RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 A0A0U1RQG5 324 aaPredicted RBP5.51□□□□□ -1.53
CAPN3-212ENST00000564503 PRAMEF27A3QJZ7 478 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 ANKRD33BA6NCL7 494 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 GOLGA6L4A6NEF3 574 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 KIF2AO00139 706 aaPredicted RBP5.51□□□□□ -1.53
CAPN3-212ENST00000564503 BIN1O00499 593 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 LRIG2O94898 1065 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 LARGE1O95461 756 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 PSMA5P28066 241 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 CDK8P49336 464 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 LARP1BQ659C4 914 aaKnown RBP5.51□□□□□ -1.53
CAPN3-212ENST00000564503 OGFOD2Q6N063 350 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 ZSCAN25Q6NSZ9 544 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 SPACA3Q8IXA5 215 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 KRT222Q8N1A0 295 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 KIF18AQ8NI77 898 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 GAL3ST3Q96A11 431 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 C16orf45Q96MC5 204 aaPredicted RBP5.51□□□□□ -1.53
CAPN3-212ENST00000564503 JAKMIP1Q96N16 626 aaKnown RBP5.51□□□□□ -1.53
CAPN3-212ENST00000564503 PSMD1Q99460 953 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 DUSP9Q99956 384 aaKnown RBP5.51□□□□□ -1.53
CAPN3-212ENST00000564503 TRIM5Q9C035 493 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 WNT10AQ9GZT5 417 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 IL25Q9H293 177 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 ALDH8A1Q9H2A2 487 aaPredicted RBP5.51□□□□□ -1.53
CAPN3-212ENST00000564503 CLSTN2Q9H4D0 955 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 FBRSQ9HAH7 460 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 RC3H2Q9HBD1 1191 aaKnown RBP5.51□□□□□ -1.53
CAPN3-212ENST00000564503 SNCAIPQ9Y6H5 919 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 SBNO1A3KN83 1393 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 FLT4P35916 1363 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 ADAMTS7Q9UKP4 1686 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 PTPRUQ92729 1446 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 ABCC6O95255 1503 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 HIP1O00291 1037 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 CTAGE5O15320 804 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 SURF6O75683 361 aaKnown RBP5.5□□□□□ -1.53
CAPN3-212ENST00000564503 GLRX3O76003 335 aaKnown RBP5.5□□□□□ -1.53
CAPN3-212ENST00000564503 CLSTN1O94985 981 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 SLITRK5O94991 958 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 MAP4K4O95819 1239 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-212ENST00000564503 FGD1P98174 961 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 SLBPQ14493 270 aaKnown RBP eCLIP5.5□□□□□ -1.53
CAPN3-212ENST00000564503 ANKRD1Q15327 319 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 CCDC85BQ15834 202 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-212ENST00000564503 ME3Q16798 604 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 NKPD1Q17RQ9 610 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 MTHFSDQ2M296 383 aaKnown RBP5.5□□□□□ -1.53
CAPN3-212ENST00000564503 EAPPQ56P03 285 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-212ENST00000564503 ANGEL2Q5VTE6 544 aaKnown RBP5.5□□□□□ -1.53
CAPN3-212ENST00000564503 SARM1Q6SZW1 724 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 CWC27Q6UX04 472 aaKnown RBP5.5□□□□□ -1.53
CAPN3-212ENST00000564503 ATG4DQ86TL0 474 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-212ENST00000564503 LUZP1Q86V48 1076 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 ERO1AQ96HE7 468 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 GPATCH3Q96I76 525 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 FOXQ1Q9C009 403 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 IL1RAPL2Q9NP60 686 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 KCND1Q9NSA2 647 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 FAM53CQ9NYF3 392 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 PCDHB5Q9Y5E4 795 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 NWD2Q9ULI1 1742 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 CAMTA1Q9Y6Y1 1673 aa5.5□□□□□ -1.53
CAPN3-212ENST00000564503 MAP3K19Q56UN5 1328 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 CNTNAP4Q9C0A0 1308 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 MYO5AQ9Y4I1 1855 aaKnown RBP5.49□□□□□ -1.53
CAPN3-212ENST00000564503 MYH1P12882 1939 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 GNAT3A8MTJ3 354 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 GOLGA6L19H0YKK7 550 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 SLU7O95391 586 aaKnown RBP5.49□□□□□ -1.53
CAPN3-212ENST00000564503 RAPGEF3O95398 923 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 TUBB4AP04350 444 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 ZKSCAN1P17029 563 aaPredicted RBP5.49□□□□□ -1.53
CAPN3-212ENST00000564503 ZNF165P49910 485 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 ETF1P62495 437 aaKnown RBP5.49□□□□□ -1.53
CAPN3-212ENST00000564503 RPS26P62854 115 aaKnown RBP5.49□□□□□ -1.53
CAPN3-212ENST00000564503 RBM6P78332 1123 aaKnown RBP5.49□□□□□ -1.53
CAPN3-212ENST00000564503 ST3GAL1Q11201 340 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 LRMPQ12912 555 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 DHX8Q14562 1220 aaKnown RBP5.49□□□□□ -1.53
CAPN3-212ENST00000564503 NECTIN1Q15223 517 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 TERF2Q15554 542 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 PTPN14Q15678 1187 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 NKG7Q16617 165 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 WIPI1Q5MNZ9 446 aaPredicted RBP5.49□□□□□ -1.53
CAPN3-212ENST00000564503 SND1Q7KZF4 910 aaKnown RBP eCLIP5.49□□□□□ -1.53
CAPN3-212ENST00000564503 PPP1R42Q7Z4L9 355 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 ERC1Q8IUD2 1116 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 LRRC8AQ8IWT6 810 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 LRRN4CLQ8ND94 238 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 CACTINQ8WUQ7 758 aaKnown RBP5.49□□□□□ -1.53
CAPN3-212ENST00000564503 ASB11Q8WXH4 323 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 MRFAP1L1Q96HT8 127 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 SPATA32Q96LK8 384 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 KRTAP9-9Q9BYP9 154 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 KRTAP9-4Q9BYQ2 154 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 USP44Q9H0E7 712 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 PRDM5Q9NQX1 630 aaPredicted RBP5.49□□□□□ -1.53
CAPN3-212ENST00000564503 DACT1Q9NYF0 836 aa5.49□□□□□ -1.53
CAPN3-212ENST00000564503 MIS18AQ9NYP9 233 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms