RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 REXO1Q8N1G1 1221 aaKnown RBP11.03□□□□□ -0.64
RABGGTA-221ENST00000561055 ANKLE1Q8NAG6 615 aa11.03□□□□□ -0.64
RABGGTA-221ENST00000561055 INPP4AQ96PE3 977 aaPredicted RBP11.03□□□□□ -0.64
RABGGTA-221ENST00000561055 DEFB118Q96PH6 123 aa11.03□□□□□ -0.64
RABGGTA-221ENST00000561055 ALG1Q9BT22 464 aa11.03□□□□□ -0.64
RABGGTA-221ENST00000561055 EHMT1Q9H9B1 1298 aa11.03□□□□□ -0.64
RABGGTA-221ENST00000561055 PCDHA4Q9UN74 947 aa11.03□□□□□ -0.64
RABGGTA-221ENST00000561055 GNEQ9Y223 722 aaKnown RBP11.03□□□□□ -0.64
RABGGTA-221ENST00000561055 ADAMTS3O15072 1205 aa11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 NKRFO15226 690 aaKnown RBP eCLIP11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 ADCY6O43306 1168 aa11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 CYP3A4P08684 503 aa11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 CNGA1P29973 690 aa11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 CCND2P30279 289 aa11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 ICAM3P32942 547 aa11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 SREBF1P36956 1147 aa11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 RGS19P49795 217 aa11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 GJA9P57773 515 aa11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 DUSP28Q4G0W2 176 aa11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 KCNV1Q6PIU1 500 aa11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 UBE2Q1Q7Z7E8 422 aa11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 FBXO16Q8IX29 292 aaPredicted RBP11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 BLIDQ8IZY5 108 aa11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 IL31RAQ8NI17 732 aa11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 SCFD2Q8WU76 684 aa11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 UPF3AQ9H1J1 476 aaKnown RBP11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 PDGFCQ9NRA1 345 aa11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 ZHX1Q9UKY1 873 aaPredicted RBP11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 DDX49Q9Y6V7 483 aaKnown RBP11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 SCN10AQ9Y5Y9 1956 aa11.02□□□□□ -0.65
RABGGTA-221ENST00000561055 MAFGO15525 162 aa11.01□□□□□ -0.65
RABGGTA-221ENST00000561055 ADAMTS4O75173 837 aa11.01□□□□□ -0.65
RABGGTA-221ENST00000561055 RARBP10826 455 aa11.01□□□□□ -0.65
RABGGTA-221ENST00000561055 MYCLP12524 364 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-221ENST00000561055 CST5P28325 142 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-221ENST00000561055 ADCYAP1R1P41586 468 aa11.01□□□□□ -0.65
RABGGTA-221ENST00000561055 MNX1P50219 401 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-221ENST00000561055 USP11P51784 963 aa11.01□□□□□ -0.65
RABGGTA-221ENST00000561055 MLLT1Q03111 559 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-221ENST00000561055 TNFAIP2Q03169 654 aa11.01□□□□□ -0.65
RABGGTA-221ENST00000561055 TTLL4Q14679 1199 aa11.01□□□□□ -0.65
RABGGTA-221ENST00000561055 EEPD1Q7L9B9 569 aa11.01□□□□□ -0.65
RABGGTA-221ENST00000561055 ARRDC4Q8NCT1 418 aa11.01□□□□□ -0.65
RABGGTA-221ENST00000561055 INTS4Q96HW7 963 aaKnown RBP11.01□□□□□ -0.65
RABGGTA-221ENST00000561055 ANO3Q9BYT9 981 aa11.01□□□□□ -0.65
RABGGTA-221ENST00000561055 WDR11Q9BZH6 1224 aa11.01□□□□□ -0.65
RABGGTA-221ENST00000561055 TMEM260Q9NX78 707 aa11.01□□□□□ -0.65
RABGGTA-221ENST00000561055 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-221ENST00000561055 UBIAD1Q9Y5Z9 338 aa11.01□□□□□ -0.65
RABGGTA-221ENST00000561055 MYH15Q9Y2K3 1946 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 C11orf97A0A1B0GVM6 126 aaPredicted RBP11□□□□□ -0.65
RABGGTA-221ENST00000561055 SPATA31C2B4DYI2 1134 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 K7ELQ4 463 aaPredicted RBP11□□□□□ -0.65
RABGGTA-221ENST00000561055 CTAGE5O15320 804 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 EDIL3O43854 480 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 DTNBO60941 627 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 MYCP01106 439 aaPredicted RBP11□□□□□ -0.65
RABGGTA-221ENST00000561055 TFRCP02786 760 aaKnown RBP11□□□□□ -0.65
RABGGTA-221ENST00000561055 MMP1P03956 469 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 SMPD1P17405 629 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 EN2P19622 333 aaPredicted RBP11□□□□□ -0.65
RABGGTA-221ENST00000561055 CIITAP33076 1130 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 GNPTABQ3T906 1256 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 JAKMIP3Q5VZ66 844 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 KRT40Q6A162 431 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 CCSAPQ6IQ19 270 aaPredicted RBP11□□□□□ -0.65
RABGGTA-221ENST00000561055 NIPA1Q7RTP0 329 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 KLHDC9Q8NEP7 349 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 FBXO18Q8NFZ0 1043 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 TNFRSF25Q93038 417 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 EMID1Q96A84 441 aaPredicted RBP11□□□□□ -0.65
RABGGTA-221ENST00000561055 GPRASP2Q96D09 838 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 XPNPEP3Q9NQH7 507 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 GJB4Q9NTQ9 266 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 DDX41Q9UJV9 622 aaKnown RBP11□□□□□ -0.65
RABGGTA-221ENST00000561055 KCNJ14Q9UNX9 436 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 KIF3AQ9Y496 699 aa11□□□□□ -0.65
RABGGTA-221ENST00000561055 TRIP12Q14669 1992 aaPredicted RBP10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 DNM1LO00429 736 aa10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 MEIS1O00470 390 aa10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 FIBPO43427 364 aa10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 ARIH2O95376 493 aa10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 TXNP10599 105 aaKnown RBP10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 ITGB5P18084 799 aa10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 ARHGAP4P98171 946 aa10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 SEMA3FQ13275 785 aa10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 LRRC41Q15345 812 aa10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 MOXD1Q6UVY6 613 aa10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 SEPT14Q6ZU15 432 aa10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 KRT25Q7Z3Z0 450 aa10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 RNF180Q86T96 592 aa10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 NLRX1Q86UT6 975 aa10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 FAM184AQ8NB25 1140 aa10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 RASGRP4Q8TDF6 673 aa10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 CDHR1Q96JP9 859 aa10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 SENP7Q9BQF6 1050 aa10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 MXRA8Q9BRK3 442 aa10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 TSEN34Q9BSV6 310 aaKnown RBP10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 JADE2Q9NQC1 790 aa10.99□□□□□ -0.65
RABGGTA-221ENST00000561055 SYNRGQ9UMZ2 1314 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms