RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 ATL3Q6DD88 541 aa19.32■□□□□ 0.68
CMTM3-208ENST00000564247 FCHSD1Q86WN1 690 aa19.32■□□□□ 0.68
CMTM3-208ENST00000564247 ANKRD35Q8N283 1001 aa19.32■□□□□ 0.68
CMTM3-208ENST00000564247 TNFRSF25Q93038 417 aa19.32■□□□□ 0.68
CMTM3-208ENST00000564247 HTATIP2Q9BUP3 242 aa19.32■□□□□ 0.68
CMTM3-208ENST00000564247 TMEM260Q9NX78 707 aa19.32■□□□□ 0.68
CMTM3-208ENST00000564247 MSCO60682 206 aa19.31■□□□□ 0.68
CMTM3-208ENST00000564247 GHRHRQ02643 423 aa19.31■□□□□ 0.68
CMTM3-208ENST00000564247 BAATQ14032 418 aaPredicted RBP19.31■□□□□ 0.68
CMTM3-208ENST00000564247 FOXD4L6Q3SYB3 417 aaPredicted RBP19.31■□□□□ 0.68
CMTM3-208ENST00000564247 MYSM1Q5VVJ2 828 aa19.31■□□□□ 0.68
CMTM3-208ENST00000564247 FOXD4L3Q6VB84 417 aaPredicted RBP19.31■□□□□ 0.68
CMTM3-208ENST00000564247 TRPV1Q8NER1 839 aa19.31■□□□□ 0.68
CMTM3-208ENST00000564247 PFASO15067 1338 aa19.3■□□□□ 0.68
CMTM3-208ENST00000564247 DNAJC25-GNG10A0A024R161 153 aa19.3■□□□□ 0.68
CMTM3-208ENST00000564247 ADAMTS3O15072 1205 aa19.3■□□□□ 0.68
CMTM3-208ENST00000564247 TRAPPC10P48553 1259 aa19.3■□□□□ 0.68
CMTM3-208ENST00000564247 MNX1P50219 401 aaPredicted RBP19.3■□□□□ 0.68
CMTM3-208ENST00000564247 RPS6P62753 249 aaKnown RBP19.3■□□□□ 0.68
CMTM3-208ENST00000564247 NECAB2Q7Z6G3 386 aa19.3■□□□□ 0.68
CMTM3-208ENST00000564247 PAWRQ96IZ0 340 aaKnown RBP19.3■□□□□ 0.68
CMTM3-208ENST00000564247 DDX20Q9UHI6 824 aaKnown RBP19.3■□□□□ 0.68
CMTM3-208ENST00000564247 NRBP1Q9UHY1 535 aa19.3■□□□□ 0.68
CMTM3-208ENST00000564247 CFAP45Q9UL16 551 aa19.3■□□□□ 0.68
CMTM3-208ENST00000564247 CNGA1P29973 690 aa19.29■□□□□ 0.68
CMTM3-208ENST00000564247 FAM173BQ6P4H8 233 aa19.29■□□□□ 0.68
CMTM3-208ENST00000564247 SYTL5Q8TDW5 730 aaPredicted RBP19.29■□□□□ 0.68
CMTM3-208ENST00000564247 DIS3LQ8TF46 1054 aaKnown RBP19.29■□□□□ 0.68
CMTM3-208ENST00000564247 GBP4Q96PP9 640 aa19.29■□□□□ 0.68
CMTM3-208ENST00000564247 TINF2Q9BSI4 451 aa19.29■□□□□ 0.68
CMTM3-208ENST00000564247 ANO3Q9BYT9 981 aa19.29■□□□□ 0.68
CMTM3-208ENST00000564247 A1CFQ9NQ94 594 aaKnown RBP19.29■□□□□ 0.68
CMTM3-208ENST00000564247 CYP39A1Q9NYL5 469 aa19.29■□□□□ 0.68
CMTM3-208ENST00000564247 NCLP19338 710 aaKnown RBP19.28■□□□□ 0.68
CMTM3-208ENST00000564247 ATP2B1P20020 1258 aa19.28■□□□□ 0.68
CMTM3-208ENST00000564247 KRT85P78386 507 aa19.28■□□□□ 0.68
CMTM3-208ENST00000564247 DNM1Q05193 864 aaKnown RBP19.28■□□□□ 0.68
CMTM3-208ENST00000564247 INF2Q27J81 1249 aa19.28■□□□□ 0.68
CMTM3-208ENST00000564247 EARS2Q5JPH6 523 aaKnown RBP19.28■□□□□ 0.68
CMTM3-208ENST00000564247 ZNF467Q7Z7K2 595 aaPredicted RBP19.28■□□□□ 0.68
CMTM3-208ENST00000564247 MSL3Q8N5Y2 521 aaKnown RBP19.28■□□□□ 0.68
CMTM3-208ENST00000564247 TBCKQ8TEA7 893 aa19.28■□□□□ 0.68
CMTM3-208ENST00000564247 DPF3Q92784 378 aa19.28■□□□□ 0.68
CMTM3-208ENST00000564247 NAP1L4Q99733 375 aaKnown RBP19.28■□□□□ 0.68
CMTM3-208ENST00000564247 POTEB2H3BUK9 544 aa19.27■□□□□ 0.68
CMTM3-208ENST00000564247 SEPT4O43236 478 aa19.27■□□□□ 0.68
CMTM3-208ENST00000564247 USP11P51784 963 aa19.27■□□□□ 0.68
CMTM3-208ENST00000564247 MAMDC4Q6UXC1 1216 aa19.27■□□□□ 0.68
CMTM3-208ENST00000564247 SLC30A10Q6XR72 485 aa19.27■□□□□ 0.68
CMTM3-208ENST00000564247 NEK8Q86SG6 692 aa19.27■□□□□ 0.68
CMTM3-208ENST00000564247 PGBD1Q96JS3 809 aa19.27■□□□□ 0.68
CMTM3-208ENST00000564247 TFIP11Q9UBB9 837 aaKnown RBP19.27■□□□□ 0.68
CMTM3-208ENST00000564247 CEP131Q9UPN4 1083 aa19.27■□□□□ 0.68
CMTM3-208ENST00000564247 DNAH12Q6ZR08 3092 aa19.27■□□□□ 0.68
CMTM3-208ENST00000564247 CEP290O15078 2479 aa19.27■□□□□ 0.67
CMTM3-208ENST00000564247 ALPK3Q96L96 1907 aa19.26■□□□□ 0.67
CMTM3-208ENST00000564247 FAM205CA6NFA0 338 aa19.26■□□□□ 0.67
CMTM3-208ENST00000564247 B4DLN1 442 aa19.26■□□□□ 0.67
CMTM3-208ENST00000564247 TTC38Q5R3I4 469 aa19.26■□□□□ 0.67
CMTM3-208ENST00000564247 PRAMEF19Q5SWL8 479 aa19.26■□□□□ 0.67
CMTM3-208ENST00000564247 ARHGEF16Q5VV41 709 aa19.26■□□□□ 0.67
CMTM3-208ENST00000564247 TAAR1Q96RJ0 339 aa19.26■□□□□ 0.67
CMTM3-208ENST00000564247 RMDN3Q96TC7 470 aa19.26■□□□□ 0.67
CMTM3-208ENST00000564247 MPHOSPH6Q99547 160 aaKnown RBP19.26■□□□□ 0.67
CMTM3-208ENST00000564247 C11orf49Q9H6J7 331 aa19.26■□□□□ 0.67
CMTM3-208ENST00000564247 ADD3Q9UEY8 706 aaKnown RBP19.26■□□□□ 0.67
CMTM3-208ENST00000564247 SYNGAP1Q96PV0 1343 aa19.25■□□□□ 0.67
CMTM3-208ENST00000564247 BAG4O95429 457 aaKnown RBP19.25■□□□□ 0.67
CMTM3-208ENST00000564247 ZNF76P36508 570 aa19.25■□□□□ 0.67
CMTM3-208ENST00000564247 SREBF1P36956 1147 aa19.25■□□□□ 0.67
CMTM3-208ENST00000564247 CSPP1Q1MSJ5 1256 aa19.25■□□□□ 0.67
CMTM3-208ENST00000564247 LETM2Q2VYF4 491 aa19.25■□□□□ 0.67
CMTM3-208ENST00000564247 ANO1Q5XXA6 986 aa19.25■□□□□ 0.67
CMTM3-208ENST00000564247 DNERQ8NFT8 737 aa19.25■□□□□ 0.67
CMTM3-208ENST00000564247 NSUN6Q8TEA1 469 aaKnown RBP19.25■□□□□ 0.67
CMTM3-208ENST00000564247 MCM3APO60318 1980 aa19.24■□□□□ 0.67
CMTM3-208ENST00000564247 CCNT1O60563 726 aaKnown RBP19.24■□□□□ 0.67
CMTM3-208ENST00000564247 BMP15O95972 392 aa19.24■□□□□ 0.67
CMTM3-208ENST00000564247 COL6A1P12109 1028 aa19.24■□□□□ 0.67
CMTM3-208ENST00000564247 TOB1P50616 345 aaPredicted RBP19.24■□□□□ 0.67
CMTM3-208ENST00000564247 ARHGAP4P98171 946 aa19.24■□□□□ 0.67
CMTM3-208ENST00000564247 CEBPZQ03701 1054 aaKnown RBP19.24■□□□□ 0.67
CMTM3-208ENST00000564247 ORC2Q13416 577 aaPredicted RBP19.24■□□□□ 0.67
CMTM3-208ENST00000564247 ZNF174Q15697 407 aa19.24■□□□□ 0.67
CMTM3-208ENST00000564247 CLEC17AQ6ZS10 378 aa19.24■□□□□ 0.67
CMTM3-208ENST00000564247 FAM133AQ8N9E0 248 aa19.24■□□□□ 0.67
CMTM3-208ENST00000564247 FGD4Q96M96 766 aa19.24■□□□□ 0.67
CMTM3-208ENST00000564247 USP28Q96RU2 1077 aa19.24■□□□□ 0.67
CMTM3-208ENST00000564247 SCAND2PQ9GZW5 306 aaPredicted RBP19.24■□□□□ 0.67
CMTM3-208ENST00000564247 PXMP2Q9NR77 195 aa19.24■□□□□ 0.67
CMTM3-208ENST00000564247 RTEL1Q9NZ71 1219 aa19.24■□□□□ 0.67
CMTM3-208ENST00000564247 COL20A1Q9P218 1284 aa19.24■□□□□ 0.67
CMTM3-208ENST00000564247 CNPY2Q9Y2B0 182 aa19.24■□□□□ 0.67
CMTM3-208ENST00000564247 TCHHQ07283 1943 aa19.23■□□□□ 0.67
CMTM3-208ENST00000564247 GOLGA6L22H0YM25 854 aa19.23■□□□□ 0.67
CMTM3-208ENST00000564247 CYP3A4P08684 503 aa19.23■□□□□ 0.67
CMTM3-208ENST00000564247 ZNF865P0CJ78 1059 aaPredicted RBP19.23■□□□□ 0.67
CMTM3-208ENST00000564247 GCFC2P16383 781 aaKnown RBP19.23■□□□□ 0.67
CMTM3-208ENST00000564247 STK38Q15208 465 aa19.23■□□□□ 0.67
CMTM3-208ENST00000564247 SF3A1Q15459 793 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms