RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 LSM14BQ9BX40 385 aaKnown RBP13.07□□□□□ -0.32
ABCA3-203ENST00000563623 POTEMA6NI47 508 aa13.06□□□□□ -0.32
ABCA3-203ENST00000563623 RASSF10A6NK89 507 aa13.06□□□□□ -0.32
ABCA3-203ENST00000563623 GNA11P29992 359 aa13.06□□□□□ -0.32
ABCA3-203ENST00000563623 CALCRLQ16602 461 aa13.06□□□□□ -0.32
ABCA3-203ENST00000563623 MAN2A1Q16706 1144 aa13.06□□□□□ -0.32
ABCA3-203ENST00000563623 INTS5Q6P9B9 1019 aaKnown RBP13.06□□□□□ -0.32
ABCA3-203ENST00000563623 SH3RF3Q8TEJ3 882 aaPredicted RBP13.06□□□□□ -0.32
ABCA3-203ENST00000563623 LRRC15Q8TF66 581 aa13.06□□□□□ -0.32
ABCA3-203ENST00000563623 TMEM47Q9BQJ4 181 aa13.06□□□□□ -0.32
ABCA3-203ENST00000563623 PKD1L3Q7Z443 1732 aa13.06□□□□□ -0.32
ABCA3-203ENST00000563623 FRMPD2Q68DX3 1309 aaPredicted RBP13.06□□□□□ -0.32
ABCA3-203ENST00000563623 KRT79Q5XKE5 535 aa13.06□□□□□ -0.32
ABCA3-203ENST00000563623 NLRP3Q96P20 1036 aa13.06□□□□□ -0.32
ABCA3-203ENST00000563623 PIGSQ96S52 555 aa13.06□□□□□ -0.32
ABCA3-203ENST00000563623 IL17RBQ9NRM6 502 aa13.06□□□□□ -0.32
ABCA3-203ENST00000563623 ALS2Q96Q42 1657 aa13.06□□□□□ -0.32
ABCA3-203ENST00000563623 GUCY1A3Q02108 690 aa13.06□□□□□ -0.32
ABCA3-203ENST00000563623 SLC9C1Q4G0N8 1177 aa13.06□□□□□ -0.32
ABCA3-203ENST00000563623 MIIPQ5JXC2 388 aa13.06□□□□□ -0.32
ABCA3-203ENST00000563623 NBPF5PQ86XG9 351 aaPredicted RBP13.06□□□□□ -0.32
ABCA3-203ENST00000563623 REXO1Q8N1G1 1221 aaKnown RBP13.06□□□□□ -0.32
ABCA3-203ENST00000563623 AENQ8WTP8 325 aaKnown RBP13.06□□□□□ -0.32
ABCA3-203ENST00000563623 COA7Q96BR5 231 aa13.06□□□□□ -0.32
ABCA3-203ENST00000563623 GPR101Q96P66 508 aaPredicted RBP13.06□□□□□ -0.32
ABCA3-203ENST00000563623 ZIM3Q96PE6 472 aa13.06□□□□□ -0.32
ABCA3-203ENST00000563623 CHD4Q14839 1912 aa13.06□□□□□ -0.32
ABCA3-203ENST00000563623 MYMKA6NI61 221 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 STXBP3O00186 592 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 CYTH3O43739 400 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 APBA1Q02410 837 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 CEP85LQ5SZL2 805 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 SFMBT2Q5VUG0 894 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 MMGT1Q8N4V1 131 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 KIAA0895Q8NCT3 520 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 TBC1D5Q92609 795 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 GJA10Q969M2 543 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 GPCPD1Q9NPB8 672 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 PPANQ9NQ55 473 aaKnown RBP13.05□□□□□ -0.32
ABCA3-203ENST00000563623 BMP2KQ9NSY1 1161 aaPredicted RBP13.05□□□□□ -0.32
ABCA3-203ENST00000563623 BSDC1Q9NW68 430 aaPredicted RBP13.05□□□□□ -0.32
ABCA3-203ENST00000563623 BARHL2Q9NY43 387 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 PLAGL2Q9UPG8 496 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 GLI3P10071 1580 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 PALMO75781 387 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 MYL1P05976 194 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 PAK2Q13177 524 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 DDB1Q16531 1140 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 KIAA0753Q2KHM9 967 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 DGKHQ86XP1 1220 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 MTMR8Q96EF0 704 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 ERGIC2Q96RQ1 377 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 COL18A1P39060 1754 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 EIF3HO15372 352 aaKnown RBP eCLIP13.05□□□□□ -0.32
ABCA3-203ENST00000563623 BAG3O95817 575 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 ITPK1Q13572 414 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 GRM4Q14833 912 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 TCERG1LQ5VWI1 586 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 HAUS3Q68CZ6 603 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 CCDC91Q7Z6B0 441 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 TXNRD3Q86VQ6 643 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 LARP4BQ92615 738 aaKnown RBP13.05□□□□□ -0.32
ABCA3-203ENST00000563623 CUEDC2Q9H467 287 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 SH3GLB2Q9NR46 395 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 MAD2L2Q9UI95 211 aa13.05□□□□□ -0.32
ABCA3-203ENST00000563623 GLIS3Q8NEA6 775 aa13.04□□□□□ -0.32
ABCA3-203ENST00000563623 EYA3Q99504 573 aa13.04□□□□□ -0.32
ABCA3-203ENST00000563623 RAB34Q9BZG1 259 aa13.04□□□□□ -0.32
ABCA3-203ENST00000563623 TTYH3Q9C0H2 523 aa13.04□□□□□ -0.32
ABCA3-203ENST00000563623 ADAMTS1Q9UHI8 967 aa13.04□□□□□ -0.32
ABCA3-203ENST00000563623 CEP104O60308 925 aa13.04□□□□□ -0.32
ABCA3-203ENST00000563623 FAM153BP0C7A2 387 aa13.04□□□□□ -0.32
ABCA3-203ENST00000563623 KLHL30Q0D2K2 578 aa13.04□□□□□ -0.32
ABCA3-203ENST00000563623 FAM153CQ494X1 144 aa13.04□□□□□ -0.32
ABCA3-203ENST00000563623 SPTY2D1Q68D10 685 aaPredicted RBP13.04□□□□□ -0.32
ABCA3-203ENST00000563623 EMBQ6PCB8 327 aa13.04□□□□□ -0.32
ABCA3-203ENST00000563623 GBP6Q6ZN66 633 aa13.04□□□□□ -0.32
ABCA3-203ENST00000563623 DNAAF5Q86Y56 855 aa13.04□□□□□ -0.32
ABCA3-203ENST00000563623 AK8Q96MA6 479 aa13.04□□□□□ -0.32
ABCA3-203ENST00000563623 SPAG5Q96R06 1193 aa13.04□□□□□ -0.32
ABCA3-203ENST00000563623 GOLPH3Q9H4A6 298 aa13.04□□□□□ -0.32
ABCA3-203ENST00000563623 FAM153AQ9UHL3 310 aa13.04□□□□□ -0.32
ABCA3-203ENST00000563623 SALL4Q9UJQ4 1053 aa13.04□□□□□ -0.32
ABCA3-203ENST00000563623 ZBTB12Q9Y330 459 aaPredicted RBP13.04□□□□□ -0.32
ABCA3-203ENST00000563623 E7EVH7 732 aa13.03□□□□□ -0.32
ABCA3-203ENST00000563623 KCNK3O14649 394 aa13.03□□□□□ -0.32
ABCA3-203ENST00000563623 GLI1P08151 1106 aa13.03□□□□□ -0.32
ABCA3-203ENST00000563623 LAD1O00515 517 aa13.03□□□□□ -0.32
ABCA3-203ENST00000563623 TDP2O95551 362 aa13.03□□□□□ -0.32
ABCA3-203ENST00000563623 GUCY2CP25092 1073 aa13.03□□□□□ -0.32
ABCA3-203ENST00000563623 PPP1R2P41236 205 aa13.03□□□□□ -0.32
ABCA3-203ENST00000563623 FAM133AQ8N9E0 248 aa13.03□□□□□ -0.32
ABCA3-203ENST00000563623 C7orf25Q9BPX7 421 aa13.03□□□□□ -0.32
ABCA3-203ENST00000563623 LRP6O75581 1613 aa13.03□□□□□ -0.32
ABCA3-203ENST00000563623 SEC24CP53992 1094 aa13.03□□□□□ -0.32
ABCA3-203ENST00000563623 PPP2R5AQ15172 486 aa13.03□□□□□ -0.32
ABCA3-203ENST00000563623 TTMPQ5BVD1 217 aa13.03□□□□□ -0.32
ABCA3-203ENST00000563623 C12orf60Q5U649 245 aa13.03□□□□□ -0.32
ABCA3-203ENST00000563623 ALS2CLQ60I27 953 aa13.03□□□□□ -0.32
ABCA3-203ENST00000563623 MMS22LQ6ZRQ5 1243 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms