RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 CCDC62Q6P9F0 684 aa17.71■□□□□ 0.43
CCNDBP1-203ENST00000562553 PCSK9Q8NBP7 692 aaKnown RBP17.71■□□□□ 0.43
CCNDBP1-203ENST00000562553 OR6J1Q8NGC5 347 aa17.71■□□□□ 0.43
CCNDBP1-203ENST00000562553 SMARCC2Q8TAQ2 1214 aa17.71■□□□□ 0.43
CCNDBP1-203ENST00000562553 CUL5Q93034 780 aa17.71■□□□□ 0.43
CCNDBP1-203ENST00000562553 PSTPIP2Q9H939 334 aa17.71■□□□□ 0.43
CCNDBP1-203ENST00000562553 STARD7Q9NQZ5 370 aa17.71■□□□□ 0.43
CCNDBP1-203ENST00000562553 DOCK5Q9H7D0 1870 aa17.71■□□□□ 0.43
CCNDBP1-203ENST00000562553 CCDC196A0A1B0GTZ2 297 aa17.7■□□□□ 0.42
CCNDBP1-203ENST00000562553 STXBP3O00186 592 aa17.7■□□□□ 0.42
CCNDBP1-203ENST00000562553 EIF3JO75822 258 aaKnown RBP17.7■□□□□ 0.42
CCNDBP1-203ENST00000562553 NTRK3Q16288 839 aa17.7■□□□□ 0.42
CCNDBP1-203ENST00000562553 LY6KQ17RY6 165 aa17.7■□□□□ 0.42
CCNDBP1-203ENST00000562553 CXCL17Q6UXB2 119 aa17.7■□□□□ 0.42
CCNDBP1-203ENST00000562553 VSIG10LQ86VR7 867 aa17.7■□□□□ 0.42
CCNDBP1-203ENST00000562553 PHKBQ93100 1093 aa17.7■□□□□ 0.42
CCNDBP1-203ENST00000562553 IL17RAQ96F46 866 aa17.7■□□□□ 0.42
CCNDBP1-203ENST00000562553 LTBP2Q14767 1821 aa17.7■□□□□ 0.42
CCNDBP1-203ENST00000562553 NKRFO15226 690 aaKnown RBP eCLIP17.69■□□□□ 0.42
CCNDBP1-203ENST00000562553 CCND2P30279 289 aa17.69■□□□□ 0.42
CCNDBP1-203ENST00000562553 NAPAP54920 295 aa17.69■□□□□ 0.42
CCNDBP1-203ENST00000562553 C1orf53Q5VUE5 145 aa17.69■□□□□ 0.42
CCNDBP1-203ENST00000562553 GLT1D1Q96MS3 346 aa17.69■□□□□ 0.42
CCNDBP1-203ENST00000562553 SCN10AQ9Y5Y9 1956 aa17.68■□□□□ 0.42
CCNDBP1-203ENST00000562553 MRPS9P82933 396 aaKnown RBP17.68■□□□□ 0.42
CCNDBP1-203ENST00000562553 TLE2Q04725 743 aa17.68■□□□□ 0.42
CCNDBP1-203ENST00000562553 STK3Q13188 491 aa17.68■□□□□ 0.42
CCNDBP1-203ENST00000562553 PKN1Q16512 942 aa17.68■□□□□ 0.42
CCNDBP1-203ENST00000562553 PFKFB3Q16875 520 aaPredicted RBP17.68■□□□□ 0.42
CCNDBP1-203ENST00000562553 PPP1R18Q6NYC8 613 aa17.68■□□□□ 0.42
CCNDBP1-203ENST00000562553 ZNF274Q96GC6 653 aaPredicted RBP17.68■□□□□ 0.42
CCNDBP1-203ENST00000562553 BARHL2Q9NY43 387 aa17.68■□□□□ 0.42
CCNDBP1-203ENST00000562553 DDX41Q9UJV9 622 aaKnown RBP17.68■□□□□ 0.42
CCNDBP1-203ENST00000562553 ELP1O95163 1332 aa17.68■□□□□ 0.42
CCNDBP1-203ENST00000562553 hCG_1984214I3L0E3 225 aa17.67■□□□□ 0.42
CCNDBP1-203ENST00000562553 PRPF3O43395 683 aaKnown RBP17.67■□□□□ 0.42
CCNDBP1-203ENST00000562553 EIF5BO60841 1220 aaKnown RBP17.67■□□□□ 0.42
CCNDBP1-203ENST00000562553 SCG2P13521 617 aa17.67■□□□□ 0.42
CCNDBP1-203ENST00000562553 IFNAR1P17181 557 aa17.67■□□□□ 0.42
CCNDBP1-203ENST00000562553 ARHGAP1Q07960 439 aa17.67■□□□□ 0.42
CCNDBP1-203ENST00000562553 GPR153Q6NV75 609 aa17.67■□□□□ 0.42
CCNDBP1-203ENST00000562553 ZNF713Q8N859 430 aaPredicted RBP17.67■□□□□ 0.42
CCNDBP1-203ENST00000562553 VTI1AQ96AJ9 217 aa17.67■□□□□ 0.42
CCNDBP1-203ENST00000562553 SLC26A6Q9BXS9 759 aa17.67■□□□□ 0.42
CCNDBP1-203ENST00000562553 RIC8AQ9NPQ8 531 aa17.67■□□□□ 0.42
CCNDBP1-203ENST00000562553 PDLIM7Q9NR12 457 aa17.67■□□□□ 0.42
CCNDBP1-203ENST00000562553 MRVI1Q9Y6F6 885 aa17.67■□□□□ 0.42
CCNDBP1-203ENST00000562553 A0A0U1RQG5 324 aaPredicted RBP17.66■□□□□ 0.42
CCNDBP1-203ENST00000562553 SOX1O00570 391 aaPredicted RBP17.66■□□□□ 0.42
CCNDBP1-203ENST00000562553 ZEB2O60315 1214 aa17.66■□□□□ 0.42
CCNDBP1-203ENST00000562553 PQBP1O60828 265 aaKnown RBP17.66■□□□□ 0.42
CCNDBP1-203ENST00000562553 GH1P01241 217 aa17.66■□□□□ 0.42
CCNDBP1-203ENST00000562553 MAGEA10P43363 369 aaPredicted RBP17.66■□□□□ 0.42
CCNDBP1-203ENST00000562553 CPT1AP50416 773 aa17.66■□□□□ 0.42
CCNDBP1-203ENST00000562553 ADCY7P51828 1080 aa17.66■□□□□ 0.42
CCNDBP1-203ENST00000562553 AK2P54819 239 aa17.66■□□□□ 0.42
CCNDBP1-203ENST00000562553 PSMC6P62333 389 aa17.66■□□□□ 0.42
CCNDBP1-203ENST00000562553 SH3RF1Q7Z6J0 888 aa17.66■□□□□ 0.42
CCNDBP1-203ENST00000562553 RNF26Q9BY78 433 aaPredicted RBP17.66■□□□□ 0.42
CCNDBP1-203ENST00000562553 ALDH8A1Q9H2A2 487 aaPredicted RBP17.66■□□□□ 0.42
CCNDBP1-203ENST00000562553 RTEL1Q9NZ71 1219 aa17.66■□□□□ 0.42
CCNDBP1-203ENST00000562553 TPCN1Q9ULQ1 816 aa17.66■□□□□ 0.42
CCNDBP1-203ENST00000562553 PCDHA6Q9UN73 950 aa17.66■□□□□ 0.42
CCNDBP1-203ENST00000562553 PCDHA8Q9Y5H6 950 aa17.66■□□□□ 0.42
CCNDBP1-203ENST00000562553 GRIN2DO15399 1336 aa17.66■□□□□ 0.42
CCNDBP1-203ENST00000562553 SMCO2A6NFE2 343 aa17.65■□□□□ 0.42
CCNDBP1-203ENST00000562553 A6NJR5 290 aa17.65■□□□□ 0.42
CCNDBP1-203ENST00000562553 ARVCFO00192 962 aa17.65■□□□□ 0.42
CCNDBP1-203ENST00000562553 ADAMTS3O15072 1205 aa17.65■□□□□ 0.42
CCNDBP1-203ENST00000562553 SORBS3O60504 671 aa17.65■□□□□ 0.42
CCNDBP1-203ENST00000562553 MYL3P08590 195 aa17.65■□□□□ 0.42
CCNDBP1-203ENST00000562553 CDK7P50613 346 aa17.65■□□□□ 0.42
CCNDBP1-203ENST00000562553 PURAQ00577 322 aaKnown RBP17.65■□□□□ 0.42
CCNDBP1-203ENST00000562553 SP2Q02086 613 aa17.65■□□□□ 0.42
CCNDBP1-203ENST00000562553 SEMA3FQ13275 785 aa17.65■□□□□ 0.42
CCNDBP1-203ENST00000562553 LRIT3Q3SXY7 679 aa17.65■□□□□ 0.42
CCNDBP1-203ENST00000562553 PCNX4Q63HM2 1172 aa17.65■□□□□ 0.42
CCNDBP1-203ENST00000562553 AFG1LQ8WV93 481 aa17.65■□□□□ 0.42
CCNDBP1-203ENST00000562553 PGBD1Q96JS3 809 aa17.65■□□□□ 0.42
CCNDBP1-203ENST00000562553 INPP4AQ96PE3 977 aaPredicted RBP17.65■□□□□ 0.42
CCNDBP1-203ENST00000562553 PRDM5Q9NQX1 630 aaPredicted RBP17.65■□□□□ 0.42
CCNDBP1-203ENST00000562553 TRIM43BA6NCK2 446 aa17.64■□□□□ 0.41
CCNDBP1-203ENST00000562553 SPDYE3A6NKU9 549 aa17.64■□□□□ 0.41
CCNDBP1-203ENST00000562553 CABYRO75952 493 aa17.64■□□□□ 0.41
CCNDBP1-203ENST00000562553 MMP3P08254 477 aa17.64■□□□□ 0.41
CCNDBP1-203ENST00000562553 UBA1P22314 1058 aaKnown RBP17.64■□□□□ 0.41
CCNDBP1-203ENST00000562553 AKAP17AQ02040 695 aaKnown RBP17.64■□□□□ 0.41
CCNDBP1-203ENST00000562553 SCRN1Q12765 414 aa17.64■□□□□ 0.41
CCNDBP1-203ENST00000562553 ANKRD33Q7Z3H0 272 aa17.64■□□□□ 0.41
CCNDBP1-203ENST00000562553 TDHQ8IZJ6 230 aa17.64■□□□□ 0.41
CCNDBP1-203ENST00000562553 TRIM43Q96BQ3 446 aaPredicted RBP17.64■□□□□ 0.41
CCNDBP1-203ENST00000562553 LRCH3Q96II8 777 aa17.64■□□□□ 0.41
CCNDBP1-203ENST00000562553 BCAS3Q9H6U6 928 aa17.64■□□□□ 0.41
CCNDBP1-203ENST00000562553 POLR3EQ9NVU0 708 aa17.64■□□□□ 0.41
CCNDBP1-203ENST00000562553 TMEM260Q9NX78 707 aa17.64■□□□□ 0.41
CCNDBP1-203ENST00000562553 DTNBO60941 627 aa17.63■□□□□ 0.41
CCNDBP1-203ENST00000562553 LARGE1O95461 756 aa17.63■□□□□ 0.41
CCNDBP1-203ENST00000562553 GGPS1O95749 300 aa17.63■□□□□ 0.41
CCNDBP1-203ENST00000562553 CLTBP09497 229 aa17.63■□□□□ 0.41
CCNDBP1-203ENST00000562553 CLK2P49760 499 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms