RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 MMS19Q96T76 1030 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 PLAGL2Q9UPG8 496 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 SAR1BQ9Y6B6 198 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 C6orf229H3BNL8 230 aa16.97■□□□□ 0.31
HERC2-207ENST00000564734 EPHB6O15197 1021 aa16.97■□□□□ 0.31
HERC2-207ENST00000564734 TTLL1O95922 423 aa16.97■□□□□ 0.31
HERC2-207ENST00000564734 LRRC55Q6ZSA7 311 aa16.97■□□□□ 0.31
HERC2-207ENST00000564734 COL23A1Q86Y22 540 aaPredicted RBP16.97■□□□□ 0.31
HERC2-207ENST00000564734 SP8Q8IXZ3 490 aa16.97■□□□□ 0.31
HERC2-207ENST00000564734 HAS1Q92839 578 aa16.97■□□□□ 0.31
HERC2-207ENST00000564734 UPF1Q92900 1129 aaKnown RBP eCLIP16.97■□□□□ 0.31
HERC2-207ENST00000564734 NDST4Q9H3R1 872 aa16.97■□□□□ 0.31
HERC2-207ENST00000564734 POLRMTO00411 1230 aaKnown RBP16.97■□□□□ 0.31
HERC2-207ENST00000564734 SHMT1P34896 483 aa16.97■□□□□ 0.31
HERC2-207ENST00000564734 USP14P54578 494 aa16.97■□□□□ 0.31
HERC2-207ENST00000564734 DYMQ7RTS9 669 aa16.97■□□□□ 0.31
HERC2-207ENST00000564734 COA1Q9GZY4 146 aa16.97■□□□□ 0.31
HERC2-207ENST00000564734 SUGCTQ9HAC7 445 aa16.97■□□□□ 0.31
HERC2-207ENST00000564734 DUSP10Q9Y6W6 482 aa16.97■□□□□ 0.31
HERC2-207ENST00000564734 VAV2P52735 878 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 EIF6P56537 245 aaKnown RBP16.96■□□□□ 0.31
HERC2-207ENST00000564734 LRRC63Q05C16 580 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 PSMD2Q13200 908 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 SNX29Q8TEQ0 813 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 RAB34Q9BZG1 259 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 SWAP70Q9UH65 585 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 ANO9A1A5B4 782 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 SRGAP2O75044 1071 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 LCA5LO95447 670 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 MAN2A1Q16706 1144 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 UBE2SQ16763 222 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 TTBK2Q6IQ55 1244 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 DDX12PQ92771 950 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 PCMTD1Q96MG8 357 aaPredicted RBP16.96■□□□□ 0.31
HERC2-207ENST00000564734 PLEKP08567 350 aaPredicted RBP16.96■□□□□ 0.31
HERC2-207ENST00000564734 CYP27A1Q02318 531 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 KRT79Q5XKE5 535 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 TMC4Q7Z404 712 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 DNAJC19Q96DA6 116 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 CDK5RAP3Q96JB5 506 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 GBP3Q9H0R5 595 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 ARHGAP20Q9P2F6 1191 aa16.96■□□□□ 0.31
HERC2-207ENST00000564734 R3HDM1Q15032 1099 aaKnown RBP16.95■□□□□ 0.3
HERC2-207ENST00000564734 SLC15A2Q16348 729 aa16.95■□□□□ 0.3
HERC2-207ENST00000564734 HYIQ5T013 277 aa16.95■□□□□ 0.3
HERC2-207ENST00000564734 LRRC27Q9C0I9 530 aa16.95■□□□□ 0.3
HERC2-207ENST00000564734 PDE11AQ9HCR9 933 aa16.95■□□□□ 0.3
HERC2-207ENST00000564734 SERPINB13Q9UIV8 391 aa16.95■□□□□ 0.3
HERC2-207ENST00000564734 ATF5Q9Y2D1 282 aaPredicted RBP16.95■□□□□ 0.3
HERC2-207ENST00000564734 GREB1LQ9C091 1923 aaPredicted RBP16.95■□□□□ 0.3
HERC2-207ENST00000564734 PPEF1O14829 653 aaPredicted RBP16.95■□□□□ 0.3
HERC2-207ENST00000564734 TAF3Q5VWG9 929 aa16.95■□□□□ 0.3
HERC2-207ENST00000564734 GLIS3Q8NEA6 775 aa16.95■□□□□ 0.3
HERC2-207ENST00000564734 FGFR1OPO95684 399 aaKnown RBP16.94■□□□□ 0.3
HERC2-207ENST00000564734 TNNI2P48788 182 aa16.94■□□□□ 0.3
HERC2-207ENST00000564734 DDX25Q9UHL0 483 aaKnown RBP16.94■□□□□ 0.3
HERC2-207ENST00000564734 CCDC66A2RUB6 948 aa16.94■□□□□ 0.3
HERC2-207ENST00000564734 ERICH4A6NGS2 130 aa16.94■□□□□ 0.3
HERC2-207ENST00000564734 RIMBP2O15034 1052 aa16.94■□□□□ 0.3
HERC2-207ENST00000564734 CASP8Q14790 479 aa16.94■□□□□ 0.3
HERC2-207ENST00000564734 ZCWPW2Q504Y3 356 aa16.94■□□□□ 0.3
HERC2-207ENST00000564734 BAP1Q92560 729 aa16.94■□□□□ 0.3
HERC2-207ENST00000564734 TSGA10Q9BZW7 698 aa16.94■□□□□ 0.3
HERC2-207ENST00000564734 PPP1R1BQ9UD71 204 aaPredicted RBP16.94■□□□□ 0.3
HERC2-207ENST00000564734 ATP6V0A2Q9Y487 856 aa16.94■□□□□ 0.3
HERC2-207ENST00000564734 ZBTB5O15062 677 aa16.94■□□□□ 0.3
HERC2-207ENST00000564734 CUL5Q93034 780 aa16.94■□□□□ 0.3
HERC2-207ENST00000564734 RPGRIP1Q96KN7 1286 aa16.94■□□□□ 0.3
HERC2-207ENST00000564734 CCDC42Q96M95 316 aa16.94■□□□□ 0.3
HERC2-207ENST00000564734 USP40Q9NVE5 1235 aa16.94■□□□□ 0.3
HERC2-207ENST00000564734 SEPT2Q15019 361 aa16.93■□□□□ 0.3
HERC2-207ENST00000564734 GPATCH4Q5T3I0 446 aaKnown RBP16.93■□□□□ 0.3
HERC2-207ENST00000564734 KRT26Q7Z3Y9 468 aa16.93■□□□□ 0.3
HERC2-207ENST00000564734 PSD3Q9NYI0 1048 aa16.93■□□□□ 0.3
HERC2-207ENST00000564734 USP17L10C9JJH3 530 aa16.93■□□□□ 0.3
HERC2-207ENST00000564734 F8W031 263 aaPredicted RBP16.93■□□□□ 0.3
HERC2-207ENST00000564734 PDE2AO00408 941 aaPredicted RBP16.93■□□□□ 0.3
HERC2-207ENST00000564734 ZBTB7AO95365 584 aa16.93■□□□□ 0.3
HERC2-207ENST00000564734 IPO7O95373 1038 aaKnown RBP16.93■□□□□ 0.3
HERC2-207ENST00000564734 KIF5AQ12840 1032 aa16.93■□□□□ 0.3
HERC2-207ENST00000564734 CDC42EP5Q6NZY7 148 aa16.93■□□□□ 0.3
HERC2-207ENST00000564734 CCDC84Q86UT8 332 aaPredicted RBP16.93■□□□□ 0.3
HERC2-207ENST00000564734 PCDHA13Q9Y5I0 950 aa16.93■□□□□ 0.3
HERC2-207ENST00000564734 TARSL2A2RTX5 802 aaKnown RBP16.92■□□□□ 0.3
HERC2-207ENST00000564734 GCFC2P16383 781 aaKnown RBP16.92■□□□□ 0.3
HERC2-207ENST00000564734 SLC16A2P36021 539 aa16.92■□□□□ 0.3
HERC2-207ENST00000564734 CKAP4Q07065 602 aaKnown RBP16.92■□□□□ 0.3
HERC2-207ENST00000564734 COASYQ13057 564 aa16.92■□□□□ 0.3
HERC2-207ENST00000564734 LRRC41Q15345 812 aa16.92■□□□□ 0.3
HERC2-207ENST00000564734 SECISBP2LQ93073 1101 aaKnown RBP16.92■□□□□ 0.3
HERC2-207ENST00000564734 GJA10Q969M2 543 aa16.92■□□□□ 0.3
HERC2-207ENST00000564734 AKT1S1Q96B36 256 aa16.92■□□□□ 0.3
HERC2-207ENST00000564734 MXD3Q9BW11 206 aa16.92■□□□□ 0.3
HERC2-207ENST00000564734 SH2D4AQ9H788 454 aa16.92■□□□□ 0.3
HERC2-207ENST00000564734 FAM207AQ9NSI2 230 aaPredicted RBP16.92■□□□□ 0.3
HERC2-207ENST00000564734 ADAM21Q9UKJ8 722 aa16.92■□□□□ 0.3
HERC2-207ENST00000564734 LRRIQ3A6PVS8 624 aaPredicted RBP16.92■□□□□ 0.3
HERC2-207ENST00000564734 IDEP14735 1019 aa16.92■□□□□ 0.3
HERC2-207ENST00000564734 MRPL12P52815 198 aaKnown RBP16.92■□□□□ 0.3
HERC2-207ENST00000564734 GYS2P54840 703 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms