RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 RIC8AQ9NPQ8 531 aa21.49■■□□□ 1.03
CDH11-206ENST00000562998 RBM27Q9P2N5 1060 aaKnown RBP21.49■■□□□ 1.03
CDH11-206ENST00000562998 DDX41Q9UJV9 622 aaKnown RBP21.49■■□□□ 1.03
CDH11-206ENST00000562998 TPCN1Q9ULQ1 816 aa21.49■■□□□ 1.03
CDH11-206ENST00000562998 ELP1O95163 1332 aa21.49■■□□□ 1.03
CDH11-206ENST00000562998 CCND2P30279 289 aa21.48■■□□□ 1.03
CDH11-206ENST00000562998 AK2P54819 239 aa21.48■■□□□ 1.03
CDH11-206ENST00000562998 NAPAP54920 295 aa21.48■■□□□ 1.03
CDH11-206ENST00000562998 SEPT14Q6ZU15 432 aa21.48■■□□□ 1.03
CDH11-206ENST00000562998 C7orf61Q8IZ16 206 aa21.48■■□□□ 1.03
CDH11-206ENST00000562998 COPS5Q92905 334 aa21.48■■□□□ 1.03
CDH11-206ENST00000562998 PHKBQ93100 1093 aa21.48■■□□□ 1.03
CDH11-206ENST00000562998 INPP4AQ96PE3 977 aaPredicted RBP21.48■■□□□ 1.03
CDH11-206ENST00000562998 KIF2CQ99661 725 aa21.48■■□□□ 1.03
CDH11-206ENST00000562998 ESYT2A0FGR8 921 aa21.47■■□□□ 1.03
CDH11-206ENST00000562998 A6NJR5 290 aa21.47■■□□□ 1.03
CDH11-206ENST00000562998 STAM2O75886 525 aa21.47■■□□□ 1.03
CDH11-206ENST00000562998 MYCLP12524 364 aaPredicted RBP21.47■■□□□ 1.03
CDH11-206ENST00000562998 CLK2P49760 499 aaKnown RBP21.47■■□□□ 1.03
CDH11-206ENST00000562998 RTP1P59025 263 aa21.47■■□□□ 1.03
CDH11-206ENST00000562998 ARHGAP1Q07960 439 aa21.47■■□□□ 1.03
CDH11-206ENST00000562998 UBE2SQ16763 222 aa21.47■■□□□ 1.03
CDH11-206ENST00000562998 LY6KQ17RY6 165 aa21.47■■□□□ 1.03
CDH11-206ENST00000562998 PCNX4Q63HM2 1172 aa21.47■■□□□ 1.03
CDH11-206ENST00000562998 XRRA1Q6P2D8 792 aa21.47■■□□□ 1.03
CDH11-206ENST00000562998 EMID1Q96A84 441 aaPredicted RBP21.47■■□□□ 1.03
CDH11-206ENST00000562998 TGFB3P10600 412 aa21.46■■□□□ 1.03
CDH11-206ENST00000562998 ICAM3P32942 547 aa21.46■■□□□ 1.03
CDH11-206ENST00000562998 CDK7P50613 346 aa21.46■■□□□ 1.03
CDH11-206ENST00000562998 ANKRD1Q15327 319 aa21.46■■□□□ 1.03
CDH11-206ENST00000562998 SLC43A3Q8NBI5 491 aa21.46■■□□□ 1.03
CDH11-206ENST00000562998 OR6J1Q8NGC5 347 aa21.46■■□□□ 1.03
CDH11-206ENST00000562998 GLT1D1Q96MS3 346 aa21.46■■□□□ 1.03
CDH11-206ENST00000562998 ZMYND12Q9H0C1 365 aa21.46■■□□□ 1.03
CDH11-206ENST00000562998 STARD7Q9NQZ5 370 aa21.46■■□□□ 1.03
CDH11-206ENST00000562998 SMCO2A6NFE2 343 aa21.45■■□□□ 1.02
CDH11-206ENST00000562998 PFKFB2O60825 505 aa21.45■■□□□ 1.02
CDH11-206ENST00000562998 RBM25P49756 843 aaKnown RBP21.45■■□□□ 1.02
CDH11-206ENST00000562998 CPT1AP50416 773 aa21.45■■□□□ 1.02
CDH11-206ENST00000562998 SCRN1Q12765 414 aa21.45■■□□□ 1.02
CDH11-206ENST00000562998 TRIM60Q495X7 471 aa21.45■■□□□ 1.02
CDH11-206ENST00000562998 KCNV1Q6PIU1 500 aa21.45■■□□□ 1.02
CDH11-206ENST00000562998 CXCL17Q6UXB2 119 aa21.45■■□□□ 1.02
CDH11-206ENST00000562998 ANKRD33Q7Z3H0 272 aa21.45■■□□□ 1.02
CDH11-206ENST00000562998 PRO3102Q9H379 93 aa21.45■■□□□ 1.02
CDH11-206ENST00000562998 PCDHA6Q9UN73 950 aa21.45■■□□□ 1.02
CDH11-206ENST00000562998 PCDHA8Q9Y5H6 950 aa21.45■■□□□ 1.02
CDH11-206ENST00000562998 GRIN2DO15399 1336 aa21.45■■□□□ 1.02
CDH11-206ENST00000562998 ZEB2O60315 1214 aa21.44■■□□□ 1.02
CDH11-206ENST00000562998 CABYRO75952 493 aa21.44■■□□□ 1.02
CDH11-206ENST00000562998 GH1P01241 217 aa21.44■■□□□ 1.02
CDH11-206ENST00000562998 ADCY7P51828 1080 aa21.44■■□□□ 1.02
CDH11-206ENST00000562998 NEK4P51957 841 aa21.44■■□□□ 1.02
CDH11-206ENST00000562998 PURAQ00577 322 aaKnown RBP21.44■■□□□ 1.02
CDH11-206ENST00000562998 SP2Q02086 613 aa21.44■■□□□ 1.02
CDH11-206ENST00000562998 STK3Q13188 491 aa21.44■■□□□ 1.02
CDH11-206ENST00000562998 SEMA3FQ13275 785 aa21.44■■□□□ 1.02
CDH11-206ENST00000562998 ZFP91Q96JP5 570 aaPredicted RBP21.44■■□□□ 1.02
CDH11-206ENST00000562998 TOX2Q96NM4 488 aa21.44■■□□□ 1.02
CDH11-206ENST00000562998 SLC26A6Q9BXS9 759 aa21.44■■□□□ 1.02
CDH11-206ENST00000562998 GLT8D2Q9H1C3 349 aa21.44■■□□□ 1.02
CDH11-206ENST00000562998 MRVI1Q9Y6F6 885 aa21.44■■□□□ 1.02
CDH11-206ENST00000562998 RANBP2P49792 3224 aaKnown RBP21.44■■□□□ 1.02
CDH11-206ENST00000562998 SPATA31C2B4DYI2 1134 aa21.43■■□□□ 1.02
CDH11-206ENST00000562998 ADAMTS3O15072 1205 aa21.43■■□□□ 1.02
CDH11-206ENST00000562998 PPFIA3O75145 1194 aa21.43■■□□□ 1.02
CDH11-206ENST00000562998 TLE2Q04725 743 aa21.43■■□□□ 1.02
CDH11-206ENST00000562998 ATP11BQ9Y2G3 1177 aa21.43■■□□□ 1.02
CDH11-206ENST00000562998 SCN10AQ9Y5Y9 1956 aa21.43■■□□□ 1.02
CDH11-206ENST00000562998 A0A0U1RQG5 324 aaPredicted RBP21.42■■□□□ 1.02
CDH11-206ENST00000562998 SPDYE3A6NKU9 549 aa21.42■■□□□ 1.02
CDH11-206ENST00000562998 FOSP01100 380 aaPredicted RBP21.42■■□□□ 1.02
CDH11-206ENST00000562998 HOXD8P13378 290 aaPredicted RBP21.42■■□□□ 1.02
CDH11-206ENST00000562998 MYSM1Q5VVJ2 828 aa21.42■■□□□ 1.02
CDH11-206ENST00000562998 SLKQ9H2G2 1235 aaPredicted RBP21.42■■□□□ 1.02
CDH11-206ENST00000562998 SH3GLB2Q9NR46 395 aa21.42■■□□□ 1.02
CDH11-206ENST00000562998 POLR3EQ9NVU0 708 aa21.42■■□□□ 1.02
CDH11-206ENST00000562998 ZMYND8Q9ULU4 1186 aaPredicted RBP21.42■■□□□ 1.02
CDH11-206ENST00000562998 UBIAD1Q9Y5Z9 338 aa21.42■■□□□ 1.02
CDH11-206ENST00000562998 ARVCFO00192 962 aa21.41■■□□□ 1.02
CDH11-206ENST00000562998 KPNA6O60684 536 aa21.41■■□□□ 1.02
CDH11-206ENST00000562998 LARGE1O95461 756 aa21.41■■□□□ 1.02
CDH11-206ENST00000562998 CTDNEP1O95476 244 aa21.41■■□□□ 1.02
CDH11-206ENST00000562998 MMP3P08254 477 aa21.41■■□□□ 1.02
CDH11-206ENST00000562998 ITGB5P18084 799 aa21.41■■□□□ 1.02
CDH11-206ENST00000562998 UBA1P22314 1058 aaKnown RBP21.41■■□□□ 1.02
CDH11-206ENST00000562998 AKAP17AQ02040 695 aaKnown RBP21.41■■□□□ 1.02
CDH11-206ENST00000562998 SSRP1Q08945 709 aaKnown RBP21.41■■□□□ 1.02
CDH11-206ENST00000562998 AP3B2Q13367 1082 aa21.41■■□□□ 1.02
CDH11-206ENST00000562998 ME3Q16798 604 aa21.41■■□□□ 1.02
CDH11-206ENST00000562998 GNPTABQ3T906 1256 aa21.41■■□□□ 1.02
CDH11-206ENST00000562998 CELF3Q5SZQ8 465 aaKnown RBP21.41■■□□□ 1.02
CDH11-206ENST00000562998 CCDC12Q8WUD4 166 aaPredicted RBP21.41■■□□□ 1.02
CDH11-206ENST00000562998 AFG1LQ8WV93 481 aa21.41■■□□□ 1.02
CDH11-206ENST00000562998 CRYGNQ8WXF5 182 aa21.41■■□□□ 1.02
CDH11-206ENST00000562998 GDF15Q99988 308 aa21.41■■□□□ 1.02
CDH11-206ENST00000562998 C22orf23Q9BZE7 217 aa21.41■■□□□ 1.02
CDH11-206ENST00000562998 PDLIM7Q9NR12 457 aa21.41■■□□□ 1.02
CDH11-206ENST00000562998 RTEL1Q9NZ71 1219 aa21.41■■□□□ 1.02
CDH11-206ENST00000562998 MYH7BA7E2Y1 1941 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms