RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 SAMD3Q8N6K7 520 aa29.22■■■□□ 2.27
AC009041.3-201ENST00000564390 ALDH8A1Q9H2A2 487 aaPredicted RBP29.22■■■□□ 2.27
AC009041.3-201ENST00000564390 UMODL1Q5DID0 1318 aa29.21■■■□□ 2.27
AC009041.3-201ENST00000564390 SCN10AQ9Y5Y9 1956 aa29.21■■■□□ 2.27
AC009041.3-201ENST00000564390 RGS20O76081 388 aa29.21■■■□□ 2.27
AC009041.3-201ENST00000564390 CHMP4BP1P59074 171 aa29.21■■■□□ 2.27
AC009041.3-201ENST00000564390 EXOSC10Q01780 885 aaKnown RBP29.21■■■□□ 2.27
AC009041.3-201ENST00000564390 FAM47CQ5HY64 1035 aa29.21■■■□□ 2.27
AC009041.3-201ENST00000564390 APOA5Q6Q788 366 aa29.21■■■□□ 2.27
AC009041.3-201ENST00000564390 TMTC3Q6ZXV5 915 aa29.21■■■□□ 2.27
AC009041.3-201ENST00000564390 DEFB123Q8N688 67 aa29.21■■■□□ 2.27
AC009041.3-201ENST00000564390 RNPC3Q96LT9 517 aaKnown RBP29.21■■■□□ 2.27
AC009041.3-201ENST00000564390 HIPK3Q9H422 1215 aa29.21■■■□□ 2.27
AC009041.3-201ENST00000564390 DDX41Q9UJV9 622 aaKnown RBP29.21■■■□□ 2.27
AC009041.3-201ENST00000564390 SORBS3O60504 671 aa29.2■■■□□ 2.26
AC009041.3-201ENST00000564390 MMP3P08254 477 aa29.2■■■□□ 2.26
AC009041.3-201ENST00000564390 CSF2RAP15509 400 aa29.2■■■□□ 2.26
AC009041.3-201ENST00000564390 SMARCA1P28370 1054 aa29.2■■■□□ 2.26
AC009041.3-201ENST00000564390 NBPF20Q3BBV1 942 aa29.2■■■□□ 2.26
AC009041.3-201ENST00000564390 TSGA10IPQ3SY00 556 aa29.2■■■□□ 2.26
AC009041.3-201ENST00000564390 GPR153Q6NV75 609 aa29.2■■■□□ 2.26
AC009041.3-201ENST00000564390 DHX32Q7L7V1 743 aaKnown RBP29.2■■■□□ 2.26
AC009041.3-201ENST00000564390 FANCBQ8NB91 859 aa29.2■■■□□ 2.26
AC009041.3-201ENST00000564390 TRMT13Q9NUP7 481 aaKnown RBP29.2■■■□□ 2.26
AC009041.3-201ENST00000564390 LAMA2P24043 3122 aaKnown RBP29.2■■■□□ 2.26
AC009041.3-201ENST00000564390 CPA1P15085 419 aa29.19■■■□□ 2.26
AC009041.3-201ENST00000564390 CCND2P30279 289 aa29.19■■■□□ 2.26
AC009041.3-201ENST00000564390 KRT32Q14532 448 aa29.19■■■□□ 2.26
AC009041.3-201ENST00000564390 VSIG10LQ86VR7 867 aa29.19■■■□□ 2.26
AC009041.3-201ENST00000564390 SEZ6LQ9BYH1 1024 aa29.19■■■□□ 2.26
AC009041.3-201ENST00000564390 BRPF3Q9ULD4 1205 aa29.19■■■□□ 2.26
AC009041.3-201ENST00000564390 KPNA6O60684 536 aa29.18■■■□□ 2.26
AC009041.3-201ENST00000564390 PPIGQ13427 754 aaKnown RBP eCLIP29.18■■■□□ 2.26
AC009041.3-201ENST00000564390 USP17L6PQ6QN14 398 aa29.18■■■□□ 2.26
AC009041.3-201ENST00000564390 SYNE3Q6ZMZ3 975 aa29.18■■■□□ 2.26
AC009041.3-201ENST00000564390 GPKOWQ92917 476 aaPredicted RBP eCLIP29.18■■■□□ 2.26
AC009041.3-201ENST00000564390 NOC4LQ9BVI4 516 aaKnown RBP29.18■■■□□ 2.26
AC009041.3-201ENST00000564390 FRMPD4Q14CM0 1322 aa29.18■■■□□ 2.26
AC009041.3-201ENST00000564390 TMEM199Q8N511 208 aa29.17■■■□□ 2.26
AC009041.3-201ENST00000564390 SMARCC2Q8TAQ2 1214 aa29.17■■■□□ 2.26
AC009041.3-201ENST00000564390 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.17■■■□□ 2.26
AC009041.3-201ENST00000564390 ACRP10323 421 aa29.16■■■□□ 2.26
AC009041.3-201ENST00000564390 CYP2C9P11712 490 aa29.16■■■□□ 2.26
AC009041.3-201ENST00000564390 CCL23P55773 120 aa29.16■■■□□ 2.26
AC009041.3-201ENST00000564390 CNTNAP5Q8WYK1 1306 aa29.16■■■□□ 2.26
AC009041.3-201ENST00000564390 KLF18A0A0U1RQI7 1052 aa29.15■■■□□ 2.26
AC009041.3-201ENST00000564390 C16orf59Q7L2K0 433 aa29.15■■■□□ 2.26
AC009041.3-201ENST00000564390 DHX37Q8IY37 1157 aaKnown RBP29.15■■■□□ 2.26
AC009041.3-201ENST00000564390 CUL5Q93034 780 aa29.15■■■□□ 2.26
AC009041.3-201ENST00000564390 JAKMIP1Q96N16 626 aaKnown RBP29.15■■■□□ 2.26
AC009041.3-201ENST00000564390 WNT8AQ9H1J5 351 aa29.15■■■□□ 2.26
AC009041.3-201ENST00000564390 SNX14Q9Y5W7 946 aa29.15■■■□□ 2.26
AC009041.3-201ENST00000564390 MEIS2O14770 477 aa29.14■■■□□ 2.26
AC009041.3-201ENST00000564390 ZBTB43O43298 467 aa29.14■■■□□ 2.26
AC009041.3-201ENST00000564390 UBA1P22314 1058 aaKnown RBP29.14■■■□□ 2.26
AC009041.3-201ENST00000564390 HSPA4P34932 840 aa29.14■■■□□ 2.26
AC009041.3-201ENST00000564390 MRPS9P82933 396 aaKnown RBP29.14■■■□□ 2.26
AC009041.3-201ENST00000564390 RTN1Q16799 776 aa29.14■■■□□ 2.26
AC009041.3-201ENST00000564390 HEATR3Q7Z4Q2 680 aa29.14■■■□□ 2.26
AC009041.3-201ENST00000564390 KCNB2Q92953 911 aa29.14■■■□□ 2.26
AC009041.3-201ENST00000564390 EMID1Q96A84 441 aaPredicted RBP29.14■■■□□ 2.26
AC009041.3-201ENST00000564390 NAP1L2Q9ULW6 460 aaPredicted RBP29.14■■■□□ 2.26
AC009041.3-201ENST00000564390 MYH7BA7E2Y1 1941 aa29.14■■■□□ 2.25
AC009041.3-201ENST00000564390 GOLGA8AA7E2F4 631 aa29.13■■■□□ 2.25
AC009041.3-201ENST00000564390 GOLGA8BA8MQT2 603 aa29.13■■■□□ 2.25
AC009041.3-201ENST00000564390 GGPS1O95749 300 aa29.13■■■□□ 2.25
AC009041.3-201ENST00000564390 ZNF286BP0CG31 522 aa29.13■■■□□ 2.25
AC009041.3-201ENST00000564390 SP2Q02086 613 aa29.13■■■□□ 2.25
AC009041.3-201ENST00000564390 LAMC2Q13753 1193 aa29.13■■■□□ 2.25
AC009041.3-201ENST00000564390 TMEM240Q5SV17 173 aa29.13■■■□□ 2.25
AC009041.3-201ENST00000564390 NFRKBQ6P4R8 1299 aa29.13■■■□□ 2.25
AC009041.3-201ENST00000564390 PPTC7Q8NI37 304 aa29.13■■■□□ 2.25
AC009041.3-201ENST00000564390 KAT2BQ92831 832 aa29.13■■■□□ 2.25
AC009041.3-201ENST00000564390 FAM161BQ96MY7 647 aa29.13■■■□□ 2.25
AC009041.3-201ENST00000564390 HMGB1P09429 215 aaKnown RBP29.12■■■□□ 2.25
AC009041.3-201ENST00000564390 CASTP20810 708 aaKnown RBP29.12■■■□□ 2.25
AC009041.3-201ENST00000564390 FGD1P98174 961 aa29.12■■■□□ 2.25
AC009041.3-201ENST00000564390 DGKDQ16760 1214 aa29.12■■■□□ 2.25
AC009041.3-201ENST00000564390 UBE2SQ16763 222 aa29.12■■■□□ 2.25
AC009041.3-201ENST00000564390 SCLYQ96I15 445 aa29.12■■■□□ 2.25
AC009041.3-201ENST00000564390 RBM28Q9NW13 759 aaKnown RBP29.12■■■□□ 2.25
AC009041.3-201ENST00000564390 MTMR10Q9NXD2 777 aa29.12■■■□□ 2.25
AC009041.3-201ENST00000564390 RTEL1Q9NZ71 1219 aa29.12■■■□□ 2.25
AC009041.3-201ENST00000564390 PIK3CDO00329 1044 aa29.11■■■□□ 2.25
AC009041.3-201ENST00000564390 REC8O95072 547 aa29.11■■■□□ 2.25
AC009041.3-201ENST00000564390 SUPT20HL2P0C7V6 817 aa29.11■■■□□ 2.25
AC009041.3-201ENST00000564390 CELF3Q5SZQ8 465 aaKnown RBP29.11■■■□□ 2.25
AC009041.3-201ENST00000564390 MYSM1Q5VVJ2 828 aa29.11■■■□□ 2.25
AC009041.3-201ENST00000564390 KCNV1Q6PIU1 500 aa29.11■■■□□ 2.25
AC009041.3-201ENST00000564390 ZNF365Q70YC5 407 aa29.11■■■□□ 2.25
AC009041.3-201ENST00000564390 SPATA33Q96N06 139 aa29.11■■■□□ 2.25
AC009041.3-201ENST00000564390 PSTPIP2Q9H939 334 aa29.11■■■□□ 2.25
AC009041.3-201ENST00000564390 IL23AQ9NPF7 189 aa29.11■■■□□ 2.25
AC009041.3-201ENST00000564390 SMAD3P84022 425 aaKnown RBP29.1■■■□□ 2.25
AC009041.3-201ENST00000564390 APOBRQ0VD83 1088 aa29.1■■■□□ 2.25
AC009041.3-201ENST00000564390 HSDL1Q3SXM5 330 aa29.1■■■□□ 2.25
AC009041.3-201ENST00000564390 WWC2Q6AWC2 1192 aa29.1■■■□□ 2.25
AC009041.3-201ENST00000564390 INPP4AQ96PE3 977 aaPredicted RBP29.1■■■□□ 2.25
AC009041.3-201ENST00000564390 BCAS3Q9H6U6 928 aa29.1■■■□□ 2.25
AC009041.3-201ENST00000564390 DOCK5Q9H7D0 1870 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms