RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 APOBRQ0VD83 1088 aa19.13■□□□□ 0.65
CDT1-202ENST00000562747 FAM126BQ8IXS8 530 aa19.13■□□□□ 0.65
CDT1-202ENST00000562747 CMTR1Q8N1G2 835 aaKnown RBP19.13■□□□□ 0.65
CDT1-202ENST00000562747 SYTL5Q8TDW5 730 aaPredicted RBP19.13■□□□□ 0.65
CDT1-202ENST00000562747 PIBF1Q8WXW3 757 aa19.13■□□□□ 0.65
CDT1-202ENST00000562747 TIFAQ96CG3 184 aa19.13■□□□□ 0.65
CDT1-202ENST00000562747 VTA1Q9NP79 307 aa19.13■□□□□ 0.65
CDT1-202ENST00000562747 PRDM6Q9NQX0 595 aa19.13■□□□□ 0.65
CDT1-202ENST00000562747 MROH7Q68CQ1 1323 aa19.13■□□□□ 0.65
CDT1-202ENST00000562747 TTC28Q96AY4 2481 aa19.13■□□□□ 0.65
CDT1-202ENST00000562747 CHD9Q3L8U1 2897 aa19.12■□□□□ 0.65
CDT1-202ENST00000562747 NID2Q14112 1375 aa19.12■□□□□ 0.65
CDT1-202ENST00000562747 ARVCFO00192 962 aa19.12■□□□□ 0.65
CDT1-202ENST00000562747 CFBP00751 764 aa19.12■□□□□ 0.65
CDT1-202ENST00000562747 ACRP10323 421 aa19.12■□□□□ 0.65
CDT1-202ENST00000562747 EDNRBP24530 442 aa19.12■□□□□ 0.65
CDT1-202ENST00000562747 PPIGQ13427 754 aaKnown RBP eCLIP19.12■□□□□ 0.652e-8■□□□□ 11
CDT1-202ENST00000562747 GNASQ5JWF2 1037 aa19.12■□□□□ 0.65
CDT1-202ENST00000562747 PCSK9Q8NBP7 692 aaKnown RBP19.12■□□□□ 0.65
CDT1-202ENST00000562747 PBX4Q9BYU1 374 aa19.12■□□□□ 0.65
CDT1-202ENST00000562747 CNTNAP5Q8WYK1 1306 aa19.11■□□□□ 0.65
CDT1-202ENST00000562747 CCDC196A0A1B0GTZ2 297 aa19.11■□□□□ 0.65
CDT1-202ENST00000562747 METAP2P50579 478 aaKnown RBP eCLIP19.11■□□□□ 0.658e-10■■■■□ 19.3
CDT1-202ENST00000562747 EVCP57679 992 aa19.11■□□□□ 0.65
CDT1-202ENST00000562747 CCDC82Q8N4S0 544 aa19.11■□□□□ 0.65
CDT1-202ENST00000562747 NSUN6Q8TEA1 469 aaKnown RBP19.11■□□□□ 0.65
CDT1-202ENST00000562747 VTI1AQ96AJ9 217 aa19.11■□□□□ 0.65
CDT1-202ENST00000562747 TAAR1Q96RJ0 339 aa19.11■□□□□ 0.65
CDT1-202ENST00000562747 COL20A1Q9P218 1284 aa19.11■□□□□ 0.65
CDT1-202ENST00000562747 NAP1L2Q9ULW6 460 aaPredicted RBP19.11■□□□□ 0.65
CDT1-202ENST00000562747 UMODL1Q5DID0 1318 aa19.1■□□□□ 0.65
CDT1-202ENST00000562747 GCOM1H8Y6P7 765 aaPredicted RBP19.1■□□□□ 0.65
CDT1-202ENST00000562747 CD4P01730 458 aa19.1■□□□□ 0.65
CDT1-202ENST00000562747 POLR2MP0CAP2 368 aa19.1■□□□□ 0.65
CDT1-202ENST00000562747 CDC27P30260 824 aa19.1■□□□□ 0.65
CDT1-202ENST00000562747 CYP2C18P33260 490 aa19.1■□□□□ 0.65
CDT1-202ENST00000562747 NKX3-2P78367 333 aa19.1■□□□□ 0.65
CDT1-202ENST00000562747 PDE4DQ08499 809 aa19.1■□□□□ 0.65
CDT1-202ENST00000562747 IQSEC1Q6DN90 963 aa19.1■□□□□ 0.65
CDT1-202ENST00000562747 TAPT1Q6NXT6 567 aa19.1■□□□□ 0.65
CDT1-202ENST00000562747 ZNF365Q70YC5 407 aa19.1■□□□□ 0.65
CDT1-202ENST00000562747 FBXO16Q8IX29 292 aaPredicted RBP19.1■□□□□ 0.65
CDT1-202ENST00000562747 IL17RAQ96F46 866 aa19.1■□□□□ 0.65
CDT1-202ENST00000562747 IWS1Q96ST2 819 aa19.1■□□□□ 0.65
CDT1-202ENST00000562747 RMDN3Q96TC7 470 aa19.1■□□□□ 0.65
CDT1-202ENST00000562747 SPC25Q9HBM1 224 aa19.1■□□□□ 0.65
CDT1-202ENST00000562747 FAM217BQ9NTX9 383 aaPredicted RBP19.1■□□□□ 0.65
CDT1-202ENST00000562747 MUC3AQ02505 3323 aa19.1■□□□□ 0.65
CDT1-202ENST00000562747 FUT2Q10981 343 aa19.09■□□□□ 0.65
CDT1-202ENST00000562747 TOB2Q14106 344 aaPredicted RBP19.09■□□□□ 0.65
CDT1-202ENST00000562747 TMEM63BQ5T3F8 832 aa19.09■□□□□ 0.65
CDT1-202ENST00000562747 ARHGEF16Q5VV41 709 aa19.09■□□□□ 0.65
CDT1-202ENST00000562747 CXCL17Q6UXB2 119 aa19.09■□□□□ 0.65
CDT1-202ENST00000562747 EEPD1Q7L9B9 569 aa19.09■□□□□ 0.65
CDT1-202ENST00000562747 UPF3BQ9BZI7 483 aaKnown RBP19.09■□□□□ 0.65
CDT1-202ENST00000562747 PRDM12Q9H4Q4 367 aa19.09■□□□□ 0.65
CDT1-202ENST00000562747 GNEQ9Y223 722 aaKnown RBP19.09■□□□□ 0.65
CDT1-202ENST00000562747 GRIN2DO15399 1336 aa19.08■□□□□ 0.65
CDT1-202ENST00000562747 SEC24BO95487 1268 aa19.08■□□□□ 0.64
CDT1-202ENST00000562747 TNFAIP2Q03169 654 aa19.08■□□□□ 0.64
CDT1-202ENST00000562747 C8orf34Q49A92 452 aa19.08■□□□□ 0.64
CDT1-202ENST00000562747 TMEM199Q8N511 208 aa19.08■□□□□ 0.64
CDT1-202ENST00000562747 SLC43A3Q8NBI5 491 aa19.08■□□□□ 0.64
CDT1-202ENST00000562747 PXMP2Q9NR77 195 aa19.08■□□□□ 0.64
CDT1-202ENST00000562747 PDRG1Q9NUG6 133 aa19.08■□□□□ 0.64
CDT1-202ENST00000562747 CXXC1Q9P0U4 656 aaPredicted RBP19.08■□□□□ 0.64
CDT1-202ENST00000562747 RBM47A0AV96 593 aaKnown RBP19.07■□□□□ 0.64
CDT1-202ENST00000562747 SMPD1P17405 629 aa19.07■□□□□ 0.64
CDT1-202ENST00000562747 HOXA13P31271 388 aaPredicted RBP19.07■□□□□ 0.64
CDT1-202ENST00000562747 ADD1P35611 737 aaKnown RBP19.07■□□□□ 0.64
CDT1-202ENST00000562747 PSRC1Q6PGN9 363 aaPredicted RBP19.07■□□□□ 0.64
CDT1-202ENST00000562747 TLK2Q86UE8 772 aa19.07■□□□□ 0.64
CDT1-202ENST00000562747 PDGFCQ9NRA1 345 aa19.07■□□□□ 0.64
CDT1-202ENST00000562747 Q9Y3F1 56 aa19.07■□□□□ 0.64
CDT1-202ENST00000562747 hCG_1642624A0A1W2PR95 340 aa19.06■□□□□ 0.64
CDT1-202ENST00000562747 hCG_1984214I3L0E3 225 aa19.06■□□□□ 0.64
CDT1-202ENST00000562747 PIK3CDO00329 1044 aa19.06■□□□□ 0.64
CDT1-202ENST00000562747 TLR3O15455 904 aaKnown RBP19.06■□□□□ 0.64
CDT1-202ENST00000562747 PDIA3P30101 505 aaKnown RBP19.06■□□□□ 0.64
CDT1-202ENST00000562747 ADGRE1Q14246 886 aa19.06■□□□□ 0.64
CDT1-202ENST00000562747 STXBP2Q15833 593 aa19.06■□□□□ 0.64
CDT1-202ENST00000562747 TJAP1Q5JTD0 557 aa19.06■□□□□ 0.64
CDT1-202ENST00000562747 NOL8Q76FK4 1167 aaKnown RBP19.06■□□□□ 0.64
CDT1-202ENST00000562747 ZNF713Q8N859 430 aaPredicted RBP19.06■□□□□ 0.64
CDT1-202ENST00000562747 PPM1EQ8WY54 764 aa19.06■□□□□ 0.64
CDT1-202ENST00000562747 CUL5Q93034 780 aa19.06■□□□□ 0.64
CDT1-202ENST00000562747 ZNF274Q96GC6 653 aaPredicted RBP19.06■□□□□ 0.64
CDT1-202ENST00000562747 ALDH8A1Q9H2A2 487 aaPredicted RBP19.06■□□□□ 0.64
CDT1-202ENST00000562747 IL23AQ9NPF7 189 aa19.06■□□□□ 0.64
CDT1-202ENST00000562747 NR3C2P08235 984 aa19.05■□□□□ 0.64
CDT1-202ENST00000562747 EIF2AK2P19525 551 aaKnown RBP19.05■□□□□ 0.64
CDT1-202ENST00000562747 PSMC6P62333 389 aa19.05■□□□□ 0.64
CDT1-202ENST00000562747 FSCN1Q16658 493 aaKnown RBP19.05■□□□□ 0.64
CDT1-202ENST00000562747 DUSP28Q4G0W2 176 aa19.05■□□□□ 0.64
CDT1-202ENST00000562747 HEATR3Q7Z4Q2 680 aa19.05■□□□□ 0.64
CDT1-202ENST00000562747 TEX2Q8IWB9 1127 aa19.05■□□□□ 0.64
CDT1-202ENST00000562747 SCFD2Q8WU76 684 aa19.05■□□□□ 0.64
CDT1-202ENST00000562747 HERVK_113Q902F9 699 aa19.05■□□□□ 0.64
CDT1-202ENST00000562747 SYMPKQ92797 1274 aaKnown RBP19.05■□□□□ 0.64
CDT1-202ENST00000562747 PDCD2LQ9BRP1 358 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms