RNA–Protein interactions for RNA: ENST00000564079.5

TUBGCP4-208, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TUBGCP4, Length 6,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-208ENST00000564079 HMGCS2P54868 508 aa13.17□□□□□ -0.3
TUBGCP4-208ENST00000564079 FYB2Q5VWT5 728 aa13.17□□□□□ -0.3
TUBGCP4-208ENST00000564079 DDX53Q86TM3 631 aaKnown RBP13.17□□□□□ -0.3
TUBGCP4-208ENST00000564079 ACCSQ96QU6 501 aa13.17□□□□□ -0.3
TUBGCP4-208ENST00000564079 NUP58Q9BVL2 599 aa13.17□□□□□ -0.3
TUBGCP4-208ENST00000564079 SGSM2O43147 1006 aa13.17□□□□□ -0.3
TUBGCP4-208ENST00000564079 SREBF2Q12772 1141 aa13.17□□□□□ -0.3
TUBGCP4-208ENST00000564079 HHATQ5VTY9 493 aa13.17□□□□□ -0.3
TUBGCP4-208ENST00000564079 GOLGA8IPA6NC78 632 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 GOLGA8JA6NMD2 632 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 ERVV-1B6SEH8 477 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 NOL3O60936 208 aaKnown RBP13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 ATP5DP30049 168 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 NNMTP40261 264 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 TSPY1Q01534 308 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 ATP2A3Q93084 1043 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 WDR11Q9BZH6 1224 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 RBSNQ9H1K0 784 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 ERBB3P21860 1342 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 C8orf74Q6P047 294 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 RHPN2Q8IUC4 686 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 PTK2Q05397 1052 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 ANGEL2Q5VTE6 544 aaKnown RBP13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 TMEM179Q6ZVK1 233 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 RAPH1Q70E73 1250 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 INTS8Q75QN2 995 aaKnown RBP13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 ARMCX2Q7L311 632 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 SLC4A7Q9Y6M7 1214 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 ZMYM6O95789 1325 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 ERBB4Q15303 1308 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 CIITAP33076 1130 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 IQCB1Q15051 598 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 TBCKQ8TEA7 893 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 MSTO1Q9BUK6 570 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 FBXO40Q9UH90 709 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 ABCB11O95342 1321 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 PARD3Q8TEW0 1356 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 TRIM14Q14142 442 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 DCAF4L1Q3SXM0 396 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 GKAP1Q5VSY0 366 aaPredicted RBP13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 ATL3Q6DD88 541 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 RRAGCQ9HB90 399 aa13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 ZBTB12Q9Y330 459 aaPredicted RBP13.16□□□□□ -0.3
TUBGCP4-208ENST00000564079 SYCE1Q8N0S2 351 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 ARFGAP3Q9NP61 516 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 SOS2Q07890 1332 aaPredicted RBP13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 ROBO2Q9HCK4 1378 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 HEG1Q9ULI3 1381 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 KDM5DQ9BY66 1539 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 KDM5CP41229 1560 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 I3L4J1 428 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 CIB2O75838 187 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 LMNB1P20700 586 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 POLR2FP61218 127 aaKnown RBP13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 KLHL40Q2TBA0 621 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 ACBD5Q5T8D3 534 aaPredicted RBP13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 NT5C1BQ96P26 610 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 TTC1Q99614 292 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 ATG3Q9NT62 314 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 RNF146Q9NTX7 359 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 TLR7Q9NYK1 1049 aaKnown RBP13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 GGA3Q9NZ52 723 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 IVLP07476 585 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 SOX5P35711 763 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 SCARF1Q14162 830 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 CCDC85CA6NKD9 419 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 ACTN1P12814 892 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 ADCY1Q08828 1119 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 ANTXR1Q9H6X2 564 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 DYNLT1P63172 113 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 CACNB2Q08289 660 aaPredicted RBP13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 MTMR1Q13613 665 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 SEPT2Q15019 361 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 LRRC41Q15345 812 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 CDO1Q16878 200 aa13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 RPAP3Q9H6T3 665 aaPredicted RBP13.15□□□□□ -0.3
TUBGCP4-208ENST00000564079 ARHGAP4P98171 946 aa13.15□□□□□ -0.31
TUBGCP4-208ENST00000564079 SNAPC2Q13487 334 aa13.15□□□□□ -0.31
TUBGCP4-208ENST00000564079 RPS6KA1Q15418 735 aa13.15□□□□□ -0.31
TUBGCP4-208ENST00000564079 MYSM1Q5VVJ2 828 aa13.15□□□□□ -0.31
TUBGCP4-208ENST00000564079 NOSTRINQ8IVI9 506 aa13.15□□□□□ -0.31
TUBGCP4-208ENST00000564079 RILPQ96NA2 401 aa13.15□□□□□ -0.31
TUBGCP4-208ENST00000564079 DOLKQ9UPQ8 538 aa13.15□□□□□ -0.31
TUBGCP4-208ENST00000564079 K7ERI5 159 aa13.14□□□□□ -0.31
TUBGCP4-208ENST00000564079 SRGAP2BP0DMP2 458 aa13.14□□□□□ -0.31
TUBGCP4-208ENST00000564079 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.14□□□□□ -0.31
TUBGCP4-208ENST00000564079 YIPF2Q9BWQ6 316 aa13.14□□□□□ -0.31
TUBGCP4-208ENST00000564079 CCL15-CCL14A0A0B4J2E2 113 aa13.14□□□□□ -0.31
TUBGCP4-208ENST00000564079 MFAP3P55082 362 aa13.14□□□□□ -0.31
TUBGCP4-208ENST00000564079 PTGDRQ13258 359 aa13.14□□□□□ -0.31
TUBGCP4-208ENST00000564079 CCL15Q16663 113 aa13.14□□□□□ -0.31
TUBGCP4-208ENST00000564079 USP44Q9H0E7 712 aa13.14□□□□□ -0.31
TUBGCP4-208ENST00000564079 AMFRQ9UKV5 643 aa13.14□□□□□ -0.31
TUBGCP4-208ENST00000564079 ADCY8P40145 1251 aa13.14□□□□□ -0.31
TUBGCP4-208ENST00000564079 ZNF131P52739 623 aa13.14□□□□□ -0.31
TUBGCP4-208ENST00000564079 DENND2CQ68D51 928 aa13.14□□□□□ -0.31
TUBGCP4-208ENST00000564079 PARK7Q99497 189 aaKnown RBP13.14□□□□□ -0.31
TUBGCP4-208ENST00000564079 PAXBP1Q9Y5B6 917 aa13.14□□□□□ -0.31
TUBGCP4-208ENST00000564079 MAP3K1Q13233 1512 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms