RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 SCFD2Q8WU76 684 aa18.69■□□□□ 0.58
USB1-204ENST00000561568 DEFB118Q96PH6 123 aa18.69■□□□□ 0.58
USB1-204ENST00000561568 GJB4Q9NTQ9 266 aa18.69■□□□□ 0.58
USB1-204ENST00000561568 DDX49Q9Y6V7 483 aaKnown RBP18.69■□□□□ 0.58
USB1-204ENST00000561568 M0R2N6 131 aa18.68■□□□□ 0.58
USB1-204ENST00000561568 MAFGO15525 162 aa18.68■□□□□ 0.58
USB1-204ENST00000561568 DUSP11O75319 330 aaKnown RBP18.68■□□□□ 0.58
USB1-204ENST00000561568 TFRCP02786 760 aaKnown RBP18.68■□□□□ 0.58
USB1-204ENST00000561568 RARBP10826 455 aa18.68■□□□□ 0.58
USB1-204ENST00000561568 KRT2P35908 639 aa18.68■□□□□ 0.58
USB1-204ENST00000561568 SREBF1P36956 1147 aa18.68■□□□□ 0.58
USB1-204ENST00000561568 GJA8P48165 433 aa18.68■□□□□ 0.58
USB1-204ENST00000561568 USP11P51784 963 aa18.68■□□□□ 0.58
USB1-204ENST00000561568 MRPS9P82933 396 aaKnown RBP18.68■□□□□ 0.58
USB1-204ENST00000561568 TTLL4Q14679 1199 aa18.68■□□□□ 0.58
USB1-204ENST00000561568 GNPTABQ3T906 1256 aa18.68■□□□□ 0.58
USB1-204ENST00000561568 LHX8Q68G74 356 aa18.68■□□□□ 0.58
USB1-204ENST00000561568 SEPT14Q6ZU15 432 aa18.68■□□□□ 0.58
USB1-204ENST00000561568 KRT25Q7Z3Z0 450 aa18.68■□□□□ 0.58
USB1-204ENST00000561568 NLRX1Q86UT6 975 aa18.68■□□□□ 0.58
USB1-204ENST00000561568 WDR11Q9BZH6 1224 aa18.68■□□□□ 0.58
USB1-204ENST00000561568 PDGFCQ9NRA1 345 aa18.68■□□□□ 0.58
USB1-204ENST00000561568 RTEL1Q9NZ71 1219 aa18.68■□□□□ 0.58
USB1-204ENST00000561568 Q9Y3F1 56 aa18.68■□□□□ 0.58
USB1-204ENST00000561568 ADAMTS3O15072 1205 aa18.67■□□□□ 0.58
USB1-204ENST00000561568 NKRFO15226 690 aaKnown RBP eCLIP18.67■□□□□ 0.58
USB1-204ENST00000561568 CYP3A4P08684 503 aa18.67■□□□□ 0.58
USB1-204ENST00000561568 ZNF76P36508 570 aa18.67■□□□□ 0.58
USB1-204ENST00000561568 ADCYAP1R1P41586 468 aa18.67■□□□□ 0.58
USB1-204ENST00000561568 ARHGAP4P98171 946 aa18.67■□□□□ 0.58
USB1-204ENST00000561568 IL31RAQ8NI17 732 aa18.67■□□□□ 0.58
USB1-204ENST00000561568 U2AF1L4Q8WU68 220 aaKnown RBP18.67■□□□□ 0.58
USB1-204ENST00000561568 PGBD1Q96JS3 809 aa18.67■□□□□ 0.58
USB1-204ENST00000561568 INPP4AQ96PE3 977 aaPredicted RBP18.67■□□□□ 0.58
USB1-204ENST00000561568 RBBP6Q7Z6E9 1792 aaKnown RBP18.67■□□□□ 0.58
USB1-204ENST00000561568 CCDC194A0A1B0GVG4 234 aa18.66■□□□□ 0.58
USB1-204ENST00000561568 HSP90AA1P07900 732 aaKnown RBP18.66■□□□□ 0.58
USB1-204ENST00000561568 TXNP10599 105 aaKnown RBP18.66■□□□□ 0.58
USB1-204ENST00000561568 NONOQ15233 471 aaKnown RBP eCLIP18.66■□□□□ 0.58
USB1-204ENST00000561568 DUSP28Q4G0W2 176 aa18.66■□□□□ 0.58
USB1-204ENST00000561568 LARP1BQ659C4 914 aaKnown RBP18.66■□□□□ 0.58
USB1-204ENST00000561568 ARRDC4Q8NCT1 418 aa18.66■□□□□ 0.58
USB1-204ENST00000561568 RASGRP4Q8TDF6 673 aa18.66■□□□□ 0.58
USB1-204ENST00000561568 CDHR1Q96JP9 859 aa18.66■□□□□ 0.58
USB1-204ENST00000561568 CRISPLD2Q9H0B8 497 aa18.66■□□□□ 0.58
USB1-204ENST00000561568 SPC25Q9HBM1 224 aa18.66■□□□□ 0.58
USB1-204ENST00000561568 OGDHLQ9ULD0 1010 aa18.66■□□□□ 0.58
USB1-204ENST00000561568 LCTP09848 1927 aa18.66■□□□□ 0.58
USB1-204ENST00000561568 BTBD18B2RXH4 712 aa18.65■□□□□ 0.58
USB1-204ENST00000561568 SPATA31C2B4DYI2 1134 aa18.65■□□□□ 0.58
USB1-204ENST00000561568 RGS20O76081 388 aa18.65■□□□□ 0.58
USB1-204ENST00000561568 SMPD1P17405 629 aa18.65■□□□□ 0.58
USB1-204ENST00000561568 PDCP20941 246 aa18.65■□□□□ 0.58
USB1-204ENST00000561568 ICAM3P32942 547 aa18.65■□□□□ 0.58
USB1-204ENST00000561568 FOSBP53539 338 aa18.65■□□□□ 0.58
USB1-204ENST00000561568 BECN1Q14457 450 aa18.65■□□□□ 0.58
USB1-204ENST00000561568 CEP55Q53EZ4 464 aa18.65■□□□□ 0.58
USB1-204ENST00000561568 CCDC62Q6P9F0 684 aa18.65■□□□□ 0.58
USB1-204ENST00000561568 DIS3L2Q8IYB7 885 aaKnown RBP18.65■□□□□ 0.58
USB1-204ENST00000561568 OXER1Q8TDS5 423 aa18.65■□□□□ 0.58
USB1-204ENST00000561568 TBCKQ8TEA7 893 aa18.65■□□□□ 0.58
USB1-204ENST00000561568 CRYGNQ8WXF5 182 aa18.65■□□□□ 0.58
USB1-204ENST00000561568 GPRASP2Q96D09 838 aa18.65■□□□□ 0.58
USB1-204ENST00000561568 MXRA8Q9BRK3 442 aa18.65■□□□□ 0.58
USB1-204ENST00000561568 AP5M1Q9H0R1 490 aa18.65■□□□□ 0.58
USB1-204ENST00000561568 JADE2Q9NQC1 790 aa18.65■□□□□ 0.58
USB1-204ENST00000561568 DDX41Q9UJV9 622 aaKnown RBP18.65■□□□□ 0.58
USB1-204ENST00000561568 UBIAD1Q9Y5Z9 338 aa18.65■□□□□ 0.58
USB1-204ENST00000561568 MRVI1Q9Y6F6 885 aa18.65■□□□□ 0.58
USB1-204ENST00000561568 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.64■□□□□ 0.57
USB1-204ENST00000561568 H3BQV1 296 aa18.64■□□□□ 0.57
USB1-204ENST00000561568 FIBPO43427 364 aa18.64■□□□□ 0.57
USB1-204ENST00000561568 GUCY1B3Q02153 619 aa18.64■□□□□ 0.57
USB1-204ENST00000561568 IFFO2Q5TF58 517 aa18.64■□□□□ 0.57
USB1-204ENST00000561568 NIPA1Q7RTP0 329 aa18.64■□□□□ 0.57
USB1-204ENST00000561568 ZFP91Q96JP5 570 aaPredicted RBP18.64■□□□□ 0.57
USB1-204ENST00000561568 FOXP1Q9H334 677 aaPredicted RBP18.64■□□□□ 0.57
USB1-204ENST00000561568 XPNPEP3Q9NQH7 507 aa18.64■□□□□ 0.57
USB1-204ENST00000561568 GNEQ9Y223 722 aaKnown RBP18.64■□□□□ 0.57
USB1-204ENST00000561568 MEIS1O00470 390 aa18.63■□□□□ 0.57
USB1-204ENST00000561568 DYNC1LI2O43237 492 aaPredicted RBP18.63■□□□□ 0.57
USB1-204ENST00000561568 PDIA4P13667 645 aaKnown RBP18.63■□□□□ 0.57
USB1-204ENST00000561568 ITGB5P18084 799 aa18.63■□□□□ 0.57
USB1-204ENST00000561568 CIITAP33076 1130 aa18.63■□□□□ 0.57
USB1-204ENST00000561568 GJA9P57773 515 aa18.63■□□□□ 0.57
USB1-204ENST00000561568 GNL2Q13823 731 aaKnown RBP18.63■□□□□ 0.57
USB1-204ENST00000561568 ANO1Q5XXA6 986 aa18.63■□□□□ 0.57
USB1-204ENST00000561568 RNF180Q86T96 592 aa18.63■□□□□ 0.57
USB1-204ENST00000561568 ANKLE1Q8NAG6 615 aa18.63■□□□□ 0.57
USB1-204ENST00000561568 GIMAP8Q8ND71 665 aaPredicted RBP18.63■□□□□ 0.57
USB1-204ENST00000561568 NAP1L4Q99733 375 aaKnown RBP18.63■□□□□ 0.57
USB1-204ENST00000561568 SENP7Q9BQF6 1050 aa18.63■□□□□ 0.57
USB1-204ENST00000561568 MCM3APO60318 1980 aa18.62■□□□□ 0.57
USB1-204ENST00000561568 POTEFA5A3E0 1075 aa18.62■□□□□ 0.57
USB1-204ENST00000561568 NKX3-2P78367 333 aa18.62■□□□□ 0.57
USB1-204ENST00000561568 NR5A1Q13285 461 aa18.62■□□□□ 0.57
USB1-204ENST00000561568 MTMR1Q13613 665 aa18.62■□□□□ 0.57
USB1-204ENST00000561568 NEDD9Q14511 834 aa18.62■□□□□ 0.57
USB1-204ENST00000561568 LY6KQ17RY6 165 aa18.62■□□□□ 0.57
USB1-204ENST00000561568 PIK3AP1Q6ZUJ8 805 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms