RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	TIGD5	Q53EQ6	642 aa		7.63	□□□□□ -1.19
TCF12-223	ENST00000561235	UBE2R2	Q712K3	238 aa	Predicted RBP	7.63	□□□□□ -1.19
TCF12-223	ENST00000561235	STRA8	Q7Z7C7	330 aa		7.63	□□□□□ -1.19
TCF12-223	ENST00000561235	PDZD8	Q8NEN9	1154 aa		7.63	□□□□□ -1.19
TCF12-223	ENST00000561235	TMEM169	Q96HH4	297 aa		7.63	□□□□□ -1.19
TCF12-223	ENST00000561235	C19orf44	Q9H6X5	657 aa		7.63	□□□□□ -1.19
TCF12-223	ENST00000561235	TAF6L	Q9Y6J9	622 aa		7.63	□□□□□ -1.19
TCF12-223	ENST00000561235		A0A1W2PQ27	194 aa		7.62	□□□□□ -1.19
TCF12-223	ENST00000561235		A0A1W2PQ64	194 aa		7.62	□□□□□ -1.19
TCF12-223	ENST00000561235		A0A1W2PQC6	194 aa		7.62	□□□□□ -1.19
TCF12-223	ENST00000561235		A0A1W2PQD8	194 aa		7.62	□□□□□ -1.19
TCF12-223	ENST00000561235		B4E1Z4	1266 aa		7.62	□□□□□ -1.19
TCF12-223	ENST00000561235	C22orf46	C9J442	243 aa		7.62	□□□□□ -1.19
TCF12-223	ENST00000561235	GLRX3	O76003	335 aa	Known RBP	7.62	□□□□□ -1.19
TCF12-223	ENST00000561235	APP	P05067	770 aa		7.62	□□□□□ -1.19
TCF12-223	ENST00000561235	RNASE1	P07998	156 aa	Known RBP	7.62	□□□□□ -1.19
TCF12-223	ENST00000561235	PYGM	P11217	842 aa		7.62	□□□□□ -1.19
TCF12-223	ENST00000561235	DNM2	P50570	870 aa		7.62	□□□□□ -1.19
TCF12-223	ENST00000561235	GTF2A2	P52657	109 aa		7.62	□□□□□ -1.19
TCF12-223	ENST00000561235	MVK	Q03426	396 aa		7.62	□□□□□ -1.19
TCF12-223	ENST00000561235	SKOR2	Q2VWA4	1001 aa	Predicted RBP	7.62	□□□□□ -1.19
TCF12-223	ENST00000561235	DDX53	Q86TM3	631 aa	Known RBP	7.62	□□□□□ -1.19
TCF12-223	ENST00000561235	AHI1	Q8N157	1196 aa		7.62	□□□□□ -1.19
TCF12-223	ENST00000561235	NUP43	Q8NFH3	380 aa		7.62	□□□□□ -1.19
TCF12-223	ENST00000561235	TRMT2B	Q96GJ1	504 aa	Known RBP	7.62	□□□□□ -1.19
TCF12-223	ENST00000561235	WNK4	Q96J92	1243 aa		7.62	□□□□□ -1.19
TCF12-223	ENST00000561235	MTA3	Q9BTC8	594 aa		7.62	□□□□□ -1.19
TCF12-223	ENST00000561235	SP110	Q9HB58	689 aa		7.62	□□□□□ -1.19
TCF12-223	ENST00000561235	CCDC66	A2RUB6	948 aa		7.61	□□□□□ -1.19
TCF12-223	ENST00000561235	FAM47E-STBD1	D6RA91	191 aa		7.61	□□□□□ -1.19
TCF12-223	ENST00000561235		M0R2C6	588 aa		7.61	□□□□□ -1.19
TCF12-223	ENST00000561235	NRDC	O43847	1150 aa		7.61	□□□□□ -1.19
TCF12-223	ENST00000561235	PSPN	O60542	156 aa		7.61	□□□□□ -1.19
TCF12-223	ENST00000561235	PRKCA	P17252	672 aa		7.61	□□□□□ -1.19
TCF12-223	ENST00000561235	GALK1	P51570	392 aa		7.61	□□□□□ -1.19
TCF12-223	ENST00000561235	NFKB2	Q00653	900 aa		7.61	□□□□□ -1.19
TCF12-223	ENST00000561235	CHRNE	Q04844	493 aa		7.61	□□□□□ -1.19
TCF12-223	ENST00000561235	GALNT18	Q6P9A2	607 aa		7.61	□□□□□ -1.19
TCF12-223	ENST00000561235	DDX46	Q7L014	1031 aa	Known RBP	7.61	□□□□□ -1.19
TCF12-223	ENST00000561235	SPPL2C	Q8IUH8	684 aa		7.61	□□□□□ -1.19
TCF12-223	ENST00000561235	RPUSD2	Q8IZ73	545 aa	Known RBP	7.61	□□□□□ -1.19
TCF12-223	ENST00000561235	OXR1	Q8N573	874 aa		7.61	□□□□□ -1.19
TCF12-223	ENST00000561235	CISD2	Q8N5K1	135 aa	Known RBP	7.61	□□□□□ -1.19
TCF12-223	ENST00000561235	PLEKHO2	Q8TD55	490 aa		7.61	□□□□□ -1.19
TCF12-223	ENST00000561235	USP33	Q8TEY7	942 aa		7.61	□□□□□ -1.19
TCF12-223	ENST00000561235	FBXW5	Q969U6	566 aa		7.61	□□□□□ -1.19
TCF12-223	ENST00000561235	ASIC4	Q96FT7	647 aa		7.61	□□□□□ -1.19
TCF12-223	ENST00000561235	CBLC	Q9ULV8	474 aa		7.61	□□□□□ -1.19
TCF12-223	ENST00000561235	SCO2	A0A1W2PP80	73 aa		7.6	□□□□□ -1.19
TCF12-223	ENST00000561235	FITM1	A5D6W6	292 aa		7.6	□□□□□ -1.19
TCF12-223	ENST00000561235	HPX	P02790	462 aa		7.6	□□□□□ -1.19
TCF12-223	ENST00000561235	GDNF	P39905	211 aa		7.6	□□□□□ -1.19
TCF12-223	ENST00000561235	EVA1C	P58658	441 aa		7.6	□□□□□ -1.19
TCF12-223	ENST00000561235	STRN3	Q13033	797 aa		7.6	□□□□□ -1.19
TCF12-223	ENST00000561235	ZNF792	Q3KQV3	632 aa		7.6	□□□□□ -1.19
TCF12-223	ENST00000561235	SIRT2	Q8IXJ6	389 aa		7.6	□□□□□ -1.19
TCF12-223	ENST00000561235	AFAP1L2	Q8N4X5	818 aa		7.6	□□□□□ -1.19
TCF12-223	ENST00000561235	LZTR1	Q8N653	840 aa		7.6	□□□□□ -1.19
TCF12-223	ENST00000561235	AGBL5	Q8NDL9	886 aa		7.6	□□□□□ -1.19
TCF12-223	ENST00000561235	NLGN2	Q8NFZ4	835 aa		7.6	□□□□□ -1.19
TCF12-223	ENST00000561235	CCDC120	Q96HB5	630 aa		7.6	□□□□□ -1.19
TCF12-223	ENST00000561235	CELF4	Q9BZC1	486 aa	Known RBP	7.6	□□□□□ -1.19
TCF12-223	ENST00000561235	CATSPERZ	Q9NTU4	200 aa		7.6	□□□□□ -1.19
TCF12-223	ENST00000561235	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	7.6	□□□□□ -1.19	2e-7	■■■■□ 22.8
TCF12-223	ENST00000561235	ACSL6	Q9UKU0	697 aa		7.6	□□□□□ -1.19
TCF12-223	ENST00000561235		H7BY64	318 aa		7.59	□□□□□ -1.19
TCF12-223	ENST00000561235	WNT9A	O14904	365 aa		7.59	□□□□□ -1.19
TCF12-223	ENST00000561235	HYAL3	O43820	417 aa	Predicted RBP	7.59	□□□□□ -1.19
TCF12-223	ENST00000561235	COL6A2	P12110	1019 aa		7.59	□□□□□ -1.19
TCF12-223	ENST00000561235	CDKN1C	P49918	316 aa	Predicted RBP	7.59	□□□□□ -1.19
TCF12-223	ENST00000561235	ST5	P78524	1137 aa		7.59	□□□□□ -1.19
TCF12-223	ENST00000561235	TMEM177	Q53S58	311 aa		7.59	□□□□□ -1.19
TCF12-223	ENST00000561235	FAM47C	Q5HY64	1035 aa		7.59	□□□□□ -1.19
TCF12-223	ENST00000561235	DDX42	Q86XP3	938 aa	Known RBP eCLIP	7.59	□□□□□ -1.19
TCF12-223	ENST00000561235		Q8N1Y9	231 aa		7.59	□□□□□ -1.19
TCF12-223	ENST00000561235	PDLIM7	Q9NR12	457 aa		7.59	□□□□□ -1.19
TCF12-223	ENST00000561235	GPR160	Q9UJ42	338 aa		7.59	□□□□□ -1.19
TCF12-223	ENST00000561235	CTNND2	Q9UQB3	1225 aa		7.59	□□□□□ -1.19
TCF12-223	ENST00000561235	ATP8A1	Q9Y2Q0	1164 aa		7.59	□□□□□ -1.19
TCF12-223	ENST00000561235		X6R8D5	127 aa		7.59	□□□□□ -1.19
TCF12-223	ENST00000561235	ZNF891	A8MT65	544 aa	Predicted RBP	7.58	□□□□□ -1.2
TCF12-223	ENST00000561235	CBX4	O00257	560 aa		7.58	□□□□□ -1.2
TCF12-223	ENST00000561235	CORO7	P57737	925 aa		7.58	□□□□□ -1.2
TCF12-223	ENST00000561235	NR0B2	Q15466	257 aa		7.58	□□□□□ -1.2
TCF12-223	ENST00000561235	C16orf59	Q7L2K0	433 aa		7.58	□□□□□ -1.2
TCF12-223	ENST00000561235	OVCH1	Q7RTY7	1134 aa		7.58	□□□□□ -1.2
TCF12-223	ENST00000561235	NXPE1	Q8N323	547 aa		7.58	□□□□□ -1.2
TCF12-223	ENST00000561235	PRPF38A	Q8NAV1	312 aa	Known RBP	7.58	□□□□□ -1.2
TCF12-223	ENST00000561235	RC3H2	Q9HBD1	1191 aa	Known RBP	7.58	□□□□□ -1.2
TCF12-223	ENST00000561235	TRAF5	O00463	557 aa		7.57	□□□□□ -1.2
TCF12-223	ENST00000561235	NPTXR	O95502	500 aa		7.57	□□□□□ -1.2
TCF12-223	ENST00000561235	NTRK1	P04629	796 aa		7.57	□□□□□ -1.2
TCF12-223	ENST00000561235	GNAT1	P11488	350 aa		7.57	□□□□□ -1.2
TCF12-223	ENST00000561235	PDE6A	P16499	860 aa		7.57	□□□□□ -1.2
TCF12-223	ENST00000561235	KRT15	P19012	456 aa		7.57	□□□□□ -1.2
TCF12-223	ENST00000561235	CDK11B	P21127	795 aa	Known RBP	7.57	□□□□□ -1.2
TCF12-223	ENST00000561235	CYP4F8	P98187	520 aa		7.57	□□□□□ -1.2
TCF12-223	ENST00000561235	LRP8	Q14114	963 aa		7.57	□□□□□ -1.2
TCF12-223	ENST00000561235	BICRAL	Q6AI39	1079 aa		7.57	□□□□□ -1.2
TCF12-223	ENST00000561235	NLRX1	Q86UT6	975 aa		7.57	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms