RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 VWA3AA6NCI4 1184 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 H3BQF6 201 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 KRT38O76015 456 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 SCG2P13521 617 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 MCM7P33993 719 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 ADARP55265 1226 aaKnown RBP6.78□□□□□ -1.32
CLK3-212ENST00000563418 MDM2Q00987 491 aaPredicted RBP6.78□□□□□ -1.32
CLK3-212ENST00000563418 ASPHQ12797 758 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 MMEL1Q495T6 779 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 DNAL1Q4LDG9 190 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 TMCO5AQ8N6Q1 288 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 CCDC89Q8N998 374 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 PROCA1Q8NCQ7 364 aaPredicted RBP6.78□□□□□ -1.32
CLK3-212ENST00000563418 PRPF31Q8WWY3 499 aaKnown RBP6.78□□□□□ -1.32
CLK3-212ENST00000563418 LONP1P36776 959 aaKnown RBP6.78□□□□□ -1.32
CLK3-212ENST00000563418 ZBED6P86452 979 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 CAV1Q03135 178 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 KLHL30Q0D2K2 578 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 SYCP2LQ5T4T6 812 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 GPR101Q96P66 508 aaPredicted RBP6.78□□□□□ -1.32
CLK3-212ENST00000563418 CABP2Q9NPB3 220 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 ZNF446Q9NWS9 450 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 SENP1Q9P0U3 644 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 RSPH10B2B2RC85 870 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 IGF2BP3O00425 579 aaKnown RBP eCLIP6.78□□□□□ -1.32
CLK3-212ENST00000563418 RSPH10BP0C881 870 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 GIMAP4Q9NUV9 329 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 ZMYND8Q9ULU4 1186 aaPredicted RBP6.78□□□□□ -1.32
CLK3-212ENST00000563418 AREL1O15033 823 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 SUPT3HO75486 399 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 PRPF6O94906 941 aaKnown RBP6.78□□□□□ -1.32
CLK3-212ENST00000563418 TBCCQ15814 346 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 CDC37Q16543 378 aaPredicted RBP6.78□□□□□ -1.32
CLK3-212ENST00000563418 GSTA3Q16772 222 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 TMEM132AQ24JP5 1023 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 NUDCD3Q8IVD9 361 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 USP28Q96RU2 1077 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 PSMB7Q99436 277 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 FHDC1Q9C0D6 1143 aaPredicted RBP6.78□□□□□ -1.32
CLK3-212ENST00000563418 SMIM31A0A1B0GVY4 71 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 GIPC1O14908 333 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 DMPKQ09013 629 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 ARID5BQ14865 1188 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 ERMNQ8TAM6 284 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 ZFAND2BQ8WV99 257 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 TGS1Q96RS0 853 aaKnown RBP6.78□□□□□ -1.32
CLK3-212ENST00000563418 SLITRK6Q9H5Y7 841 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 CAAP1Q9H8G2 361 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 ABHD10Q9NUJ1 306 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 EURLQ9NYK6 297 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 RWDD2AQ9UIY3 292 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 CLASP2O75122 1294 aaKnown RBP6.78□□□□□ -1.32
CLK3-212ENST00000563418 ATP6V1G1O75348 118 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 WASHC2DQ5SRD0 308 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 C1orf146Q5VVC0 180 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 LONP2Q86WA8 852 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 SLC52A1Q9NWF4 448 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 STAP2Q9UGK3 403 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 GRIN2BQ13224 1484 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 DEXIO95424 95 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 PYGBP11216 843 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 GSTT1P30711 240 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 UBE2Q1Q7Z7E8 422 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 RASSF3Q86WH2 238 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 NGDNQ8NEJ9 315 aaKnown RBP6.78□□□□□ -1.32
CLK3-212ENST00000563418 ABHD8Q96I13 439 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 TRPA1O75762 1119 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 IFIT1P09914 478 aaKnown RBP6.78□□□□□ -1.32
CLK3-212ENST00000563418 KRT76Q01546 638 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 SLC39A14Q15043 492 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 RSPH3Q86UC2 560 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 MMGT1Q8N4V1 131 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 PPCSQ9HAB8 311 aa6.78□□□□□ -1.32
CLK3-212ENST00000563418 NPTXRO95502 500 aa6.77□□□□□ -1.32
CLK3-212ENST00000563418 PRR29P0C7W0 189 aa6.77□□□□□ -1.32
CLK3-212ENST00000563418 KRT3P12035 628 aa6.77□□□□□ -1.32
CLK3-212ENST00000563418 LBRQ14739 615 aaKnown RBP6.77□□□□□ -1.32
CLK3-212ENST00000563418 ATG16L1Q676U5 607 aa6.77□□□□□ -1.32
CLK3-212ENST00000563418 MFSD6Q6ZSS7 791 aa6.77□□□□□ -1.32
CLK3-212ENST00000563418 CALML6Q8TD86 181 aa6.77□□□□□ -1.32
CLK3-212ENST00000563418 TRIM15Q9C019 465 aa6.77□□□□□ -1.32
CLK3-212ENST00000563418 WFS1O76024 890 aa6.77□□□□□ -1.33
CLK3-212ENST00000563418 ECE1P42892 770 aa6.77□□□□□ -1.33
CLK3-212ENST00000563418 PIGOQ8TEQ8 1089 aa6.77□□□□□ -1.33
CLK3-212ENST00000563418 XPO6Q96QU8 1125 aaKnown RBP6.77□□□□□ -1.33
CLK3-212ENST00000563418 PTPRKQ15262 1439 aa6.77□□□□□ -1.33
CLK3-212ENST00000563418 GNAT3A8MTJ3 354 aa6.77□□□□□ -1.33
CLK3-212ENST00000563418 LSM1O15116 133 aaKnown RBP6.77□□□□□ -1.33
CLK3-212ENST00000563418 SPOPO43791 374 aa6.77□□□□□ -1.33
CLK3-212ENST00000563418 HAUS5O94927 633 aa6.77□□□□□ -1.33
CLK3-212ENST00000563418 GOLGA8FQ08AF8 430 aa6.77□□□□□ -1.33
CLK3-212ENST00000563418 GOLGA8DPQ0D2H9 430 aa6.77□□□□□ -1.33
CLK3-212ENST00000563418 CNGA3Q16281 694 aa6.77□□□□□ -1.33
CLK3-212ENST00000563418 TMOD4Q9NZQ9 345 aa6.77□□□□□ -1.33
CLK3-212ENST00000563418 UBE4BO95155 1302 aa6.77□□□□□ -1.33
CLK3-212ENST00000563418 HDLBPQ00341 1268 aaKnown RBP6.77□□□□□ -1.33
CLK3-212ENST00000563418 WLSQ5T9L3 541 aa6.77□□□□□ -1.33
CLK3-212ENST00000563418 SULT6B1Q6IMI4 303 aa6.77□□□□□ -1.33
CLK3-212ENST00000563418 RBM41Q96IZ5 413 aaKnown RBP6.77□□□□□ -1.33
CLK3-212ENST00000563418 ACADVLP49748 655 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms