RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 CEP131Q9UPN4 1083 aa18■□□□□ 0.47
LINC00554-201ENST00000564841 BYSLQ13895 437 aaKnown RBP17.99■□□□□ 0.47
LINC00554-201ENST00000564841 IL17AQ16552 155 aa17.99■□□□□ 0.47
LINC00554-201ENST00000564841 MEA1Q16626 185 aa17.99■□□□□ 0.47
LINC00554-201ENST00000564841 FAM43BQ6ZT52 329 aaPredicted RBP17.99■□□□□ 0.47
LINC00554-201ENST00000564841 CNBD1Q8NA66 436 aa17.99■□□□□ 0.47
LINC00554-201ENST00000564841 RASSF8Q8NHQ8 419 aa17.99■□□□□ 0.47
LINC00554-201ENST00000564841 CASKIN2Q8WXE0 1202 aa17.99■□□□□ 0.47
LINC00554-201ENST00000564841 TMEM87BQ96K49 555 aa17.99■□□□□ 0.47
LINC00554-201ENST00000564841 IFIH1Q9BYX4 1025 aaKnown RBP17.99■□□□□ 0.47
LINC00554-201ENST00000564841 EPHB6O15197 1021 aa17.99■□□□□ 0.47
LINC00554-201ENST00000564841 GCKP35557 465 aa17.99■□□□□ 0.47
LINC00554-201ENST00000564841 MYO1EQ12965 1108 aa17.99■□□□□ 0.47
LINC00554-201ENST00000564841 PTPROQ16827 1216 aa17.99■□□□□ 0.47
LINC00554-201ENST00000564841 TBC1D22AQ8WUA7 517 aa17.99■□□□□ 0.47
LINC00554-201ENST00000564841 TRIM47Q96LD4 638 aa17.99■□□□□ 0.47
LINC00554-201ENST00000564841 ERICH2A1L162 156 aa17.98■□□□□ 0.47
LINC00554-201ENST00000564841 RPN1P04843 607 aaKnown RBP17.98■□□□□ 0.47
LINC00554-201ENST00000564841 ZNF512BQ96KM6 892 aaPredicted RBP17.98■□□□□ 0.47
LINC00554-201ENST00000564841 KRT12Q99456 494 aa17.98■□□□□ 0.47
LINC00554-201ENST00000564841 TACO1Q9BSH4 297 aaKnown RBP17.98■□□□□ 0.47
LINC00554-201ENST00000564841 PAGR1Q9BTK6 254 aa17.98■□□□□ 0.47
LINC00554-201ENST00000564841 ZNHIT6Q9NWK9 470 aaKnown RBP17.98■□□□□ 0.47
LINC00554-201ENST00000564841 CNOT8Q9UFF9 292 aaKnown RBP17.98■□□□□ 0.47
LINC00554-201ENST00000564841 WDR19Q8NEZ3 1342 aa17.98■□□□□ 0.47
LINC00554-201ENST00000564841 ENO4A6NNW6 628 aa17.98■□□□□ 0.47
LINC00554-201ENST00000564841 TACC1O75410 805 aa17.98■□□□□ 0.47
LINC00554-201ENST00000564841 PDXDC2PQ6P474 469 aa17.98■□□□□ 0.47
LINC00554-201ENST00000564841 C2CD5Q86YS7 1000 aa17.98■□□□□ 0.47
LINC00554-201ENST00000564841 ZNF654Q8IZM8 581 aa17.98■□□□□ 0.47
LINC00554-201ENST00000564841 SPDL1Q96EA4 605 aa17.98■□□□□ 0.47
LINC00554-201ENST00000564841 SEC16BQ96JE7 1060 aa17.98■□□□□ 0.47
LINC00554-201ENST00000564841 PCDHA13Q9Y5I0 950 aa17.98■□□□□ 0.47
LINC00554-201ENST00000564841 ECM29Q5VYK3 1845 aa17.98■□□□□ 0.47
LINC00554-201ENST00000564841 A0A1B0GUA9 196 aa17.98■□□□□ 0.47
LINC00554-201ENST00000564841 PRDX5P30044 214 aa17.98■□□□□ 0.47
LINC00554-201ENST00000564841 SPA17Q15506 151 aa17.98■□□□□ 0.47
LINC00554-201ENST00000564841 HIBCHQ6NVY1 386 aaPredicted RBP17.98■□□□□ 0.47
LINC00554-201ENST00000564841 DDX42Q86XP3 938 aaKnown RBP eCLIP17.98■□□□□ 0.47
LINC00554-201ENST00000564841 TLR10Q9BXR5 811 aa17.98■□□□□ 0.47
LINC00554-201ENST00000564841 STK36Q9NRP7 1315 aa17.98■□□□□ 0.47
LINC00554-201ENST00000564841 ZNF658Q5TYW1 1059 aaPredicted RBP17.97■□□□□ 0.47
LINC00554-201ENST00000564841 FANCBQ8NB91 859 aa17.97■□□□□ 0.47
LINC00554-201ENST00000564841 TRIM58Q8NG06 486 aa17.97■□□□□ 0.47
LINC00554-201ENST00000564841 NSMCE1Q8WV22 266 aa17.97■□□□□ 0.47
LINC00554-201ENST00000564841 WASF1Q92558 559 aa17.97■□□□□ 0.47
LINC00554-201ENST00000564841 MTMR8Q96EF0 704 aa17.97■□□□□ 0.47
LINC00554-201ENST00000564841 TTYH3Q9C0H2 523 aa17.97■□□□□ 0.47
LINC00554-201ENST00000564841 SH2D4AQ9H788 454 aa17.97■□□□□ 0.47
LINC00554-201ENST00000564841 ARHGAP20Q9P2F6 1191 aa17.97■□□□□ 0.47
LINC00554-201ENST00000564841 MAGEB6P1A0A0J9YX57 407 aa17.97■□□□□ 0.47
LINC00554-201ENST00000564841 GMNCA6NCL1 334 aa17.97■□□□□ 0.47
LINC00554-201ENST00000564841 PP2D1A8MPX8 630 aa17.97■□□□□ 0.47
LINC00554-201ENST00000564841 IRF6O14896 467 aa17.97■□□□□ 0.47
LINC00554-201ENST00000564841 DEXIO95424 95 aa17.97■□□□□ 0.47
LINC00554-201ENST00000564841 MCM7P33993 719 aa17.97■□□□□ 0.47
LINC00554-201ENST00000564841 FAM47AQ5JRC9 791 aa17.97■□□□□ 0.47
LINC00554-201ENST00000564841 TUBGCP2Q9BSJ2 902 aa17.97■□□□□ 0.47
LINC00554-201ENST00000564841 HIBADHP31937 336 aaKnown RBP17.96■□□□□ 0.47
LINC00554-201ENST00000564841 PAFAH1B1P43034 410 aa17.96■□□□□ 0.47
LINC00554-201ENST00000564841 RC3H1Q5TC82 1133 aaKnown RBP17.96■□□□□ 0.47
LINC00554-201ENST00000564841 FMNL3Q8IVF7 1028 aa17.96■□□□□ 0.47
LINC00554-201ENST00000564841 KLHL7Q8IXQ5 586 aa17.96■□□□□ 0.47
LINC00554-201ENST00000564841 ZNF483Q8TF39 744 aaPredicted RBP17.96■□□□□ 0.47
LINC00554-201ENST00000564841 TCP11Q8WWU5 503 aa17.96■□□□□ 0.47
LINC00554-201ENST00000564841 NACAP1Q9BZK3 213 aa17.96■□□□□ 0.47
LINC00554-201ENST00000564841 FAM207AQ9NSI2 230 aaPredicted RBP17.96■□□□□ 0.47
LINC00554-201ENST00000564841 HYOU1Q9Y4L1 999 aa17.96■□□□□ 0.47
LINC00554-201ENST00000564841 EIF4A3P38919 411 aaKnown RBP17.96■□□□□ 0.47
LINC00554-201ENST00000564841 SARNPP82979 210 aaKnown RBP17.96■□□□□ 0.47
LINC00554-201ENST00000564841 PPP1R7Q15435 360 aa17.96■□□□□ 0.47
LINC00554-201ENST00000564841 MDM1Q8TC05 714 aa17.96■□□□□ 0.47
LINC00554-201ENST00000564841 TNKSO95271 1327 aa17.96■□□□□ 0.47
LINC00554-201ENST00000564841 MYBL1P10243 752 aa17.96■□□□□ 0.46
LINC00554-201ENST00000564841 RASSF7Q02833 373 aa17.96■□□□□ 0.46
LINC00554-201ENST00000564841 UBE4AQ14139 1066 aa17.96■□□□□ 0.46
LINC00554-201ENST00000564841 PLCB4Q15147 1175 aa17.96■□□□□ 0.46
LINC00554-201ENST00000564841 ODF2Q5BJF6 829 aa17.96■□□□□ 0.46
LINC00554-201ENST00000564841 IFT20Q8IY31 132 aa17.96■□□□□ 0.46
LINC00554-201ENST00000564841 NOD2Q9HC29 1040 aa17.96■□□□□ 0.46
LINC00554-201ENST00000564841 FTCDO95954 541 aa17.95■□□□□ 0.46
LINC00554-201ENST00000564841 HLTFQ14527 1009 aaKnown RBP eCLIP17.95■□□□□ 0.46
LINC00554-201ENST00000564841 KCNB1Q14721 858 aa17.95■□□□□ 0.46
LINC00554-201ENST00000564841 KRT27Q7Z3Y8 459 aa17.95■□□□□ 0.46
LINC00554-201ENST00000564841 PNMA8AQ86V59 439 aaPredicted RBP17.95■□□□□ 0.46
LINC00554-201ENST00000564841 PARD3BQ8TEW8 1205 aa17.95■□□□□ 0.46
LINC00554-201ENST00000564841 HVCN1Q96D96 273 aa17.95■□□□□ 0.46
LINC00554-201ENST00000564841 BTAF1O14981 1849 aa17.95■□□□□ 0.46
LINC00554-201ENST00000564841 H7C1D1 291 aa17.95■□□□□ 0.46
LINC00554-201ENST00000564841 CLTAP09496 248 aa17.95■□□□□ 0.46
LINC00554-201ENST00000564841 GDF3Q9NR23 364 aa17.95■□□□□ 0.46
LINC00554-201ENST00000564841 ZNF804BA4D1E1 1349 aa17.94■□□□□ 0.46
LINC00554-201ENST00000564841 PDS5AQ29RF7 1337 aaKnown RBP17.94■□□□□ 0.46
LINC00554-201ENST00000564841 SRGNP10124 158 aa17.94■□□□□ 0.46
LINC00554-201ENST00000564841 LIFRP42702 1097 aa17.94■□□□□ 0.46
LINC00554-201ENST00000564841 ELF3P78545 371 aaPredicted RBP17.94■□□□□ 0.46
LINC00554-201ENST00000564841 ADSSL1Q8N142 457 aa17.94■□□□□ 0.46
LINC00554-201ENST00000564841 NOC3LQ8WTT2 800 aaKnown RBP17.94■□□□□ 0.46
LINC00554-201ENST00000564841 RAPGEF5Q92565 580 aa17.94■□□□□ 0.46
LINC00554-201ENST00000564841 RPGRQ92834 1020 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms