RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 DIRC2Q96SL1 478 aa5.87□□□□□ -1.47
CDR2-203ENST00000563573 ADAMTS10Q9H324 1103 aa5.87□□□□□ -1.47
CDR2-203ENST00000563573 SLC52A2Q9HAB3 445 aa5.87□□□□□ -1.47
CDR2-203ENST00000563573 MIS18AQ9NYP9 233 aa5.87□□□□□ -1.47
CDR2-203ENST00000563573 VTI1BQ9UEU0 232 aa5.87□□□□□ -1.47
CDR2-203ENST00000563573 CORINQ9Y5Q5 1042 aa5.87□□□□□ -1.47
CDR2-203ENST00000563573 FANCIQ9NVI1 1328 aa5.87□□□□□ -1.47
CDR2-203ENST00000563573 LRP6O75581 1613 aa5.87□□□□□ -1.47
CDR2-203ENST00000563573 CACNA1FO60840 1977 aa5.87□□□□□ -1.47
CDR2-203ENST00000563573 SIPA1L3O60292 1781 aaPredicted RBP5.86□□□□□ -1.47
CDR2-203ENST00000563573 CEMIPQ8WUJ3 1361 aa5.86□□□□□ -1.47
CDR2-203ENST00000563573 SOS1Q07889 1333 aaPredicted RBP5.86□□□□□ -1.47
CDR2-203ENST00000563573 FITM1A5D6W6 292 aa5.86□□□□□ -1.47
CDR2-203ENST00000563573 UPK3BL1B0FP48 263 aa5.86□□□□□ -1.47
CDR2-203ENST00000563573 UPK3BL2E5RIL1 263 aa5.86□□□□□ -1.47
CDR2-203ENST00000563573 ELL2O00472 640 aaPredicted RBP5.86□□□□□ -1.47
CDR2-203ENST00000563573 CANXP27824 592 aaKnown RBP5.86□□□□□ -1.47
CDR2-203ENST00000563573 MFAP1P55081 439 aaKnown RBP5.86□□□□□ -1.47
CDR2-203ENST00000563573 CHRNEQ04844 493 aa5.86□□□□□ -1.47
CDR2-203ENST00000563573 ALDH1L2Q3SY69 923 aa5.86□□□□□ -1.47
CDR2-203ENST00000563573 SNAP47Q5SQN1 464 aa5.86□□□□□ -1.47
CDR2-203ENST00000563573 SPOCD1Q6ZMY3 1216 aa5.86□□□□□ -1.47
CDR2-203ENST00000563573 ENOX1Q8TC92 643 aaKnown RBP5.86□□□□□ -1.47
CDR2-203ENST00000563573 RHOVQ96L33 236 aa5.86□□□□□ -1.47
CDR2-203ENST00000563573 ASCC2Q9H1I8 757 aaPredicted RBP5.86□□□□□ -1.47
CDR2-203ENST00000563573 TMOD3Q9NYL9 352 aa5.86□□□□□ -1.47
CDR2-203ENST00000563573 REV1Q9UBZ9 1251 aa5.86□□□□□ -1.47
CDR2-203ENST00000563573 ITGB4P16144 1822 aa5.85□□□□□ -1.47
CDR2-203ENST00000563573 SHANK3Q9BYB0 1731 aa5.85□□□□□ -1.47
CDR2-203ENST00000563573 DISP2A7MBM2 1401 aa5.85□□□□□ -1.47
CDR2-203ENST00000563573 RBM47A0AV96 593 aaKnown RBP5.85□□□□□ -1.47
CDR2-203ENST00000563573 IPO8O15397 1037 aaKnown RBP5.85□□□□□ -1.47
CDR2-203ENST00000563573 VAMP4O75379 141 aa5.85□□□□□ -1.47
CDR2-203ENST00000563573 HTR3BO95264 441 aa5.85□□□□□ -1.47
CDR2-203ENST00000563573 CFPP27918 469 aa5.85□□□□□ -1.47
CDR2-203ENST00000563573 RARSP54136 660 aaKnown RBP5.85□□□□□ -1.47
CDR2-203ENST00000563573 RBM6P78332 1123 aaKnown RBP5.85□□□□□ -1.47
CDR2-203ENST00000563573 DUSP4Q13115 394 aa5.85□□□□□ -1.47
CDR2-203ENST00000563573 SNX17Q15036 470 aa5.85□□□□□ -1.47
CDR2-203ENST00000563573 NR0B2Q15466 257 aa5.85□□□□□ -1.47
CDR2-203ENST00000563573 CLEC16AQ2KHT3 1053 aa5.85□□□□□ -1.47
CDR2-203ENST00000563573 CCDC30Q5VVM6 783 aa5.85□□□□□ -1.47
CDR2-203ENST00000563573 PHACTR4Q8IZ21 702 aa5.85□□□□□ -1.47
CDR2-203ENST00000563573 C8orf58Q8NAV2 365 aa5.85□□□□□ -1.47
CDR2-203ENST00000563573 KREMEN1Q96MU8 473 aa5.85□□□□□ -1.47
CDR2-203ENST00000563573 FAM161BQ96MY7 647 aa5.85□□□□□ -1.47
CDR2-203ENST00000563573 STK31Q9BXU1 1019 aa5.85□□□□□ -1.47
CDR2-203ENST00000563573 CWC22Q9HCG8 908 aaKnown RBP5.85□□□□□ -1.47
CDR2-203ENST00000563573 KDM3BQ7LBC6 1761 aa5.85□□□□□ -1.47
CDR2-203ENST00000563573 ADAMTS7Q9UKP4 1686 aa5.85□□□□□ -1.47
CDR2-203ENST00000563573 ATRNO75882 1429 aa5.84□□□□□ -1.47
CDR2-203ENST00000563573 BCAR3O75815 825 aa5.84□□□□□ -1.47
CDR2-203ENST00000563573 C1QTNF9P0C862 333 aa5.84□□□□□ -1.47
CDR2-203ENST00000563573 MED14OSP0DP75 135 aa5.84□□□□□ -1.47
CDR2-203ENST00000563573 EIF4A1P60842 406 aaKnown RBP5.84□□□□□ -1.47
CDR2-203ENST00000563573 RNF4P78317 190 aa5.84□□□□□ -1.47
CDR2-203ENST00000563573 ERICH6BQ5W0A0 696 aa5.84□□□□□ -1.47
CDR2-203ENST00000563573 ZNF790Q6PG37 636 aa5.84□□□□□ -1.47
CDR2-203ENST00000563573 REC114Q7Z4M0 266 aa5.84□□□□□ -1.47
CDR2-203ENST00000563573 IRF2BP1Q8IU81 584 aa5.84□□□□□ -1.47
CDR2-203ENST00000563573 CILP2Q8IUL8 1156 aa5.84□□□□□ -1.47
CDR2-203ENST00000563573 LRRC56Q8IYG6 542 aaPredicted RBP5.84□□□□□ -1.47
CDR2-203ENST00000563573 MARCH10Q8NA82 808 aaPredicted RBP5.84□□□□□ -1.47
CDR2-203ENST00000563573 GOLM1Q8NBJ4 401 aa5.84□□□□□ -1.47
CDR2-203ENST00000563573 FRAT1Q92837 279 aaPredicted RBP5.84□□□□□ -1.47
CDR2-203ENST00000563573 TEX13AQ9BXU3 409 aaPredicted RBP5.84□□□□□ -1.47
CDR2-203ENST00000563573 SLC6A17Q9H1V8 727 aa5.84□□□□□ -1.47
CDR2-203ENST00000563573 SMC4Q9NTJ3 1288 aa5.84□□□□□ -1.47
CDR2-203ENST00000563573 KLHL3Q9UH77 587 aa5.84□□□□□ -1.47
CDR2-203ENST00000563573 LRRC37A3O60309 1634 aa5.84□□□□□ -1.47
CDR2-203ENST00000563573 TNS2Q63HR2 1409 aa5.83□□□□□ -1.48
CDR2-203ENST00000563573 TCAF2A6NFQ2 919 aa5.83□□□□□ -1.48
CDR2-203ENST00000563573 CHURC1-FNTBB4DL54 471 aa5.83□□□□□ -1.48
CDR2-203ENST00000563573 HOXB7P09629 217 aa5.83□□□□□ -1.48
CDR2-203ENST00000563573 SNRPA1P09661 255 aaKnown RBP5.83□□□□□ -1.48
CDR2-203ENST00000563573 ZGLP1P0C6A0 271 aa5.83□□□□□ -1.48
CDR2-203ENST00000563573 EIF2S2P20042 333 aaKnown RBP5.83□□□□□ -1.48
CDR2-203ENST00000563573 GLDCP23378 1020 aa5.83□□□□□ -1.48
CDR2-203ENST00000563573 HMGB2P26583 209 aaKnown RBP5.83□□□□□ -1.48
CDR2-203ENST00000563573 GBP1P32455 592 aa5.83□□□□□ -1.48
CDR2-203ENST00000563573 RRP1P56182 461 aaKnown RBP5.83□□□□□ -1.48
CDR2-203ENST00000563573 ERVFC1P60507 584 aa5.83□□□□□ -1.48
CDR2-203ENST00000563573 CWF19L2Q2TBE0 894 aaKnown RBP5.83□□□□□ -1.48
CDR2-203ENST00000563573 FAM196AQ6ZSG2 479 aa5.83□□□□□ -1.48
CDR2-203ENST00000563573 TSPYL6Q8N831 410 aa5.83□□□□□ -1.48
CDR2-203ENST00000563573 ANKS4BQ8N8V4 417 aa5.83□□□□□ -1.48
CDR2-203ENST00000563573 KCNN1Q92952 543 aa5.83□□□□□ -1.48
CDR2-203ENST00000563573 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.83□□□□□ -1.48
CDR2-203ENST00000563573 RGS17Q9UGC6 210 aaPredicted RBP5.83□□□□□ -1.48
CDR2-203ENST00000563573 PCDHA11Q9Y5I1 949 aa5.83□□□□□ -1.48
CDR2-203ENST00000563573 KDM6AO15550 1401 aaPredicted RBP5.82□□□□□ -1.48
CDR2-203ENST00000563573 KIF16BQ96L93 1317 aa5.82□□□□□ -1.48
CDR2-203ENST00000563573 GLI3P10071 1580 aa5.82□□□□□ -1.48
CDR2-203ENST00000563573 WASH4PA8MWX3 477 aa5.82□□□□□ -1.48
CDR2-203ENST00000563573 MINDY4BA8MYZ0 360 aa5.82□□□□□ -1.48
CDR2-203ENST00000563573 RGS13O14921 159 aa5.82□□□□□ -1.48
CDR2-203ENST00000563573 RAD51AP2Q09MP3 1159 aa5.82□□□□□ -1.48
CDR2-203ENST00000563573 SLC39A6Q13433 755 aa5.82□□□□□ -1.48
CDR2-203ENST00000563573 ZKSCAN2Q63HK3 967 aa5.82□□□□□ -1.48
CDR2-203ENST00000563573 AMIGO3Q86WK7 504 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms