RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 C19orf57Q0VDD7 668 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 PAK1Q13153 545 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 PRKG1Q13976 671 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 ZNF267Q14586 743 aaPredicted RBP2.39□□□□□ -2.03
RTF1-207ENST00000561076 PLCB4Q15147 1175 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 TAF11Q15544 211 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 CRY1Q16526 586 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 ALDH1L2Q3SY69 923 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 TMEM177Q53S58 311 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 WDR45BQ5MNZ6 344 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 PLA2G2CQ5R387 149 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 DACT2Q5SW24 774 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 VPS53Q5VIR6 699 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 BROXQ5VW32 411 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 SLC6A19Q695T7 634 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 GTF2IRD2BQ6EKJ0 949 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 GDF6Q6KF10 455 aaPredicted RBP2.39□□□□□ -2.03
RTF1-207ENST00000561076 FAM180BQ6P0A1 224 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 GGT6Q6P531 493 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 ADAMTSL4Q6UY14 1074 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 CHST15Q7LFX5 561 aaPredicted RBP2.39□□□□□ -2.03
RTF1-207ENST00000561076 KRT77Q7Z794 578 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 ANKRD23Q86SG2 305 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 GTF2IRD2Q86UP8 949 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 FAM35AQ86V20 835 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 ZSCAN30Q86W11 494 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 PTRH1Q86Y79 214 aaKnown RBP2.39□□□□□ -2.03
RTF1-207ENST00000561076 DENND1CQ8IV53 801 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 SLC41A1Q8IVJ1 513 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 PPIL6Q8IXY8 311 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 SYTL1Q8IYJ3 562 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 C7orf61Q8IZ16 206 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 TTC30BQ8N4P2 665 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 FAM156AQ8NDB6 213 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 ATXN2LQ8WWM7 1075 aaKnown RBP2.39□□□□□ -2.03
RTF1-207ENST00000561076 ATRIPQ8WXE1 791 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 RUBCNQ92622 972 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 BRF1Q92994 677 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 USP13Q92995 863 aaPredicted RBP2.39□□□□□ -2.03
RTF1-207ENST00000561076 ZBTB10Q96DT7 871 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 C1GALT1C1Q96EU7 318 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 SCLYQ96I15 445 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 RCC1LQ96I51 464 aaKnown RBP2.39□□□□□ -2.03
RTF1-207ENST00000561076 CHAMP1Q96JM3 812 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 TMEM87BQ96K49 555 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 SGCZQ96LD1 299 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 RIPOR3Q96MK2 946 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 ZDHHC15Q96MV8 337 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 TAAR9Q96RI9 348 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 ZFYVE21Q9BQ24 234 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 APOL5Q9BWW9 433 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 LGR4Q9BXB1 951 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 NAA15Q9BXJ9 866 aaKnown RBP2.39□□□□□ -2.03
RTF1-207ENST00000561076 USP26Q9BXU7 913 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 WNT10AQ9GZT5 417 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 NOL6Q9H6R4 1146 aaKnown RBP2.39□□□□□ -2.03
RTF1-207ENST00000561076 BRD9Q9H8M2 597 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 SP110Q9HB58 689 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 AGO4Q9HCK5 861 aaKnown RBP2.39□□□□□ -2.03
RTF1-207ENST00000561076 KMT5AQ9NQR1 393 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 CATSPERZQ9NTU4 200 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 B4GALT6Q9UBX8 382 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 APEX2Q9UBZ4 518 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 PGAP2Q9UHJ9 254 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 PPP1R9AQ9ULJ8 1098 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 DNM3Q9UQ16 869 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 DIS3Q9Y2L1 958 aaKnown RBP2.39□□□□□ -2.03
RTF1-207ENST00000561076 EMC9Q9Y3B6 208 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 PCDHGB3Q9Y5G1 929 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 PCDHA8Q9Y5H6 950 aa2.39□□□□□ -2.03
RTF1-207ENST00000561076 GOLGA6L6A8MZA4 724 aa2.38□□□□□ -2.03
RTF1-207ENST00000561076 FOXN3O00409 490 aaPredicted RBP2.38□□□□□ -2.03
RTF1-207ENST00000561076 CAPN5O15484 640 aaPredicted RBP2.38□□□□□ -2.03
RTF1-207ENST00000561076 TBX1O43435 398 aa2.38□□□□□ -2.03
RTF1-207ENST00000561076 DHX16O60231 1041 aaKnown RBP2.38□□□□□ -2.03
RTF1-207ENST00000561076 TMCC2O75069 709 aa2.38□□□□□ -2.03
RTF1-207ENST00000561076 TIPRLO75663 272 aa2.38□□□□□ -2.03
RTF1-207ENST00000561076 RPLP2P05387 115 aaKnown RBP2.38□□□□□ -2.03
RTF1-207ENST00000561076 SRGNP10124 158 aa2.38□□□□□ -2.03
RTF1-207ENST00000561076 MAPTP10636 758 aaKnown RBP2.38□□□□□ -2.03
RTF1-207ENST00000561076 MYCLP12524 364 aaPredicted RBP2.38□□□□□ -2.03
RTF1-207ENST00000561076 MTHFD2P13995 350 aa2.38□□□□□ -2.03
RTF1-207ENST00000561076 ATP2A2P16615 1042 aaKnown RBP2.38□□□□□ -2.03
RTF1-207ENST00000561076 ABCB4P21439 1286 aa2.38□□□□□ -2.03
RTF1-207ENST00000561076 MAOBP27338 520 aa2.38□□□□□ -2.03
RTF1-207ENST00000561076 ATICP31939 592 aa2.38□□□□□ -2.03
RTF1-207ENST00000561076 CTNNA1P35221 906 aaKnown RBP2.38□□□□□ -2.03
RTF1-207ENST00000561076 PPM1AP35813 382 aa2.38□□□□□ -2.03
RTF1-207ENST00000561076 SLC19A1P41440 591 aa2.38□□□□□ -2.03
RTF1-207ENST00000561076 ALDH5A1P51649 535 aaPredicted RBP2.38□□□□□ -2.03
RTF1-207ENST00000561076 GFRA1P56159 465 aa2.38□□□□□ -2.03
RTF1-207ENST00000561076 ERVK-21P61565 698 aa2.38□□□□□ -2.03
RTF1-207ENST00000561076 PIP4K2BP78356 416 aa2.38□□□□□ -2.03
RTF1-207ENST00000561076 GPSM2P81274 684 aa2.38□□□□□ -2.03
RTF1-207ENST00000561076 HTRA3P83110 453 aa2.38□□□□□ -2.03
RTF1-207ENST00000561076 PLIN5Q00G26 463 aa2.38□□□□□ -2.03
RTF1-207ENST00000561076 POU4F1Q01851 419 aa2.38□□□□□ -2.03
RTF1-207ENST00000561076 DSG1Q02413 1049 aa2.38□□□□□ -2.03
RTF1-207ENST00000561076 CALD1Q05682 793 aaKnown RBP2.38□□□□□ -2.03
RTF1-207ENST00000561076 AUHQ13825 339 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms