RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ESYT2A0FGR8 921 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 SMCO2A6NFE2 343 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 B4DLN1 442 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 DYNC1LI2O43237 492 aaPredicted RBP9.82□□□□□ -0.84
UBR1-204ENST00000563239 MYCLP12524 364 aaPredicted RBP9.82□□□□□ -0.84
UBR1-204ENST00000563239 MRPL12P52815 198 aaKnown RBP9.82□□□□□ -0.84
UBR1-204ENST00000563239 BEX3Q00994 111 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 SP2Q02086 613 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 KCNA10Q16322 511 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 LRRC26Q2I0M4 334 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 SEPT14Q6ZU15 432 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 NOL8Q76FK4 1167 aaKnown RBP9.82□□□□□ -0.84
UBR1-204ENST00000563239 RNF180Q86T96 592 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 TLK2Q86UE8 772 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 SMARCC2Q8TAQ2 1214 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 SCFD2Q8WU76 684 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 CUL5Q93034 780 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 GTF3C6Q969F1 213 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 TBC1D32Q96NH3 1257 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 AIFM3Q96NN9 605 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 MPHOSPH6Q99547 160 aaKnown RBP9.82□□□□□ -0.84
UBR1-204ENST00000563239 TSEN34Q9BSV6 310 aaKnown RBP9.82□□□□□ -0.84
UBR1-204ENST00000563239 SENP6Q9GZR1 1112 aaPredicted RBP9.82□□□□□ -0.84
UBR1-204ENST00000563239 ZMYND12Q9H0C1 365 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 SLKQ9H2G2 1235 aaPredicted RBP9.82□□□□□ -0.84
UBR1-204ENST00000563239 TMEM260Q9NX78 707 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 RBM27Q9P2N5 1060 aaKnown RBP9.82□□□□□ -0.84
UBR1-204ENST00000563239 DDX41Q9UJV9 622 aaKnown RBP9.82□□□□□ -0.84
UBR1-204ENST00000563239 PCDHA6Q9UN73 950 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 PCDHA8Q9Y5H6 950 aa9.82□□□□□ -0.84
UBR1-204ENST00000563239 A0A1W2PQ45 241 aaPredicted RBP9.81□□□□□ -0.84
UBR1-204ENST00000563239 A0A1W2PQY0 241 aa9.81□□□□□ -0.84
UBR1-204ENST00000563239 KBTBD13C9JR72 458 aa9.81□□□□□ -0.84
UBR1-204ENST00000563239 C6orf222P0C671 652 aaPredicted RBP9.81□□□□□ -0.84
UBR1-204ENST00000563239 TXNP10599 105 aaKnown RBP9.81□□□□□ -0.84
UBR1-204ENST00000563239 FDPSP14324 419 aaKnown RBP9.81□□□□□ -0.84
UBR1-204ENST00000563239 CCND2P30279 289 aa9.81□□□□□ -0.84
UBR1-204ENST00000563239 ADCY7P51828 1080 aa9.81□□□□□ -0.84
UBR1-204ENST00000563239 ACLYP53396 1101 aa9.81□□□□□ -0.84
UBR1-204ENST00000563239 ARHGAP1Q07960 439 aa9.81□□□□□ -0.84
UBR1-204ENST00000563239 SSRP1Q08945 709 aaKnown RBP9.81□□□□□ -0.84
UBR1-204ENST00000563239 SEMA3FQ13275 785 aa9.81□□□□□ -0.84
UBR1-204ENST00000563239 SNX17Q15036 470 aa9.81□□□□□ -0.84
UBR1-204ENST00000563239 NPY5RQ15761 445 aa9.81□□□□□ -0.84
UBR1-204ENST00000563239 FSCN1Q16658 493 aaKnown RBP9.81□□□□□ -0.84
UBR1-204ENST00000563239 LY6KQ17RY6 165 aa9.81□□□□□ -0.84
UBR1-204ENST00000563239 GNASQ5JWF2 1037 aa9.81□□□□□ -0.84
UBR1-204ENST00000563239 PCNX4Q63HM2 1172 aa9.81□□□□□ -0.84
UBR1-204ENST00000563239 TEX2Q8IWB9 1127 aa9.81□□□□□ -0.84
UBR1-204ENST00000563239 CRYGNQ8WXF5 182 aa9.81□□□□□ -0.84
UBR1-204ENST00000563239 FERMT2Q96AC1 680 aa9.81□□□□□ -0.84
UBR1-204ENST00000563239 PGBD1Q96JS3 809 aa9.81□□□□□ -0.84
UBR1-204ENST00000563239 INPP4AQ96PE3 977 aaPredicted RBP9.81□□□□□ -0.84
UBR1-204ENST00000563239 BCAS3Q9H6U6 928 aa9.81□□□□□ -0.84
UBR1-204ENST00000563239 VPS54Q9P1Q0 977 aa9.81□□□□□ -0.84
UBR1-204ENST00000563239 KIAA1217Q5T5P2 1943 aa9.81□□□□□ -0.84
UBR1-204ENST00000563239 SPATA31C2B4DYI2 1134 aa9.8□□□□□ -0.84
UBR1-204ENST00000563239 CPLX1O14810 134 aa9.8□□□□□ -0.84
UBR1-204ENST00000563239 NKRFO15226 690 aaKnown RBP eCLIP9.8□□□□□ -0.84
UBR1-204ENST00000563239 EDIL3O43854 480 aa9.8□□□□□ -0.84
UBR1-204ENST00000563239 CD2BP2O95400 341 aaKnown RBP9.8□□□□□ -0.84
UBR1-204ENST00000563239 DEXIO95424 95 aa9.8□□□□□ -0.84
UBR1-204ENST00000563239 ASGR1P07306 291 aa9.8□□□□□ -0.84
UBR1-204ENST00000563239 ITGB5P18084 799 aa9.8□□□□□ -0.84
UBR1-204ENST00000563239 ICAM3P32942 547 aa9.8□□□□□ -0.84
UBR1-204ENST00000563239 ATN1P54259 1190 aaPredicted RBP9.8□□□□□ -0.84
UBR1-204ENST00000563239 AKAP17AQ02040 695 aaKnown RBP9.8□□□□□ -0.84
UBR1-204ENST00000563239 TTLL4Q14679 1199 aa9.8□□□□□ -0.84
UBR1-204ENST00000563239 XRRA1Q6P2D8 792 aa9.8□□□□□ -0.84
UBR1-204ENST00000563239 SLC39A5Q6ZMH5 540 aa9.8□□□□□ -0.84
UBR1-204ENST00000563239 NSUN7Q8NE18 718 aaKnown RBP9.8□□□□□ -0.84
UBR1-204ENST00000563239 HTATIP2Q9BUP3 242 aa9.8□□□□□ -0.84
UBR1-204ENST00000563239 SH3GLB2Q9NR46 395 aa9.8□□□□□ -0.84
UBR1-204ENST00000563239 GJB4Q9NTQ9 266 aa9.8□□□□□ -0.84
UBR1-204ENST00000563239 RTEL1Q9NZ71 1219 aa9.8□□□□□ -0.84
UBR1-204ENST00000563239 LIMCH1Q9UPQ0 1083 aa9.8□□□□□ -0.84
UBR1-204ENST00000563239 UBIAD1Q9Y5Z9 338 aa9.8□□□□□ -0.84
UBR1-204ENST00000563239 GRIN2DO15399 1336 aa9.8□□□□□ -0.84
UBR1-204ENST00000563239 STK36Q9NRP7 1315 aa9.8□□□□□ -0.84
UBR1-204ENST00000563239 MOXD2PA6NHM9 499 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 A6NJR5 290 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 SPDYE3A6NKU9 549 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 M0R2N6 131 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 JAK2O60674 1132 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 STAM2O75886 525 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 UBA1P22314 1058 aaKnown RBP9.79□□□□□ -0.84
UBR1-204ENST00000563239 SREBF1P36956 1147 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 CDK7P50613 346 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 MKRN4PQ13434 485 aaPredicted RBP9.79□□□□□ -0.84
UBR1-204ENST00000563239 RABEP1Q15276 862 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 C1orf53Q5VUE5 145 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 JAKMIP3Q5VZ66 844 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 CXCL17Q6UXB2 119 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 TRIM22Q8IYM9 498 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 PCSK9Q8NBP7 692 aaKnown RBP9.79□□□□□ -0.84
UBR1-204ENST00000563239 OR6J1Q8NGC5 347 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 CYP2W1Q8TAV3 490 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 RASGRP4Q8TDF6 673 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 DPF3Q92784 378 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 EMID1Q96A84 441 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms