RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 RNF180Q86T96 592 aa19.09■□□□□ 0.65
RNF40-206ENST00000564260 CCDC83Q8IWF9 413 aa19.09■□□□□ 0.65
RNF40-206ENST00000564260 FBXO16Q8IX29 292 aaPredicted RBP19.09■□□□□ 0.65
RNF40-206ENST00000564260 ALG1Q9BT22 464 aa19.09■□□□□ 0.65
RNF40-206ENST00000564260 PHF20Q9BVI0 1012 aa19.09■□□□□ 0.65
RNF40-206ENST00000564260 ANO3Q9BYT9 981 aa19.09■□□□□ 0.65
RNF40-206ENST00000564260 UPF3AQ9H1J1 476 aaKnown RBP19.09■□□□□ 0.65
RNF40-206ENST00000564260 BRMS1Q9HCU9 246 aa19.09■□□□□ 0.65
RNF40-206ENST00000564260 XPNPEP3Q9NQH7 507 aa19.09■□□□□ 0.65
RNF40-206ENST00000564260 GNEQ9Y223 722 aaKnown RBP19.09■□□□□ 0.65
RNF40-206ENST00000564260 POTEFA5A3E0 1075 aa19.08■□□□□ 0.64
RNF40-206ENST00000564260 GJA9P57773 515 aa19.08■□□□□ 0.64
RNF40-206ENST00000564260 UBE2SQ16763 222 aa19.08■□□□□ 0.64
RNF40-206ENST00000564260 NLRX1Q86UT6 975 aa19.08■□□□□ 0.64
RNF40-206ENST00000564260 GPRASP2Q96D09 838 aa19.08■□□□□ 0.64
RNF40-206ENST00000564260 TSEN34Q9BSV6 310 aaKnown RBP19.08■□□□□ 0.64
RNF40-206ENST00000564260 WDR11Q9BZH6 1224 aa19.08■□□□□ 0.64
RNF40-206ENST00000564260 FIBPO43427 364 aa19.07■□□□□ 0.64
RNF40-206ENST00000564260 MYCP01106 439 aaPredicted RBP19.07■□□□□ 0.64
RNF40-206ENST00000564260 CYP3A4P08684 503 aa19.07■□□□□ 0.64
RNF40-206ENST00000564260 BRDTQ58F21 947 aaPredicted RBP19.07■□□□□ 0.64
RNF40-206ENST00000564260 CCDC62Q6P9F0 684 aa19.07■□□□□ 0.64
RNF40-206ENST00000564260 NIPA1Q7RTP0 329 aa19.07■□□□□ 0.64
RNF40-206ENST00000564260 BLIDQ8IZY5 108 aa19.07■□□□□ 0.64
RNF40-206ENST00000564260 PCSK9Q8NBP7 692 aaKnown RBP19.07■□□□□ 0.64
RNF40-206ENST00000564260 GIMAP8Q8ND71 665 aaPredicted RBP19.07■□□□□ 0.64
RNF40-206ENST00000564260 EMID1Q96A84 441 aaPredicted RBP19.07■□□□□ 0.64
RNF40-206ENST00000564260 SHISA4Q96DD7 197 aa19.07■□□□□ 0.64
RNF40-206ENST00000564260 SENP7Q9BQF6 1050 aa19.07■□□□□ 0.64
RNF40-206ENST00000564260 MOXD2PA6NHM9 499 aa19.06■□□□□ 0.64
RNF40-206ENST00000564260 M0R2N6 131 aa19.06■□□□□ 0.64
RNF40-206ENST00000564260 ADAMTS4O75173 837 aa19.06■□□□□ 0.64
RNF40-206ENST00000564260 MYCLP12524 364 aaPredicted RBP19.06■□□□□ 0.64
RNF40-206ENST00000564260 ADCYAP1R1P41586 468 aa19.06■□□□□ 0.64
RNF40-206ENST00000564260 USP11P51784 963 aa19.06■□□□□ 0.64
RNF40-206ENST00000564260 MRPS9P82933 396 aaKnown RBP19.06■□□□□ 0.64
RNF40-206ENST00000564260 CUL4AQ13619 759 aa19.06■□□□□ 0.64
RNF40-206ENST00000564260 EEPD1Q7L9B9 569 aa19.06■□□□□ 0.64
RNF40-206ENST00000564260 KRT25Q7Z3Z0 450 aa19.06■□□□□ 0.64
RNF40-206ENST00000564260 UBE2Q1Q7Z7E8 422 aa19.06■□□□□ 0.64
RNF40-206ENST00000564260 FAM184AQ8NB25 1140 aa19.06■□□□□ 0.64
RNF40-206ENST00000564260 CRYGNQ8WXF5 182 aa19.06■□□□□ 0.64
RNF40-206ENST00000564260 INTS4Q96HW7 963 aaKnown RBP19.06■□□□□ 0.64
RNF40-206ENST00000564260 SEZ6LQ9BYH1 1024 aa19.06■□□□□ 0.64
RNF40-206ENST00000564260 AP5M1Q9H0R1 490 aa19.06■□□□□ 0.64
RNF40-206ENST00000564260 MRVI1Q9Y6F6 885 aa19.06■□□□□ 0.64
RNF40-206ENST00000564260 SYNRGQ9UMZ2 1314 aa19.05■□□□□ 0.64
RNF40-206ENST00000564260 KBTBD13C9JR72 458 aa19.05■□□□□ 0.64
RNF40-206ENST00000564260 ZEB2O60315 1214 aa19.05■□□□□ 0.64
RNF40-206ENST00000564260 JAK2O60674 1132 aa19.05■□□□□ 0.64
RNF40-206ENST00000564260 FARP2O94887 1054 aaPredicted RBP19.05■□□□□ 0.64
RNF40-206ENST00000564260 CD2BP2O95400 341 aaKnown RBP19.05■□□□□ 0.64
RNF40-206ENST00000564260 TXNP10599 105 aaKnown RBP19.05■□□□□ 0.64
RNF40-206ENST00000564260 SMPD1P17405 629 aa19.05■□□□□ 0.64
RNF40-206ENST00000564260 EN2P19622 333 aaPredicted RBP19.05■□□□□ 0.64
RNF40-206ENST00000564260 CPT1AP50416 773 aa19.05■□□□□ 0.64
RNF40-206ENST00000564260 SOX10P56693 466 aa19.05■□□□□ 0.64
RNF40-206ENST00000564260 NPY5RQ15761 445 aa19.05■□□□□ 0.64
RNF40-206ENST00000564260 TLK2Q86UE8 772 aa19.05■□□□□ 0.64
RNF40-206ENST00000564260 KLHDC9Q8NEP7 349 aa19.05■□□□□ 0.64
RNF40-206ENST00000564260 IL31RAQ8NI17 732 aa19.05■□□□□ 0.64
RNF40-206ENST00000564260 NAP1L4Q99733 375 aaKnown RBP19.05■□□□□ 0.64
RNF40-206ENST00000564260 DDX41Q9UJV9 622 aaKnown RBP19.05■□□□□ 0.64
RNF40-206ENST00000564260 UBIAD1Q9Y5Z9 338 aa19.05■□□□□ 0.64
RNF40-206ENST00000564260 KIAA0100Q14667 2235 aaKnown RBP19.05■□□□□ 0.64
RNF40-206ENST00000564260 SPATA31C2B4DYI2 1134 aa19.04■□□□□ 0.64
RNF40-206ENST00000564260 KPNA6O60684 536 aa19.04■□□□□ 0.64
RNF40-206ENST00000564260 PPFIA3O75145 1194 aa19.04■□□□□ 0.64
RNF40-206ENST00000564260 MMP1P03956 469 aa19.04■□□□□ 0.64
RNF40-206ENST00000564260 CIITAP33076 1130 aa19.04■□□□□ 0.64
RNF40-206ENST00000564260 ARHGAP4P98171 946 aa19.04■□□□□ 0.64
RNF40-206ENST00000564260 SETQ01105 290 aaPredicted RBP19.04■□□□□ 0.64
RNF40-206ENST00000564260 LAMC2Q13753 1193 aa19.04■□□□□ 0.64
RNF40-206ENST00000564260 NEDD9Q14511 834 aa19.04■□□□□ 0.64
RNF40-206ENST00000564260 LRRC41Q15345 812 aa19.04■□□□□ 0.64
RNF40-206ENST00000564260 SAFBQ15424 915 aaKnown RBP eCLIP19.04■□□□□ 0.64
RNF40-206ENST00000564260 CEP55Q53EZ4 464 aa19.04■□□□□ 0.64
RNF40-206ENST00000564260 IFFO2Q5TF58 517 aa19.04■□□□□ 0.64
RNF40-206ENST00000564260 MOXD1Q6UVY6 613 aa19.04■□□□□ 0.64
RNF40-206ENST00000564260 NECAB2Q7Z6G3 386 aa19.04■□□□□ 0.64
RNF40-206ENST00000564260 AIFM3Q96NN9 605 aa19.04■□□□□ 0.64
RNF40-206ENST00000564260 JADE2Q9NQC1 790 aa19.04■□□□□ 0.64
RNF40-206ENST00000564260 PDGFCQ9NRA1 345 aa19.04■□□□□ 0.64
RNF40-206ENST00000564260 K7ELQ4 463 aaPredicted RBP19.03■□□□□ 0.64
RNF40-206ENST00000564260 CABYRO75952 493 aa19.03■□□□□ 0.64
RNF40-206ENST00000564260 RGS20O76081 388 aa19.03■□□□□ 0.64
RNF40-206ENST00000564260 GH1P01241 217 aa19.03■□□□□ 0.64
RNF40-206ENST00000564260 KRT2P35908 639 aa19.03■□□□□ 0.64
RNF40-206ENST00000564260 JAKMIP3Q5VZ66 844 aa19.03■□□□□ 0.64
RNF40-206ENST00000564260 SEPT14Q6ZU15 432 aa19.03■□□□□ 0.64
RNF40-206ENST00000564260 FBXO18Q8NFZ0 1043 aa19.03■□□□□ 0.64
RNF40-206ENST00000564260 C8orf76Q96K31 380 aa19.03■□□□□ 0.64
RNF40-206ENST00000564260 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.02■□□□□ 0.64
RNF40-206ENST00000564260 A6NJR5 290 aa19.02■□□□□ 0.64
RNF40-206ENST00000564260 ADCY6O43306 1168 aa19.02■□□□□ 0.64
RNF40-206ENST00000564260 COL6A1P12109 1028 aa19.02■□□□□ 0.64
RNF40-206ENST00000564260 PDIA4P13667 645 aaKnown RBP19.02■□□□□ 0.64
RNF40-206ENST00000564260 MTMR1Q13613 665 aa19.02■□□□□ 0.64
RNF40-206ENST00000564260 NONOQ15233 471 aaKnown RBP eCLIP19.02■□□□□ 0.64
RNF40-206ENST00000564260 FSCN1Q16658 493 aaKnown RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms