RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 FAM126BQ8IXS8 530 aa17.86■□□□□ 0.45
CCDC113-203ENST00000561517 TDHQ8IZJ6 230 aa17.86■□□□□ 0.45
CCDC113-203ENST00000561517 CCDC82Q8N4S0 544 aa17.86■□□□□ 0.45
CCDC113-203ENST00000561517 IL31RAQ8NI17 732 aa17.86■□□□□ 0.45
CCDC113-203ENST00000561517 FAM217BQ9NTX9 383 aaPredicted RBP17.86■□□□□ 0.45
CCDC113-203ENST00000561517 DDX41Q9UJV9 622 aaKnown RBP17.86■□□□□ 0.45
CCDC113-203ENST00000561517 TBX21Q9UL17 535 aa17.86■□□□□ 0.45
CCDC113-203ENST00000561517 CNTNAP5Q8WYK1 1306 aa17.86■□□□□ 0.45
CCDC113-203ENST00000561517 MEIS2O14770 477 aa17.85■□□□□ 0.45
CCDC113-203ENST00000561517 GH1P01241 217 aa17.85■□□□□ 0.45
CCDC113-203ENST00000561517 CD4P01730 458 aa17.85■□□□□ 0.45
CCDC113-203ENST00000561517 MYCLP12524 364 aaPredicted RBP17.85■□□□□ 0.45
CCDC113-203ENST00000561517 ITGB8P26012 769 aa17.85■□□□□ 0.45
CCDC113-203ENST00000561517 ITGA7Q13683 1181 aa17.85■□□□□ 0.45
CCDC113-203ENST00000561517 LY6KQ17RY6 165 aa17.85■□□□□ 0.45
CCDC113-203ENST00000561517 BRDTQ58F21 947 aaPredicted RBP17.85■□□□□ 0.45
CCDC113-203ENST00000561517 Q6ZUG5 572 aa17.85■□□□□ 0.45
CCDC113-203ENST00000561517 BADQ92934 168 aa17.85■□□□□ 0.45
CCDC113-203ENST00000561517 TMEM39AQ9NV64 488 aa17.85■□□□□ 0.45
CCDC113-203ENST00000561517 hCG_1642624A0A1W2PR95 340 aa17.84■□□□□ 0.45
CCDC113-203ENST00000561517 GOLGA8AA7E2F4 631 aa17.84■□□□□ 0.45
CCDC113-203ENST00000561517 GOLGA8BA8MQT2 603 aa17.84■□□□□ 0.45
CCDC113-203ENST00000561517 KPNA6O60684 536 aa17.84■□□□□ 0.45
CCDC113-203ENST00000561517 CASTP20810 708 aaKnown RBP17.84■□□□□ 0.45
CCDC113-203ENST00000561517 CDC27P30260 824 aa17.84■□□□□ 0.45
CCDC113-203ENST00000561517 CCND2P30279 289 aa17.84■□□□□ 0.45
CCDC113-203ENST00000561517 FGD1P98174 961 aa17.84■□□□□ 0.45
CCDC113-203ENST00000561517 ARHGAP1Q07960 439 aa17.84■□□□□ 0.45
CCDC113-203ENST00000561517 USP17L6PQ6QN14 398 aa17.84■□□□□ 0.45
CCDC113-203ENST00000561517 BRF1Q92994 677 aa17.84■□□□□ 0.45
CCDC113-203ENST00000561517 CUL5Q93034 780 aa17.84■□□□□ 0.45
CCDC113-203ENST00000561517 EMID1Q96A84 441 aaPredicted RBP17.84■□□□□ 0.45
CCDC113-203ENST00000561517 DOCK5Q9H7D0 1870 aa17.84■□□□□ 0.45
CCDC113-203ENST00000561517 NID2Q14112 1375 aa17.83■□□□□ 0.45
CCDC113-203ENST00000561517 TLR3O15455 904 aaKnown RBP17.83■□□□□ 0.44
CCDC113-203ENST00000561517 MYL3P08590 195 aa17.83■□□□□ 0.44
CCDC113-203ENST00000561517 RAG1P15918 1043 aa17.83■□□□□ 0.44
CCDC113-203ENST00000561517 PSMC6P62333 389 aa17.83■□□□□ 0.44
CCDC113-203ENST00000561517 APOBRQ0VD83 1088 aa17.83■□□□□ 0.44
CCDC113-203ENST00000561517 LRIT3Q3SXY7 679 aa17.83■□□□□ 0.44
CCDC113-203ENST00000561517 KCNV1Q6PIU1 500 aa17.83■□□□□ 0.44
CCDC113-203ENST00000561517 SMARCC2Q8TAQ2 1214 aa17.83■□□□□ 0.44
CCDC113-203ENST00000561517 MTG1Q9BT17 334 aaPredicted RBP17.83■□□□□ 0.44
CCDC113-203ENST00000561517 PSTPIP2Q9H939 334 aa17.83■□□□□ 0.44
CCDC113-203ENST00000561517 MRVI1Q9Y6F6 885 aa17.83■□□□□ 0.44
CCDC113-203ENST00000561517 STAM2O75886 525 aa17.82■□□□□ 0.44
CCDC113-203ENST00000561517 TGFB3P10600 412 aa17.82■□□□□ 0.44
CCDC113-203ENST00000561517 MRPS9P82933 396 aaKnown RBP17.82■□□□□ 0.44
CCDC113-203ENST00000561517 AFG1LQ8WV93 481 aa17.82■□□□□ 0.44
CCDC113-203ENST00000561517 INPP4AQ96PE3 977 aaPredicted RBP17.82■□□□□ 0.44
CCDC113-203ENST00000561517 TM6SF1Q9BZW5 370 aa17.82■□□□□ 0.44
CCDC113-203ENST00000561517 ZSWIM6Q9HCJ5 1215 aa17.82■□□□□ 0.44
CCDC113-203ENST00000561517 TRIP12Q14669 1992 aaPredicted RBP17.82■□□□□ 0.44
CCDC113-203ENST00000561517 CCDC196A0A1B0GTZ2 297 aa17.81■□□□□ 0.44
CCDC113-203ENST00000561517 hCG_1984214I3L0E3 225 aa17.81■□□□□ 0.44
CCDC113-203ENST00000561517 SOX1O00570 391 aaPredicted RBP17.81■□□□□ 0.44
CCDC113-203ENST00000561517 TIMP1P01033 207 aa17.81■□□□□ 0.44
CCDC113-203ENST00000561517 MMP3P08254 477 aa17.81■□□□□ 0.44
CCDC113-203ENST00000561517 ADD1P35611 737 aaKnown RBP17.81■□□□□ 0.44
CCDC113-203ENST00000561517 METAP2P50579 478 aaKnown RBP eCLIP17.81■□□□□ 0.44
CCDC113-203ENST00000561517 EVCP57679 992 aa17.81■□□□□ 0.44
CCDC113-203ENST00000561517 LAMC2Q13753 1193 aa17.81■□□□□ 0.44
CCDC113-203ENST00000561517 WWC2Q6AWC2 1192 aa17.81■□□□□ 0.44
CCDC113-203ENST00000561517 XRRA1Q6P2D8 792 aa17.81■□□□□ 0.44
CCDC113-203ENST00000561517 RUFY3Q7L099 469 aa17.81■□□□□ 0.44
CCDC113-203ENST00000561517 HEATR3Q7Z4Q2 680 aa17.81■□□□□ 0.44
CCDC113-203ENST00000561517 TEX2Q8IWB9 1127 aa17.81■□□□□ 0.44
CCDC113-203ENST00000561517 ZNF713Q8N859 430 aaPredicted RBP17.81■□□□□ 0.44
CCDC113-203ENST00000561517 GPKOWQ92917 476 aaPredicted RBP eCLIP17.81■□□□□ 0.44
CCDC113-203ENST00000561517 V9GY48 417 aaPredicted RBP17.81■□□□□ 0.44
CCDC113-203ENST00000561517 ICAM3P32942 547 aa17.8■□□□□ 0.44
CCDC113-203ENST00000561517 MYSM1Q5VVJ2 828 aa17.8■□□□□ 0.44
CCDC113-203ENST00000561517 PCNX4Q63HM2 1172 aa17.8■□□□□ 0.44
CCDC113-203ENST00000561517 PPP1R18Q6NYC8 613 aa17.8■□□□□ 0.44
CCDC113-203ENST00000561517 PPTC7Q8NI37 304 aa17.8■□□□□ 0.44
CCDC113-203ENST00000561517 ZFP91Q96JP5 570 aaPredicted RBP17.8■□□□□ 0.44
CCDC113-203ENST00000561517 ALDH8A1Q9H2A2 487 aaPredicted RBP17.8■□□□□ 0.44
CCDC113-203ENST00000561517 NAP1L2Q9ULW6 460 aaPredicted RBP17.8■□□□□ 0.44
CCDC113-203ENST00000561517 LAMA3Q16787 3333 aa17.79■□□□□ 0.44
CCDC113-203ENST00000561517 B4GALT4O60513 344 aa17.79■□□□□ 0.44
CCDC113-203ENST00000561517 HOXD8P13378 290 aaPredicted RBP17.79■□□□□ 0.44
CCDC113-203ENST00000561517 UBA1P22314 1058 aaKnown RBP17.79■□□□□ 0.44
CCDC113-203ENST00000561517 SP2Q02086 613 aa17.79■□□□□ 0.44
CCDC113-203ENST00000561517 FPGSQ05932 587 aa17.79■□□□□ 0.44
CCDC113-203ENST00000561517 TOB2Q14106 344 aaPredicted RBP17.79■□□□□ 0.44
CCDC113-203ENST00000561517 DGKDQ16760 1214 aa17.79■□□□□ 0.44
CCDC113-203ENST00000561517 NBPF20Q3BBV1 942 aa17.79■□□□□ 0.44
CCDC113-203ENST00000561517 GNPTABQ3T906 1256 aa17.79■□□□□ 0.44
CCDC113-203ENST00000561517 CELF3Q5SZQ8 465 aaKnown RBP17.79■□□□□ 0.44
CCDC113-203ENST00000561517 MFSD5Q6N075 450 aa17.79■□□□□ 0.44
CCDC113-203ENST00000561517 TYW1BQ6NUM6 668 aa17.79■□□□□ 0.44
CCDC113-203ENST00000561517 NFRKBQ6P4R8 1299 aa17.79■□□□□ 0.44
CCDC113-203ENST00000561517 DHX37Q8IY37 1157 aaKnown RBP17.79■□□□□ 0.44
CCDC113-203ENST00000561517 TRPV6Q9H1D0 765 aa17.79■□□□□ 0.44
CCDC113-203ENST00000561517 CYP46A1Q9Y6A2 500 aa17.79■□□□□ 0.44
CCDC113-203ENST00000561517 KAT6AQ92794 2004 aa17.78■□□□□ 0.44
CCDC113-203ENST00000561517 SPATA31C2B4DYI2 1134 aa17.78■□□□□ 0.44
CCDC113-203ENST00000561517 STXBP3O00186 592 aa17.78■□□□□ 0.44
CCDC113-203ENST00000561517 GGPS1O95749 300 aa17.78■□□□□ 0.44
CCDC113-203ENST00000561517 NAPAP54920 295 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms