RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 OSBP2Q969R2 916 aa7.56□□□□□ -1.2
UBR1-205ENST00000564540 TRMT2BQ96GJ1 504 aaKnown RBP7.56□□□□□ -1.2
UBR1-205ENST00000564540 TMEM169Q96HH4 297 aa7.56□□□□□ -1.2
UBR1-205ENST00000564540 CHAMP1Q96JM3 812 aa7.56□□□□□ -1.2
UBR1-205ENST00000564540 PWWP2AQ96N64 755 aa7.56□□□□□ -1.2
UBR1-205ENST00000564540 PFDN2Q9UHV9 154 aa7.56□□□□□ -1.2
UBR1-205ENST00000564540 NPFFR2Q9Y5X5 522 aa7.56□□□□□ -1.2
UBR1-205ENST00000564540 BLACEA4D250 179 aa7.55□□□□□ -1.2
UBR1-205ENST00000564540 AFF3P51826 1226 aaKnown RBP7.55□□□□□ -1.2
UBR1-205ENST00000564540 SLC9A5Q14940 896 aa7.55□□□□□ -1.2
UBR1-205ENST00000564540 VMACQ2NL98 169 aa7.55□□□□□ -1.2
UBR1-205ENST00000564540 TCERG1LQ5VWI1 586 aa7.55□□□□□ -1.2
UBR1-205ENST00000564540 NBPF6Q5VWK0 638 aa7.55□□□□□ -1.2
UBR1-205ENST00000564540 USP53Q70EK8 1073 aa7.55□□□□□ -1.2
UBR1-205ENST00000564540 DCP2Q8IU60 420 aaKnown RBP7.55□□□□□ -1.2
UBR1-205ENST00000564540 LRRC47Q8N1G4 583 aaKnown RBP7.55□□□□□ -1.2
UBR1-205ENST00000564540 Q8N1Y9 231 aa7.55□□□□□ -1.2
UBR1-205ENST00000564540 NBPF4Q96M43 638 aa7.55□□□□□ -1.2
UBR1-205ENST00000564540 HIRIP3Q9BW71 556 aaPredicted RBP7.55□□□□□ -1.2
UBR1-205ENST00000564540 SGSM2O43147 1006 aa7.54□□□□□ -1.2
UBR1-205ENST00000564540 MSCO60682 206 aa7.54□□□□□ -1.2
UBR1-205ENST00000564540 FGFR1P11362 822 aa7.54□□□□□ -1.2
UBR1-205ENST00000564540 PABPC1P11940 636 aaKnown RBP7.54□□□□□ -1.2
UBR1-205ENST00000564540 NCAM1P13591 858 aa7.54□□□□□ -1.2
UBR1-205ENST00000564540 GTF2A2P52657 109 aa7.54□□□□□ -1.2
UBR1-205ENST00000564540 RBL2Q08999 1139 aa7.54□□□□□ -1.2
UBR1-205ENST00000564540 SERINC3Q13530 473 aa7.54□□□□□ -1.2
UBR1-205ENST00000564540 RASGRF1Q13972 1273 aa7.54□□□□□ -1.2
UBR1-205ENST00000564540 MTERF2Q49AM1 385 aa7.54□□□□□ -1.2
UBR1-205ENST00000564540 SPATA9Q9BWV2 254 aa7.54□□□□□ -1.2
UBR1-205ENST00000564540 RNF38Q9H0F5 515 aa7.54□□□□□ -1.2
UBR1-205ENST00000564540 SIRPGQ9P1W8 387 aa7.54□□□□□ -1.2
UBR1-205ENST00000564540 X6R8D5 127 aa7.54□□□□□ -1.2
UBR1-205ENST00000564540 TRAV20A0A0B4J274 112 aa7.53□□□□□ -1.2
UBR1-205ENST00000564540 DIAPH1O60610 1272 aaKnown RBP7.53□□□□□ -1.2
UBR1-205ENST00000564540 ZBTB7AO95365 584 aa7.53□□□□□ -1.2
UBR1-205ENST00000564540 FOXO4P98177 505 aa7.53□□□□□ -1.2
UBR1-205ENST00000564540 LSAMPQ13449 338 aa7.53□□□□□ -1.2
UBR1-205ENST00000564540 NTRK3Q16288 839 aa7.53□□□□□ -1.2
UBR1-205ENST00000564540 MROH9Q5TGP6 573 aa7.53□□□□□ -1.2
UBR1-205ENST00000564540 NSMFQ6X4W1 530 aa7.53□□□□□ -1.2
UBR1-205ENST00000564540 RIOX2Q8IUF8 465 aa7.53□□□□□ -1.2
UBR1-205ENST00000564540 ARMC5Q96C12 935 aa7.53□□□□□ -1.2
UBR1-205ENST00000564540 PHF20Q9BVI0 1012 aa7.53□□□□□ -1.2
UBR1-205ENST00000564540 CCDC113Q9H0I3 377 aa7.53□□□□□ -1.2
UBR1-205ENST00000564540 AP5M1Q9H0R1 490 aa7.53□□□□□ -1.2
UBR1-205ENST00000564540 CLDND1Q9NY35 253 aa7.53□□□□□ -1.2
UBR1-205ENST00000564540 PALD1Q9ULE6 856 aa7.53□□□□□ -1.2
UBR1-205ENST00000564540 FAN1Q9Y2M0 1017 aa7.53□□□□□ -1.2
UBR1-205ENST00000564540 ADAMTS20P59510 1910 aa7.52□□□□□ -1.2
UBR1-205ENST00000564540 FAM221BA6H8Z2 402 aa7.52□□□□□ -1.21
UBR1-205ENST00000564540 ADCY3O60266 1144 aa7.52□□□□□ -1.21
UBR1-205ENST00000564540 PLA2G1BP04054 148 aaKnown RBP7.52□□□□□ -1.21
UBR1-205ENST00000564540 RBM10P98175 930 aaKnown RBP7.52□□□□□ -1.21
UBR1-205ENST00000564540 SSRP1Q08945 709 aaKnown RBP7.52□□□□□ -1.21
UBR1-205ENST00000564540 KCNT2Q6UVM3 1135 aa7.52□□□□□ -1.21
UBR1-205ENST00000564540 TMEM151BQ8IW70 566 aa7.52□□□□□ -1.21
UBR1-205ENST00000564540 ZNF669Q96BR6 464 aaPredicted RBP7.52□□□□□ -1.21
UBR1-205ENST00000564540 CDIP1Q9H305 208 aa7.52□□□□□ -1.21
UBR1-205ENST00000564540 GPR27Q9NS67 375 aa7.52□□□□□ -1.21
UBR1-205ENST00000564540 PPARGC1AQ9UBK2 798 aaKnown RBP7.52□□□□□ -1.21
UBR1-205ENST00000564540 JAG2Q9Y219 1238 aa7.52□□□□□ -1.21
UBR1-205ENST00000564540 SLC6A11P48066 632 aa7.51□□□□□ -1.21
UBR1-205ENST00000564540 RASA3Q14644 834 aa7.51□□□□□ -1.21
UBR1-205ENST00000564540 MILR1Q7Z6M3 343 aa7.51□□□□□ -1.21
UBR1-205ENST00000564540 B3GNT8Q7Z7M8 397 aa7.51□□□□□ -1.21
UBR1-205ENST00000564540 SMARCC2Q8TAQ2 1214 aa7.51□□□□□ -1.21
UBR1-205ENST00000564540 PMFBP1Q8TBY8 1022 aa7.51□□□□□ -1.21
UBR1-205ENST00000564540 SEC14L1Q92503 715 aa7.51□□□□□ -1.21
UBR1-205ENST00000564540 SYT3Q9BQG1 590 aa7.51□□□□□ -1.21
UBR1-205ENST00000564540 COA3Q9Y2R0 106 aaPredicted RBP7.51□□□□□ -1.21
UBR1-205ENST00000564540 H7BY64 318 aa7.5□□□□□ -1.21
UBR1-205ENST00000564540 TRIM13O60858 407 aa7.5□□□□□ -1.21
UBR1-205ENST00000564540 BMP7P18075 431 aa7.5□□□□□ -1.21
UBR1-205ENST00000564540 CACNB2Q08289 660 aaPredicted RBP7.5□□□□□ -1.21
UBR1-205ENST00000564540 IFRD2Q12894 506 aaPredicted RBP7.5□□□□□ -1.21
UBR1-205ENST00000564540 SF3A1Q15459 793 aaKnown RBP7.5□□□□□ -1.21
UBR1-205ENST00000564540 FOXB2Q5VYV0 432 aa7.5□□□□□ -1.21
UBR1-205ENST00000564540 FNIP1Q8TF40 1166 aa7.5□□□□□ -1.21
UBR1-205ENST00000564540 DCAF4Q8WV16 495 aa7.5□□□□□ -1.21
UBR1-205ENST00000564540 CPA5Q8WXQ8 436 aa7.5□□□□□ -1.21
UBR1-205ENST00000564540 NOX5Q96PH1 765 aa7.5□□□□□ -1.21
UBR1-205ENST00000564540 DEPDC7Q96QD5 511 aa7.5□□□□□ -1.21
UBR1-205ENST00000564540 JAM3Q9BX67 310 aa7.5□□□□□ -1.21
UBR1-205ENST00000564540 SNTG2Q9NY99 539 aa7.5□□□□□ -1.21
UBR1-205ENST00000564540 FFAR3O14843 346 aa7.49□□□□□ -1.21
UBR1-205ENST00000564540 C8BP07358 591 aa7.49□□□□□ -1.21
UBR1-205ENST00000564540 ADGRG2Q8IZP9 1017 aa7.49□□□□□ -1.21
UBR1-205ENST00000564540 FAM26EQ8N5C1 309 aa7.49□□□□□ -1.21
UBR1-205ENST00000564540 DDX11Q96FC9 970 aa7.49□□□□□ -1.21
UBR1-205ENST00000564540 DNAJC2Q99543 621 aaKnown RBP7.49□□□□□ -1.21
UBR1-205ENST00000564540 PMF1-BGLAPU3KQ54 211 aa7.49□□□□□ -1.21
UBR1-205ENST00000564540 ASXL2Q76L83 1435 aa7.49□□□□□ -1.21
UBR1-205ENST00000564540 DGKIO75912 1065 aa7.48□□□□□ -1.21
UBR1-205ENST00000564540 FAM153BP0C7A2 387 aa7.48□□□□□ -1.21
UBR1-205ENST00000564540 HTRA3P83110 453 aa7.48□□□□□ -1.21
UBR1-205ENST00000564540 FAM209AQ5JX71 171 aa7.48□□□□□ -1.21
UBR1-205ENST00000564540 STEAP3Q658P3 488 aa7.48□□□□□ -1.21
UBR1-205ENST00000564540 RSPO2Q6UXX9 243 aaPredicted RBP7.48□□□□□ -1.21
UBR1-205ENST00000564540 ETV3LQ6ZN32 361 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms