RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 JAZF1Q86VZ6 243 aa4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 SP8Q8IXZ3 490 aa4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 TP53I13Q8NBR0 393 aaPredicted RBP4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 CXorf38Q8TB03 319 aa4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 FEZF2Q8TBJ5 459 aa4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 SH3TC2Q8TF17 1288 aa4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 OSBP2Q969R2 916 aa4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 C1orf159Q96HA4 380 aa4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 RNPC3Q96LT9 517 aaKnown RBP4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 LUC7LQ9NQ29 371 aaKnown RBP4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 TLDC2A0PJX2 215 aa4.82□□□□□ -1.64
SHCBP1-202ENST00000563219 FFAR3O14843 346 aa4.82□□□□□ -1.64
SHCBP1-202ENST00000563219 DLX3O60479 287 aa4.82□□□□□ -1.64
SHCBP1-202ENST00000563219 SNRPB2P08579 225 aaKnown RBP4.82□□□□□ -1.64
SHCBP1-202ENST00000563219 PABPC1P11940 636 aaKnown RBP4.82□□□□□ -1.64
SHCBP1-202ENST00000563219 SYN1P17600 705 aa4.82□□□□□ -1.64
SHCBP1-202ENST00000563219 SLC35F1Q5T1Q4 408 aa4.82□□□□□ -1.64
SHCBP1-202ENST00000563219 ACBD5Q5T8D3 534 aaPredicted RBP4.82□□□□□ -1.64
SHCBP1-202ENST00000563219 YOD1Q5VVQ6 348 aaPredicted RBP4.82□□□□□ -1.64
SHCBP1-202ENST00000563219 SCUBE1Q8IWY4 988 aa4.82□□□□□ -1.64
SHCBP1-202ENST00000563219 SYT8Q8NBV8 401 aa4.82□□□□□ -1.64
SHCBP1-202ENST00000563219 KREMEN2Q8NCW0 462 aa4.82□□□□□ -1.64
SHCBP1-202ENST00000563219 ZSWIM2Q8NEG5 633 aa4.82□□□□□ -1.64
SHCBP1-202ENST00000563219 NPLOC4Q8TAT6 608 aa4.82□□□□□ -1.64
SHCBP1-202ENST00000563219 KCTD13Q8WZ19 329 aa4.82□□□□□ -1.64
SHCBP1-202ENST00000563219 KISS1RQ969F8 398 aaPredicted RBP4.82□□□□□ -1.64
SHCBP1-202ENST00000563219 IER2Q9BTL4 223 aa4.82□□□□□ -1.64
SHCBP1-202ENST00000563219 TMEM260Q9NX78 707 aa4.82□□□□□ -1.64
SHCBP1-202ENST00000563219 PTCH2Q9Y6C5 1203 aa4.82□□□□□ -1.64
SHCBP1-202ENST00000563219 TRBV23OR9-2A0A075B6M9 112 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 TRBV23-1A0A0A0MS06 115 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 CCDC163A0A0D9SF12 145 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 ZC3H12DA2A288 527 aaKnown RBP4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 ENPP3O14638 875 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 PRODHO43272 600 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 THBDP07204 575 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 GLI4P10075 376 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 NCAM1P13591 858 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 ATF2P15336 505 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 TACR1P25103 407 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 LIMS1P48059 325 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 SEPHS1P49903 392 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 FOXO4P98177 505 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 SQSTM1Q13501 440 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 SF1Q15637 639 aaKnown RBP4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 FOXB2Q5VYV0 432 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 E4F1Q66K89 784 aaPredicted RBP4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 NSMFQ6X4W1 530 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 ZDHHC14Q8IZN3 488 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 TMEM145Q8NBT3 493 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 FRS2Q8WU20 508 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 EXOC2Q96KP1 924 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 DHRS4Q9BTZ2 278 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 RNF38Q9H0F5 515 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 KANSL2Q9H9L4 492 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 PLA2G2DQ9UNK4 145 aa4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 TMA7Q9Y2S6 64 aaKnown RBP4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 MRPL42Q9Y6G3 142 aaKnown RBP4.81□□□□□ -1.64
SHCBP1-202ENST00000563219 PPP1R11O60927 126 aaPredicted RBP4.8□□□□□ -1.64
SHCBP1-202ENST00000563219 ECI1P42126 302 aa4.8□□□□□ -1.64
SHCBP1-202ENST00000563219 SUMO1P63165 101 aaKnown RBP4.8□□□□□ -1.64
SHCBP1-202ENST00000563219 IQCEQ6IPM2 695 aa4.8□□□□□ -1.64
SHCBP1-202ENST00000563219 DENND5AQ6IQ26 1287 aa4.8□□□□□ -1.64
SHCBP1-202ENST00000563219 FRMD5Q7Z6J6 570 aa4.8□□□□□ -1.64
SHCBP1-202ENST00000563219 MMP19Q99542 508 aa4.8□□□□□ -1.64
SHCBP1-202ENST00000563219 CDC6Q99741 560 aa4.8□□□□□ -1.64
SHCBP1-202ENST00000563219 GPRC5CQ9NQ84 441 aa4.8□□□□□ -1.64
SHCBP1-202ENST00000563219 DBR1Q9UK59 544 aaKnown RBP4.8□□□□□ -1.64
SHCBP1-202ENST00000563219 NPFFR2Q9Y5X5 522 aa4.8□□□□□ -1.64
SHCBP1-202ENST00000563219 NPHP3-ACAD11A0A0J9YXS1 232 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 ESYT3A0FGR9 886 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 ARNTLO00327 626 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 ASGR2P07307 311 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 PLS3P13797 630 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 PAMP19021 973 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 KCNJ6P48051 423 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 KCNC1P48547 511 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 SLURP1P55000 103 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 HTRA3P83110 453 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 RBM10P98175 930 aaKnown RBP4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 KCNAB2Q13303 367 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 NTRK3Q16288 839 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 PRSS53Q2L4Q9 553 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 SKOR2Q2VWA4 1001 aaPredicted RBP4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 VWA3BQ502W6 1294 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 FAM209AQ5JX71 171 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 HOMER1Q86YM7 354 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 LZTR1Q8N653 840 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 FNIP1Q8TF40 1166 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 TSPAN17Q96FV3 270 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 TEPSINQ96N21 525 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 CLEC1BQ9P126 229 aa4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 MRPS23Q9Y3D9 190 aaKnown RBP4.79□□□□□ -1.64
SHCBP1-202ENST00000563219 MEFVO15553 781 aaPredicted RBP4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 PLA2G1BP04054 148 aaKnown RBP4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 CELA3BP08861 270 aa4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 C6orf222P0C671 652 aaPredicted RBP4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 SLC9A5Q14940 896 aa4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 ERICH6BQ5W0A0 696 aa4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 MBLAC2Q68D91 279 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms