 aa11.61□□□□□ -0.55
CMTM3-209ENST00000565003 TRAF1Q13077 416 aa11.61□□□□□ -0.55
CMTM3-209ENST00000565003 NFXL1Q6ZNB6 911 aa11.61□□□□□ -0.55
CMTM3-209ENST00000565003 VSIG10LQ86VR7 867 aa11.61□□□□□ -0.55
CMTM3-209ENST00000565003 RAB11FIP4Q86YS3 637 aa11.61□□□□□ -0.55
CMTM3-209ENST00000565003 CMTR1Q8N1G2 835 aaKnown RBP11.61□□□□□ -0.55
CMTM3-209ENST00000565003 SAMD3Q8N6K7 520 aa11.61□□□□□ -0.55
CMTM3-209ENST00000565003 HERVK_113Q902F9 699 aa11.61□□□□□ -0.55
CMTM3-209ENST00000565003 KAT2BQ92831 832 aa11.61□□□□□ -0.55
CMTM3-209ENST00000565003 GPKOWQ92917 476 aaPredicted RBP eCLIP11.61□□□□□ -0.55
CMTM3-209ENST00000565003 CTAGE1Q96RT6 745 aa11.61□□□□□ -0.55
CMTM3-209ENST00000565003 CXXC1Q9P0U4 656 aaPredicted RBP11.61□□□□□ -0.55
CMTM3-209ENST00000565003 FRMPD4Q14CM0 1322 aa11.6□□□□□ -0.55
CMTM3-209ENST00000565003 TMEM265A0A087WTH1 108 aa11.6□□□□□ -0.55
CMTM3-209ENST00000565003 CCDC69A6NI79 296 aa11.6□□□□□ -0.55
CMTM3-209ENST00000565003 SORBS3O60504 671 aa11.6□□□□□ -0.55
CMTM3-209ENST00000565003 ZNF286BP0CG31 522 aa11.6□□□□□ -0.55
CMTM3-209ENST00000565003 CCND2P30279 289 aa11.6□□□□□ -0.55
CMTM3-209ENST00000565003 KIF5BP33176 963 aa11.6□□□□□ -0.55
CMTM3-209ENST00000565003 PBX2P40425 430 aa11.6□□□□□ -0.55
CMTM3-209ENST00000565003 LIFRP42702 1097 aa11.6□□□□□ -0.55
CMTM3-209ENST00000565003 SP2Q02086 613 aa11.6□□□□□ -0.55
CMTM3-209ENST00000565003 PTPN11Q06124 597 aaPredicted RBP11.6□□□□□ -0.55
CMTM3-209ENST00000565003 OTOP2Q7RTS6 562 aa11.6□□□□□ -0.55
CMTM3-209ENST00000565003 TMTC2Q8N394 836 aa11.6□□□□□ -0.55
CMTM3-209ENST00000565003 SRBD1Q8N5C6 995 aaKnown RBP11.6□□□□□ -0.55
CMTM3-209ENST00000565003 SLC17A8Q8NDX2 589 aa11.6□□□□□ -0.55
CMTM3-209ENST00000565003 PPTC7Q8NI37 304 aa11.6□□□□□ -0.55
CMTM3-209ENST00000565003 RRP36Q96EU6 259 aaKnown RBP11.6□□□□□ -0.55
CMTM3-209ENST00000565003 PBX4Q9BYU1 374 aa11.6□□□□□ -0.55
CMTM3-209ENST00000565003 TANC1Q9C0D5 1861 aa11.59□□□□□ -0.55
CMTM3-209ENST00000565003 SCN5AQ14524 2016 aa11.59□□□□□ -0.55
CMTM3-209ENST00000565003 CDC45O75419 566 aa11.59□□□□□ -0.55
CMTM3-209ENST00000565003 GGPS1O95749 300 aa11.59□□□□□ -0.55
CMTM3-209ENST00000565003 FGBP02675 491 aa11.59□□□□□ -0.55
CMTM3-209ENST00000565003 CASTP20810 708 aaKnown RBP11.59□□□□□ -0.55
CMTM3-209ENST00000565003 UBA1P22314 1058 aaKnown RBP11.59□□□□□ -0.55
CMTM3-209ENST00000565003 SMARCA1P28370 1054 aa11.59□□□□□ -0.55
CMTM3-209ENST00000565003 MRPS9P82933 396 aaKnown RBP11.59□□□□□ -0.55
CMTM3-209ENST00000565003 LAMC2Q13753 1193 aa11.59□□□□□ -0.55
CMTM3-209ENST00000565003 DGKDQ16760 1214 aa11.59□□□□□ -0.55
CMTM3-209ENST00000565003 MYSM1Q5VVJ2 828 aa11.59□□□□□ -0.55
CMTM3-209ENST00000565003 GDF6Q6KF10 455 aaPredicted RBP11.59□□□□□ -0.55
CMTM3-209ENST00000565003 SESTD1Q86VW0 696 aa11.59□□□□□ -0.55
CMTM3-209ENST00000565003 RASEFQ8IZ41 740 aa11.59□□□□□ -0.55
CMTM3-209ENST00000565003 MYLIPQ8WY64 445 aa11.59□□□□□ -0.55
CMTM3-209ENST00000565003 TIFAQ96CG3 184 aa11.59□□□□□ -0.55
CMTM3-209ENST00000565003 LZTS2Q9BRK4 669 aa11.59□□□□□ -0.55
CMTM3-209ENST00000565003 SEC63Q9UGP8 760 aaKnown RBP11.59□□□□□ -0.55
CMTM3-209ENST00000565003 SLC12A7Q9Y666 1083 aa11.59□□□□□ -0.55
CMTM3-209ENST00000565003 hCG_1642624A0A1W2PR95 340 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 HAS3O00219 553 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 PITPNM1O00562 1244 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 MEIS2O14770 477 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 F2P00734 622 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 CALM1P0DP23 149 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 CALM2P0DP24 149 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 CALM3P0DP25 149 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 HOXD8P13378 290 aaPredicted RBP11.58□□□□□ -0.56
CMTM3-209ENST00000565003 GNAQP50148 359 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 SEMA3FQ13275 785 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 GRIN2CQ14957 1233 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 PTGISQ16647 500 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 ADCK5Q3MIX3 580 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 HSDL1Q3SXM5 330 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 CELF3Q5SZQ8 465 aaKnown RBP11.58□□□□□ -0.56
CMTM3-209ENST00000565003 RNF20Q5VTR2 975 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 USP17L6PQ6QN14 398 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 DEFB128Q7Z7B8 93 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 SGMS1Q86VZ5 419 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 MICU3Q86XE3 530 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 DHX37Q8IY37 1157 aaKnown RBP11.58□□□□□ -0.56
CMTM3-209ENST00000565003 TCEANC2Q96MN5 208 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 BCAS3Q9H6U6 928 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms