RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 PWP2Q15269 919 aaKnown RBP15.76■□□□□ 0.11
CLK3-209ENST00000562670 IL17AQ16552 155 aa15.76■□□□□ 0.11
CLK3-209ENST00000562670 TMEM266Q2M3C6 531 aa15.76■□□□□ 0.11
CLK3-209ENST00000562670 CEP55Q53EZ4 464 aa15.76■□□□□ 0.11
CLK3-209ENST00000562670 RBM43Q6ZSC3 357 aaKnown RBP15.76■□□□□ 0.11
CLK3-209ENST00000562670 PTPN18Q99952 460 aa15.76■□□□□ 0.11
CLK3-209ENST00000562670 PDCD2LQ9BRP1 358 aa15.76■□□□□ 0.11
CLK3-209ENST00000562670 PAGR1Q9BTK6 254 aa15.76■□□□□ 0.11
CLK3-209ENST00000562670 CCSER1Q9C0I3 900 aa15.76■□□□□ 0.11
CLK3-209ENST00000562670 NUP62CLQ9H1M0 184 aa15.76■□□□□ 0.11
CLK3-209ENST00000562670 USP25Q9UHP3 1055 aa15.76■□□□□ 0.11
CLK3-209ENST00000562670 KCNH3Q9ULD8 1083 aa15.76■□□□□ 0.11
CLK3-209ENST00000562670 CYP2C8P10632 490 aa15.75■□□□□ 0.11
CLK3-209ENST00000562670 TXLNAP40222 546 aa15.75■□□□□ 0.11
CLK3-209ENST00000562670 SYKP43405 635 aa15.75■□□□□ 0.11
CLK3-209ENST00000562670 ZNF445P59923 1031 aa15.75■□□□□ 0.11
CLK3-209ENST00000562670 FAM110CQ1W6H9 321 aa15.75■□□□□ 0.11
CLK3-209ENST00000562670 ZSCAN23Q3MJ62 389 aa15.75■□□□□ 0.11
CLK3-209ENST00000562670 GPRC5AQ8NFJ5 357 aa15.75■□□□□ 0.11
CLK3-209ENST00000562670 NSUN6Q8TEA1 469 aaKnown RBP15.75■□□□□ 0.11
CLK3-209ENST00000562670 SYMPKQ92797 1274 aaKnown RBP15.75■□□□□ 0.11
CLK3-209ENST00000562670 HAS1Q92839 578 aa15.75■□□□□ 0.11
CLK3-209ENST00000562670 RMDN3Q96TC7 470 aa15.75■□□□□ 0.11
CLK3-209ENST00000562670 MEIS1O00470 390 aa15.74■□□□□ 0.11
CLK3-209ENST00000562670 ZNF202O95125 648 aa15.74■□□□□ 0.11
CLK3-209ENST00000562670 ERCC3P19447 782 aa15.74■□□□□ 0.11
CLK3-209ENST00000562670 MKRN3Q13064 507 aaKnown RBP15.74■□□□□ 0.11
CLK3-209ENST00000562670 PGM5Q15124 567 aa15.74■□□□□ 0.11
CLK3-209ENST00000562670 PRR16Q569H4 304 aa15.74■□□□□ 0.11
CLK3-209ENST00000562670 ABRAQ8N0Z2 381 aa15.74■□□□□ 0.11
CLK3-209ENST00000562670 ZNF784Q8NCA9 323 aaPredicted RBP15.74■□□□□ 0.11
CLK3-209ENST00000562670 TAAR1Q96RJ0 339 aa15.74■□□□□ 0.11
CLK3-209ENST00000562670 IWS1Q96ST2 819 aa15.74■□□□□ 0.11
CLK3-209ENST00000562670 ABT1Q9ULW3 272 aaKnown RBP15.74■□□□□ 0.11
CLK3-209ENST00000562670 UBIAD1Q9Y5Z9 338 aa15.74■□□□□ 0.11
CLK3-209ENST00000562670 STK24Q9Y6E0 443 aa15.74■□□□□ 0.11
CLK3-209ENST00000562670 LRRC37A2A6NM11 1700 aa15.74■□□□□ 0.11
CLK3-209ENST00000562670 IGF2BP3O00425 579 aaKnown RBP eCLIP15.73■□□□□ 0.11
CLK3-209ENST00000562670 YY1P25490 414 aa15.73■□□□□ 0.11
CLK3-209ENST00000562670 CCND2P30279 289 aa15.73■□□□□ 0.11
CLK3-209ENST00000562670 ZNF76P36508 570 aa15.73■□□□□ 0.11
CLK3-209ENST00000562670 ARHGEF16Q5VV41 709 aa15.73■□□□□ 0.11
CLK3-209ENST00000562670 NCAPG2Q86XI2 1143 aa15.73■□□□□ 0.11
CLK3-209ENST00000562670 REM2Q8IYK8 340 aaPredicted RBP15.73■□□□□ 0.11
CLK3-209ENST00000562670 ANKRD35Q8N283 1001 aa15.73■□□□□ 0.11
CLK3-209ENST00000562670 FAM133AQ8N9E0 248 aa15.73■□□□□ 0.11
CLK3-209ENST00000562670 MXRA8Q9BRK3 442 aa15.73■□□□□ 0.11
CLK3-209ENST00000562670 TTC12Q9H892 705 aaPredicted RBP15.73■□□□□ 0.11
CLK3-209ENST00000562670 CREBZFQ9NS37 354 aa15.73■□□□□ 0.11
CLK3-209ENST00000562670 ADD3Q9UEY8 706 aaKnown RBP15.73■□□□□ 0.11
CLK3-209ENST00000562670 DNAJC25-GNG10A0A024R161 153 aa15.72■□□□□ 0.11
CLK3-209ENST00000562670 RASSF10A6NK89 507 aa15.72■□□□□ 0.11
CLK3-209ENST00000562670 MSH4O15457 936 aa15.72■□□□□ 0.11
CLK3-209ENST00000562670 EDNRBP24530 442 aa15.72■□□□□ 0.11
CLK3-209ENST00000562670 TM4SF4P48230 202 aa15.72■□□□□ 0.11
CLK3-209ENST00000562670 MRPS9P82933 396 aaKnown RBP15.72■□□□□ 0.11
CLK3-209ENST00000562670 Q3C1V9 767 aa15.72■□□□□ 0.11
CLK3-209ENST00000562670 VSIG10LQ86VR7 867 aa15.72■□□□□ 0.11
CLK3-209ENST00000562670 PLA2G4DQ86XP0 818 aa15.72■□□□□ 0.11
CLK3-209ENST00000562670 IFNL1Q8IU54 200 aa15.72■□□□□ 0.11
CLK3-209ENST00000562670 IL31RAQ8NI17 732 aa15.72■□□□□ 0.11
CLK3-209ENST00000562670 SLC5A5Q92911 643 aa15.72■□□□□ 0.11
CLK3-209ENST00000562670 GPRASP2Q96D09 838 aa15.72■□□□□ 0.11
CLK3-209ENST00000562670 CCDC34Q96HJ3 373 aa15.72■□□□□ 0.11
CLK3-209ENST00000562670 EPSTI1Q96J88 318 aa15.72■□□□□ 0.11
CLK3-209ENST00000562670 INPP4AQ96PE3 977 aaPredicted RBP15.72■□□□□ 0.11
CLK3-209ENST00000562670 TNMDQ9H2S6 317 aa15.72■□□□□ 0.11
CLK3-209ENST00000562670 MAGEF1Q9HAY2 307 aa15.72■□□□□ 0.11
CLK3-209ENST00000562670 JADE2Q9NQC1 790 aa15.72■□□□□ 0.11
CLK3-209ENST00000562670 PCDHA12Q9UN75 941 aa15.72■□□□□ 0.11
CLK3-209ENST00000562670 B4DLN1 442 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 POTEB2H3BUK9 544 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 MAFGO15525 162 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 NR3C2P08235 984 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 ITGB5P18084 799 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 EIF2AK2P19525 551 aaKnown RBP15.71■□□□□ 0.11
CLK3-209ENST00000562670 TXKP42681 527 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 SPIRE1Q08AE8 756 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 NOGQ13253 232 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 KCTD2Q14681 263 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 E2F4Q16254 413 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 KANK3Q6NY19 840 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 USP49Q70CQ1 688 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 KCTD17Q8N5Z5 321 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 CDHR1Q96JP9 859 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 RIT2Q99578 217 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 WDR11Q9BZH6 1224 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 CUEDC2Q9H467 287 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 DISC1Q9NRI5 854 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 VAV3Q9UKW4 847 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 THSD7BQ9C0I4 1608 aa15.71■□□□□ 0.11
CLK3-209ENST00000562670 KDM3AQ9Y4C1 1321 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 ACTN4O43707 911 aaKnown RBP15.7■□□□□ 0.1
CLK3-209ENST00000562670 STRNO43815 780 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 PSMD10O75832 226 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 SLFN14P0C7P3 912 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 FCER1AP12319 257 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 MAPK4P31152 587 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 UBA7P41226 1012 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 TECP42680 631 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms