RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 TMEM169Q96HH4 297 aa5.84□□□□□ -1.47
GDE1-202ENST00000563645 ARHGEF4Q9NR80 690 aa5.84□□□□□ -1.47
GDE1-202ENST00000563645 NPFFR2Q9Y5X5 522 aa5.84□□□□□ -1.47
GDE1-202ENST00000563645 H7BY64 318 aa5.83□□□□□ -1.48
GDE1-202ENST00000563645 DLX3O60479 287 aa5.83□□□□□ -1.48
GDE1-202ENST00000563645 TRIM13O60858 407 aa5.83□□□□□ -1.48
GDE1-202ENST00000563645 PLA2G1BP04054 148 aaKnown RBP5.83□□□□□ -1.48
GDE1-202ENST00000563645 INHBBP09529 407 aa5.83□□□□□ -1.48
GDE1-202ENST00000563645 FGFR1P11362 822 aa5.83□□□□□ -1.48
GDE1-202ENST00000563645 TTLL10Q6ZVT0 673 aa5.83□□□□□ -1.48
GDE1-202ENST00000563645 CEP68Q76N32 757 aa5.83□□□□□ -1.48
GDE1-202ENST00000563645 ARMC5Q96C12 935 aa5.83□□□□□ -1.48
GDE1-202ENST00000563645 PPP1R1BQ9UD71 204 aaPredicted RBP5.83□□□□□ -1.48
GDE1-202ENST00000563645 RAPGEFL1Q9UHV5 662 aa5.83□□□□□ -1.48
GDE1-202ENST00000563645 COA3Q9Y2R0 106 aaPredicted RBP5.83□□□□□ -1.48
GDE1-202ENST00000563645 PCDHA2Q9Y5H9 948 aa5.83□□□□□ -1.48
GDE1-202ENST00000563645 PMF1-BGLAPU3KQ54 211 aa5.83□□□□□ -1.48
GDE1-202ENST00000563645 SGSM2O43147 1006 aa5.82□□□□□ -1.48
GDE1-202ENST00000563645 BMP7P18075 431 aa5.82□□□□□ -1.48
GDE1-202ENST00000563645 HTRA3P83110 453 aa5.82□□□□□ -1.48
GDE1-202ENST00000563645 CACNB2Q08289 660 aaPredicted RBP5.82□□□□□ -1.48
GDE1-202ENST00000563645 LSAMPQ13449 338 aa5.82□□□□□ -1.48
GDE1-202ENST00000563645 USP53Q70EK8 1073 aa5.82□□□□□ -1.48
GDE1-202ENST00000563645 LINC01356Q8N9X3 169 aa5.82□□□□□ -1.48
GDE1-202ENST00000563645 KCNC2Q96PR1 638 aa5.82□□□□□ -1.48
GDE1-202ENST00000563645 HIRIP3Q9BW71 556 aaPredicted RBP5.82□□□□□ -1.48
GDE1-202ENST00000563645 GPR27Q9NS67 375 aa5.82□□□□□ -1.48
GDE1-202ENST00000563645 TRAV20A0A0B4J274 112 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 PDPK1O15530 556 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 PRODHO43272 600 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 EIF5BO60841 1220 aaKnown RBP5.81□□□□□ -1.48
GDE1-202ENST00000563645 PABPC1P11940 636 aaKnown RBP5.81□□□□□ -1.48
GDE1-202ENST00000563645 GTF2F1P35269 517 aaKnown RBP eCLIP5.81□□□□□ -1.48
GDE1-202ENST00000563645 RASGRF1Q13972 1273 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 CHRNA2Q15822 529 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 VMACQ2NL98 169 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 VWA3BQ502W6 1294 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 LCE4AQ5TA78 99 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 RSPO2Q6UXX9 243 aaPredicted RBP5.81□□□□□ -1.48
GDE1-202ENST00000563645 ETV3LQ6ZN32 361 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 MIB1Q86YT6 1006 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 MARCH10Q8NA82 808 aaPredicted RBP5.81□□□□□ -1.48
GDE1-202ENST00000563645 SMARCC2Q8TAQ2 1214 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 FNIP1Q8TF40 1166 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 OSBP2Q969R2 916 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 CHAMP1Q96JM3 812 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 PHF20Q9BVI0 1012 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 ZCCHC4Q9H5U6 513 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 PARD6AQ9NPB6 346 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 CLDND1Q9NY35 253 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 SIRPGQ9P1W8 387 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 PALD1Q9ULE6 856 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 ZNF652Q9Y2D9 606 aa5.81□□□□□ -1.48
GDE1-202ENST00000563645 FFAR3O14843 346 aa5.8□□□□□ -1.48
GDE1-202ENST00000563645 C8BP07358 591 aa5.8□□□□□ -1.48
GDE1-202ENST00000563645 SERINC3Q13530 473 aa5.8□□□□□ -1.48
GDE1-202ENST00000563645 MTERF2Q49AM1 385 aa5.8□□□□□ -1.48
GDE1-202ENST00000563645 EMC4Q5J8M3 183 aa5.8□□□□□ -1.48
GDE1-202ENST00000563645 NSMFQ6X4W1 530 aa5.8□□□□□ -1.48
GDE1-202ENST00000563645 SPATC1Q76KD6 591 aa5.8□□□□□ -1.48
GDE1-202ENST00000563645 SP8Q8IXZ3 490 aa5.8□□□□□ -1.48
GDE1-202ENST00000563645 TP53I13Q8NBR0 393 aaPredicted RBP5.8□□□□□ -1.48
GDE1-202ENST00000563645 SPATA9Q9BWV2 254 aa5.8□□□□□ -1.48
GDE1-202ENST00000563645 CCDC113Q9H0I3 377 aa5.8□□□□□ -1.48
GDE1-202ENST00000563645 EPB41L1Q9H4G0 881 aa5.8□□□□□ -1.48
GDE1-202ENST00000563645 CCDC85CA6NKD9 419 aa5.79□□□□□ -1.48
GDE1-202ENST00000563645 MSCO60682 206 aa5.79□□□□□ -1.48
GDE1-202ENST00000563645 CYP2C8P10632 490 aa5.79□□□□□ -1.48
GDE1-202ENST00000563645 IFRD2Q12894 506 aaPredicted RBP5.79□□□□□ -1.48
GDE1-202ENST00000563645 NTRK3Q16288 839 aa5.79□□□□□ -1.48
GDE1-202ENST00000563645 YOD1Q5VVQ6 348 aaPredicted RBP5.79□□□□□ -1.48
GDE1-202ENST00000563645 MILR1Q7Z6M3 343 aa5.79□□□□□ -1.48
GDE1-202ENST00000563645 SAPCD2Q86UD0 394 aa5.79□□□□□ -1.48
GDE1-202ENST00000563645 FAM126BQ8IXS8 530 aa5.79□□□□□ -1.48
GDE1-202ENST00000563645 DCAF4Q8WV16 495 aa5.79□□□□□ -1.48
GDE1-202ENST00000563645 CDIP1Q9H305 208 aa5.79□□□□□ -1.48
GDE1-202ENST00000563645 LUC7LQ9NQ29 371 aaKnown RBP5.79□□□□□ -1.48
GDE1-202ENST00000563645 HGSO14964 777 aaPredicted RBP5.78□□□□□ -1.48
GDE1-202ENST00000563645 ADCY3O60266 1144 aa5.78□□□□□ -1.48
GDE1-202ENST00000563645 DGKIO75912 1065 aa5.78□□□□□ -1.48
GDE1-202ENST00000563645 SASH1O94885 1247 aa5.78□□□□□ -1.48
GDE1-202ENST00000563645 HOXA5P20719 270 aa5.78□□□□□ -1.48
GDE1-202ENST00000563645 DLX2Q07687 328 aaPredicted RBP5.78□□□□□ -1.48
GDE1-202ENST00000563645 SSRP1Q08945 709 aaKnown RBP5.78□□□□□ -1.48
GDE1-202ENST00000563645 SF3A1Q15459 793 aaKnown RBP5.78□□□□□ -1.48
GDE1-202ENST00000563645 STEAP3Q658P3 488 aa5.78□□□□□ -1.48
GDE1-202ENST00000563645 LIPIQ6XZB0 460 aa5.78□□□□□ -1.48
GDE1-202ENST00000563645 ZC3H18Q86VM9 953 aaKnown RBP5.78□□□□□ -1.48
GDE1-202ENST00000563645 NOX5Q96PH1 765 aa5.78□□□□□ -1.48
GDE1-202ENST00000563645 ZFYVE21Q9BQ24 234 aa5.78□□□□□ -1.48
GDE1-202ENST00000563645 PCDH18Q9HCL0 1135 aa5.78□□□□□ -1.48
GDE1-202ENST00000563645 PFDN2Q9UHV9 154 aa5.78□□□□□ -1.48
GDE1-202ENST00000563645 PCDHB4Q9Y5E5 795 aa5.78□□□□□ -1.48
GDE1-202ENST00000563645 ADAMTS20P59510 1910 aa5.78□□□□□ -1.48
GDE1-202ENST00000563645 SH3D21A4FU49 640 aa5.77□□□□□ -1.49
GDE1-202ENST00000563645 RBL2Q08999 1139 aa5.77□□□□□ -1.49
GDE1-202ENST00000563645 RASA3Q14644 834 aa5.77□□□□□ -1.49
GDE1-202ENST00000563645 KIZQ2M2Z5 673 aa5.77□□□□□ -1.49
GDE1-202ENST00000563645 LCE1DQ5T752 114 aa5.77□□□□□ -1.49
GDE1-202ENST00000563645 STYK1Q6J9G0 422 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms