RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 TMTC3Q6ZXV5 915 aa23.08■■□□□ 1.29
SHCBP1-203ENST00000564272 DHX32Q7L7V1 743 aaKnown RBP23.08■■□□□ 1.29
SHCBP1-203ENST00000564272 AFG1LQ8WV93 481 aa23.08■■□□□ 1.29
SHCBP1-203ENST00000564272 ZFP91Q96JP5 570 aaPredicted RBP23.08■■□□□ 1.29
SHCBP1-203ENST00000564272 SEZ6LQ9BYH1 1024 aa23.08■■□□□ 1.29
SHCBP1-203ENST00000564272 ALDH8A1Q9H2A2 487 aaPredicted RBP23.08■■□□□ 1.29
SHCBP1-203ENST00000564272 MRVI1Q9Y6F6 885 aa23.08■■□□□ 1.29
SHCBP1-203ENST00000564272 UMODL1Q5DID0 1318 aa23.08■■□□□ 1.28
SHCBP1-203ENST00000564272 hCG_1642624A0A1W2PR95 340 aa23.07■■□□□ 1.28
SHCBP1-203ENST00000564272 MMP3P08254 477 aa23.07■■□□□ 1.28
SHCBP1-203ENST00000564272 CYP2C18P33260 490 aa23.07■■□□□ 1.28
SHCBP1-203ENST00000564272 KRT32Q14532 448 aa23.07■■□□□ 1.28
SHCBP1-203ENST00000564272 GPR153Q6NV75 609 aa23.07■■□□□ 1.28
SHCBP1-203ENST00000564272 APOA5Q6Q788 366 aa23.07■■□□□ 1.28
SHCBP1-203ENST00000564272 VSIG10LQ86VR7 867 aa23.07■■□□□ 1.28
SHCBP1-203ENST00000564272 CCDC82Q8N4S0 544 aa23.07■■□□□ 1.28
SHCBP1-203ENST00000564272 FANCBQ8NB91 859 aa23.07■■□□□ 1.28
SHCBP1-203ENST00000564272 TRMT13Q9NUP7 481 aaKnown RBP23.07■■□□□ 1.28
SHCBP1-203ENST00000564272 DDX41Q9UJV9 622 aaKnown RBP23.07■■□□□ 1.28
SHCBP1-203ENST00000564272 CSF2RAP15509 400 aa23.06■■□□□ 1.28
SHCBP1-203ENST00000564272 CCND2P30279 289 aa23.06■■□□□ 1.28
SHCBP1-203ENST00000564272 NBPF20Q3BBV1 942 aa23.06■■□□□ 1.28
SHCBP1-203ENST00000564272 DEFB123Q8N688 67 aa23.06■■□□□ 1.28
SHCBP1-203ENST00000564272 RNPC3Q96LT9 517 aaKnown RBP23.06■■□□□ 1.28
SHCBP1-203ENST00000564272 HIPK3Q9H422 1215 aa23.06■■□□□ 1.28
SHCBP1-203ENST00000564272 BRPF3Q9ULD4 1205 aa23.06■■□□□ 1.28
SHCBP1-203ENST00000564272 FRMPD4Q14CM0 1322 aa23.06■■□□□ 1.28
SHCBP1-203ENST00000564272 SORBS3O60504 671 aa23.05■■□□□ 1.28
SHCBP1-203ENST00000564272 KPNA6O60684 536 aa23.05■■□□□ 1.28
SHCBP1-203ENST00000564272 CPA1P15085 419 aa23.05■■□□□ 1.28
SHCBP1-203ENST00000564272 FAM47CQ5HY64 1035 aa23.05■■□□□ 1.28
SHCBP1-203ENST00000564272 SYNE3Q6ZMZ3 975 aa23.05■■□□□ 1.28
SHCBP1-203ENST00000564272 NOC4LQ9BVI4 516 aaKnown RBP23.05■■□□□ 1.28
SHCBP1-203ENST00000564272 HSPA4P34932 840 aa23.04■■□□□ 1.28
SHCBP1-203ENST00000564272 CHMP4BP1P59074 171 aa23.04■■□□□ 1.28
SHCBP1-203ENST00000564272 PPIGQ13427 754 aaKnown RBP eCLIP23.04■■□□□ 1.28
SHCBP1-203ENST00000564272 USP17L6PQ6QN14 398 aa23.04■■□□□ 1.28
SHCBP1-203ENST00000564272 TMEM199Q8N511 208 aa23.04■■□□□ 1.28
SHCBP1-203ENST00000564272 GPKOWQ92917 476 aaPredicted RBP eCLIP23.04■■□□□ 1.28
SHCBP1-203ENST00000564272 KCNB2Q92953 911 aa23.04■■□□□ 1.28
SHCBP1-203ENST00000564272 MEIS2O14770 477 aa23.03■■□□□ 1.28
SHCBP1-203ENST00000564272 ACRP10323 421 aa23.03■■□□□ 1.28
SHCBP1-203ENST00000564272 C16orf59Q7L2K0 433 aa23.03■■□□□ 1.28
SHCBP1-203ENST00000564272 SMARCC2Q8TAQ2 1214 aa23.03■■□□□ 1.28
SHCBP1-203ENST00000564272 CUL5Q93034 780 aa23.03■■□□□ 1.28
SHCBP1-203ENST00000564272 EMID1Q96A84 441 aaPredicted RBP23.03■■□□□ 1.28
SHCBP1-203ENST00000564272 JAKMIP1Q96N16 626 aaKnown RBP23.03■■□□□ 1.28
SHCBP1-203ENST00000564272 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.03■■□□□ 1.28
SHCBP1-203ENST00000564272 SNX14Q9Y5W7 946 aa23.03■■□□□ 1.28
SHCBP1-203ENST00000564272 CNTNAP5Q8WYK1 1306 aa23.03■■□□□ 1.28
SHCBP1-203ENST00000564272 MYH7BA7E2Y1 1941 aa23.02■■□□□ 1.28
SHCBP1-203ENST00000564272 KLF18A0A0U1RQI7 1052 aa23.02■■□□□ 1.28
SHCBP1-203ENST00000564272 ZBTB43O43298 467 aa23.02■■□□□ 1.28
SHCBP1-203ENST00000564272 CYP2C9P11712 490 aa23.02■■□□□ 1.28
SHCBP1-203ENST00000564272 UBA1P22314 1058 aaKnown RBP23.02■■□□□ 1.28
SHCBP1-203ENST00000564272 CCL23P55773 120 aa23.02■■□□□ 1.28
SHCBP1-203ENST00000564272 RTN1Q16799 776 aa23.02■■□□□ 1.28
SHCBP1-203ENST00000564272 NFRKBQ6P4R8 1299 aa23.02■■□□□ 1.28
SHCBP1-203ENST00000564272 DHX37Q8IY37 1157 aaKnown RBP23.02■■□□□ 1.28
SHCBP1-203ENST00000564272 WNT8AQ9H1J5 351 aa23.02■■□□□ 1.28
SHCBP1-203ENST00000564272 PIK3CDO00329 1044 aa23.01■■□□□ 1.27
SHCBP1-203ENST00000564272 GGPS1O95749 300 aa23.01■■□□□ 1.27
SHCBP1-203ENST00000564272 HMGB1P09429 215 aaKnown RBP23.01■■□□□ 1.27
SHCBP1-203ENST00000564272 MRPS9P82933 396 aaKnown RBP23.01■■□□□ 1.27
SHCBP1-203ENST00000564272 SP2Q02086 613 aa23.01■■□□□ 1.27
SHCBP1-203ENST00000564272 LAMC2Q13753 1193 aa23.01■■□□□ 1.27
SHCBP1-203ENST00000564272 TMEM240Q5SV17 173 aa23.01■■□□□ 1.27
SHCBP1-203ENST00000564272 HEATR3Q7Z4Q2 680 aa23.01■■□□□ 1.27
SHCBP1-203ENST00000564272 PPTC7Q8NI37 304 aa23.01■■□□□ 1.27
SHCBP1-203ENST00000564272 KAT2BQ92831 832 aa23.01■■□□□ 1.27
SHCBP1-203ENST00000564272 RBM28Q9NW13 759 aaKnown RBP23.01■■□□□ 1.27
SHCBP1-203ENST00000564272 GOLGA8AA7E2F4 631 aa23■■□□□ 1.27
SHCBP1-203ENST00000564272 GOLGA8BA8MQT2 603 aa23■■□□□ 1.27
SHCBP1-203ENST00000564272 REC8O95072 547 aa23■■□□□ 1.27
SHCBP1-203ENST00000564272 ZNF286BP0CG31 522 aa23■■□□□ 1.27
SHCBP1-203ENST00000564272 DGKDQ16760 1214 aa23■■□□□ 1.27
SHCBP1-203ENST00000564272 CELF3Q5SZQ8 465 aaKnown RBP23■■□□□ 1.27
SHCBP1-203ENST00000564272 KCNV1Q6PIU1 500 aa23■■□□□ 1.27
SHCBP1-203ENST00000564272 PSTPIP2Q9H939 334 aa23■■□□□ 1.27
SHCBP1-203ENST00000564272 MTMR10Q9NXD2 777 aa23■■□□□ 1.27
SHCBP1-203ENST00000564272 RTEL1Q9NZ71 1219 aa23■■□□□ 1.27
SHCBP1-203ENST00000564272 NAP1L2Q9ULW6 460 aaPredicted RBP23■■□□□ 1.27
SHCBP1-203ENST00000564272 SUPT20HL2P0C7V6 817 aa22.99■■□□□ 1.27
SHCBP1-203ENST00000564272 CASTP20810 708 aaKnown RBP22.99■■□□□ 1.27
SHCBP1-203ENST00000564272 SMAD3P84022 425 aaKnown RBP22.99■■□□□ 1.27
SHCBP1-203ENST00000564272 FGD1P98174 961 aa22.99■■□□□ 1.27
SHCBP1-203ENST00000564272 FUT2Q10981 343 aa22.99■■□□□ 1.27
SHCBP1-203ENST00000564272 UBE2SQ16763 222 aa22.99■■□□□ 1.27
SHCBP1-203ENST00000564272 MYSM1Q5VVJ2 828 aa22.99■■□□□ 1.27
SHCBP1-203ENST00000564272 WWC2Q6AWC2 1192 aa22.99■■□□□ 1.27
SHCBP1-203ENST00000564272 ZNF365Q70YC5 407 aa22.99■■□□□ 1.27
SHCBP1-203ENST00000564272 SCLYQ96I15 445 aa22.99■■□□□ 1.27
SHCBP1-203ENST00000564272 SPATA33Q96N06 139 aa22.99■■□□□ 1.27
SHCBP1-203ENST00000564272 INPP4AQ96PE3 977 aaPredicted RBP22.99■■□□□ 1.27
SHCBP1-203ENST00000564272 IL23AQ9NPF7 189 aa22.99■■□□□ 1.27
SHCBP1-203ENST00000564272 PPP4R2Q9NY27 417 aa22.99■■□□□ 1.27
SHCBP1-203ENST00000564272 LAMA2P24043 3122 aaKnown RBP22.99■■□□□ 1.27
SHCBP1-203ENST00000564272 PTPN11Q06124 597 aaPredicted RBP22.98■■□□□ 1.27
SHCBP1-203ENST00000564272 APOBRQ0VD83 1088 aa22.98■■□□□ 1.27
SHCBP1-203ENST00000564272 SEMA3FQ13275 785 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms