RNA–Protein interactions for RNA: ENST00000563716.5

DUX4-201, Transcript of double homeobox 4, humanhuman

TSL 5

Gene DUX4, Length 285 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4-201ENST00000563716 PNMA2Q9UL42 364 aa11.41□□□□□ -0.58
DUX4-201ENST00000563716 PCDHA11Q9Y5I1 949 aa11.41□□□□□ -0.58
DUX4-201ENST00000563716 MYO7AQ13402 2215 aa11.41□□□□□ -0.58
DUX4-201ENST00000563716 RAD50Q92878 1312 aa11.4□□□□□ -0.58
DUX4-201ENST00000563716 TRIOO75962 3097 aa11.4□□□□□ -0.58
DUX4-201ENST00000563716 RFXAPO00287 272 aa11.4□□□□□ -0.58
DUX4-201ENST00000563716 CA3P07451 260 aa11.4□□□□□ -0.58
DUX4-201ENST00000563716 PARP1P09874 1014 aaKnown RBP11.4□□□□□ -0.58
DUX4-201ENST00000563716 IQCF3P0C7M6 154 aa11.4□□□□□ -0.58
DUX4-201ENST00000563716 SUPT20HL2P0C7V6 817 aa11.4□□□□□ -0.58
DUX4-201ENST00000563716 ZNF286BP0CG31 522 aa11.4□□□□□ -0.58
DUX4-201ENST00000563716 HSD17B4P51659 736 aa11.4□□□□□ -0.58
DUX4-201ENST00000563716 CHMP4BP1P59074 171 aa11.4□□□□□ -0.58
DUX4-201ENST00000563716 GHRHRQ02643 423 aa11.4□□□□□ -0.58
DUX4-201ENST00000563716 HIC1Q14526 733 aa11.4□□□□□ -0.58
DUX4-201ENST00000563716 KRT40Q6A162 431 aa11.4□□□□□ -0.58
DUX4-201ENST00000563716 CHST3Q7LGC8 479 aa11.4□□□□□ -0.58
DUX4-201ENST00000563716 TMCO2Q7Z6W1 182 aaPredicted RBP11.4□□□□□ -0.58
DUX4-201ENST00000563716 FBXO11Q86XK2 927 aa11.4□□□□□ -0.58
DUX4-201ENST00000563716 RPUSD2Q8IZ73 545 aaKnown RBP11.4□□□□□ -0.58
DUX4-201ENST00000563716 SLC28A3Q9HAS3 691 aa11.4□□□□□ -0.58
DUX4-201ENST00000563716 VAT1LQ9HCJ6 419 aa11.4□□□□□ -0.58
DUX4-201ENST00000563716 PXMP2Q9NR77 195 aa11.4□□□□□ -0.58
DUX4-201ENST00000563716 GH1P01241 217 aa11.39□□□□□ -0.59
DUX4-201ENST00000563716 PFKMP08237 780 aa11.39□□□□□ -0.59
DUX4-201ENST00000563716 HOXD8P13378 290 aaPredicted RBP11.39□□□□□ -0.59
DUX4-201ENST00000563716 IGFBP4P22692 258 aa11.39□□□□□ -0.59
DUX4-201ENST00000563716 HOXA13P31271 388 aaPredicted RBP11.39□□□□□ -0.59
DUX4-201ENST00000563716 PTH1RQ03431 593 aa11.39□□□□□ -0.59
DUX4-201ENST00000563716 PTPN11Q06124 597 aaPredicted RBP11.39□□□□□ -0.59
DUX4-201ENST00000563716 COL9A3Q14050 684 aaPredicted RBP11.39□□□□□ -0.59
DUX4-201ENST00000563716 PTGISQ16647 500 aa11.39□□□□□ -0.59
DUX4-201ENST00000563716 IMMTQ16891 758 aaKnown RBP11.39□□□□□ -0.59
DUX4-201ENST00000563716 TTC22Q5TAA0 569 aa11.39□□□□□ -0.59
DUX4-201ENST00000563716 TRAF7Q6Q0C0 670 aa11.39□□□□□ -0.59
DUX4-201ENST00000563716 STOX1Q6ZVD7 989 aa11.39□□□□□ -0.59
DUX4-201ENST00000563716 NSUN6Q8TEA1 469 aaKnown RBP11.39□□□□□ -0.59
DUX4-201ENST00000563716 GPKOWQ92917 476 aaPredicted RBP eCLIP11.39□□□□□ -0.59
DUX4-201ENST00000563716 CERS4Q9HA82 394 aa11.39□□□□□ -0.59
DUX4-201ENST00000563716 GPHNQ9NQX3 736 aaPredicted RBP11.39□□□□□ -0.59
DUX4-201ENST00000563716 THEGQ9P2T0 379 aa11.39□□□□□ -0.59
DUX4-201ENST00000563716 DDX41Q9UJV9 622 aaKnown RBP11.39□□□□□ -0.59
DUX4-201ENST00000563716 LCHNA4D1U4 455 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 PALM3A6NDB9 673 aaPredicted RBP11.38□□□□□ -0.59
DUX4-201ENST00000563716 HIP1O00291 1037 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 CYTH3O43739 400 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 DHX16O60231 1041 aaKnown RBP11.38□□□□□ -0.59
DUX4-201ENST00000563716 SORBS3O60504 671 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 KPNA6O60684 536 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 F2P00734 622 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 CFBP00751 764 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 NR3C2P08235 984 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 CYP21A2P08686 494 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 RFC2P35250 354 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 NT5C2P49902 561 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 SP2Q02086 613 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 TAP1Q03518 808 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 MBTPS1Q14703 1052 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 TRIM71Q2Q1W2 868 aaKnown RBP11.38□□□□□ -0.59
DUX4-201ENST00000563716 BRDTQ58F21 947 aaPredicted RBP11.38□□□□□ -0.59
DUX4-201ENST00000563716 CCDC178Q5BJE1 867 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 IFIT1BQ5T764 474 aaKnown RBP11.38□□□□□ -0.59
DUX4-201ENST00000563716 SESTD1Q86VW0 696 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 EMID1Q96A84 441 aaPredicted RBP11.38□□□□□ -0.59
DUX4-201ENST00000563716 ZFP91Q96JP5 570 aaPredicted RBP11.38□□□□□ -0.59
DUX4-201ENST00000563716 MPHOSPH6Q99547 160 aaKnown RBP11.38□□□□□ -0.59
DUX4-201ENST00000563716 PDCD2LQ9BRP1 358 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 UBAC1Q9BSL1 405 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 KRT23Q9C075 422 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 BCAS3Q9H6U6 928 aa11.38□□□□□ -0.59
DUX4-201ENST00000563716 MRPL11Q9Y3B7 192 aaKnown RBP11.38□□□□□ -0.59
DUX4-201ENST00000563716 COL4A6Q14031 1691 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 KLRF2D3W0D1 207 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 HAS3O00219 553 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 NBNO60934 754 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 UBA1P22314 1058 aaKnown RBP11.37□□□□□ -0.59
DUX4-201ENST00000563716 PSEN2P49810 448 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 ANTXR2P58335 489 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 WDR5P61964 334 aaKnown RBP11.37□□□□□ -0.59
DUX4-201ENST00000563716 DEFB103AP81534 67 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 ZNF200P98182 395 aaPredicted RBP11.37□□□□□ -0.59
DUX4-201ENST00000563716 TFF2Q03403 129 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 RBL2Q08999 1139 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 GRM4Q14833 912 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 STXBP2Q15833 593 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 TMEM67Q5HYA8 995 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 ARHGEF16Q5VV41 709 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 MCF2L2Q86YR7 1114 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 HERC6Q8IVU3 1022 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 MICALL1Q8N3F8 863 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 AFAP1L1Q8TED9 768 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 NECAB3Q96P71 396 aaPredicted RBP11.37□□□□□ -0.59
DUX4-201ENST00000563716 ASB2Q96Q27 587 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 PIGSQ96S52 555 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 IWS1Q96ST2 819 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 SLC9A7Q96T83 725 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 AMNQ9BXJ7 453 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 MAF1Q9H063 256 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 CNNM2Q9H8M5 875 aa11.37□□□□□ -0.59
DUX4-201ENST00000563716 HDAC6Q9UBN7 1215 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms