RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 ATG2AQ2TAZ0 1938 aa11.37□□□□□ -0.59
HERC1-210ENST00000560897 RBM47A0AV96 593 aaKnown RBP11.36□□□□□ -0.59
HERC1-210ENST00000560897 ICAM3P32942 547 aa11.36□□□□□ -0.59
HERC1-210ENST00000560897 PTK7Q13308 1070 aa11.36□□□□□ -0.59
HERC1-210ENST00000560897 PTPN21Q16825 1174 aa11.36□□□□□ -0.59
HERC1-210ENST00000560897 AACSQ86V21 672 aa11.36□□□□□ -0.59
HERC1-210ENST00000560897 GMCL1P1Q8NEA9 526 aa11.36□□□□□ -0.59
HERC1-210ENST00000560897 DBF4BQ8NFT6 615 aa11.36□□□□□ -0.59
HERC1-210ENST00000560897 DHX38Q92620 1227 aaKnown RBP11.36□□□□□ -0.59
HERC1-210ENST00000560897 EAF2Q96CJ1 260 aaPredicted RBP11.36□□□□□ -0.59
HERC1-210ENST00000560897 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.36□□□□□ -0.59
HERC1-210ENST00000560897 KATNAL1Q9BW62 490 aa11.36□□□□□ -0.59
HERC1-210ENST00000560897 IFIH1Q9BYX4 1025 aaKnown RBP11.36□□□□□ -0.59
HERC1-210ENST00000560897 CCPG1Q9ULG6 757 aa11.36□□□□□ -0.59
HERC1-210ENST00000560897 SYNPO2Q9UMS6 1093 aa11.36□□□□□ -0.59
HERC1-210ENST00000560897 LCTP09848 1927 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 PTPDC1A2A3K4 754 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 ZNF316A6NFI3 1004 aaPredicted RBP11.35□□□□□ -0.59
HERC1-210ENST00000560897 B4DLN1 442 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 GOLIM4O00461 696 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 LINC01565O15544 149 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 TTLL1O95922 423 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 TXNP10599 105 aaKnown RBP11.35□□□□□ -0.59
HERC1-210ENST00000560897 CASTP20810 708 aaKnown RBP11.35□□□□□ -0.59
HERC1-210ENST00000560897 GTF2F1P35269 517 aaKnown RBP eCLIP11.35□□□□□ -0.59
HERC1-210ENST00000560897 SLC1A4P43007 532 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 MRPL12P52815 198 aaKnown RBP11.35□□□□□ -0.59
HERC1-210ENST00000560897 RRP1P56182 461 aaKnown RBP11.35□□□□□ -0.59
HERC1-210ENST00000560897 POLA2Q14181 598 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 PUM1Q14671 1186 aaKnown RBP eCLIP11.35□□□□□ -0.59
HERC1-210ENST00000560897 MUM1L1Q5H9M0 696 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 ZNF618Q5T7W0 954 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 FAM9BQ8IZU0 186 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 STK11IPQ8N1F8 1099 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 SMRP1Q8NCR6 262 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 KCNG4Q8TDN1 519 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 STAG1Q8WVM7 1258 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 SEPT8Q92599 483 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 COPS5Q92905 334 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 RMDN1Q96DB5 314 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 PURBQ96QR8 312 aaKnown RBP11.35□□□□□ -0.59
HERC1-210ENST00000560897 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.35□□□□□ -0.597e-7■■■■□ 24.2
HERC1-210ENST00000560897 ZNF287Q9HBT7 754 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 GTF2IRD1Q9UHL9 959 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 SLC4A4Q9Y6R1 1079 aa11.35□□□□□ -0.59
HERC1-210ENST00000560897 TCRBV5S4A2TA0A5A2 114 aa11.34□□□□□ -0.59
HERC1-210ENST00000560897 C5orf67F2Z3F1 127 aa11.34□□□□□ -0.59
HERC1-210ENST00000560897 GRM6O15303 877 aa11.34□□□□□ -0.59
HERC1-210ENST00000560897 PDGFBP01127 241 aaPredicted RBP11.34□□□□□ -0.59
HERC1-210ENST00000560897 MMP1P03956 469 aa11.34□□□□□ -0.59
HERC1-210ENST00000560897 CT47B1P0C2W7 299 aaPredicted RBP11.34□□□□□ -0.59
HERC1-210ENST00000560897 RASA1P20936 1047 aa11.34□□□□□ -0.59
HERC1-210ENST00000560897 COASYQ13057 564 aa11.34□□□□□ -0.59
HERC1-210ENST00000560897 ADAM15Q13444 863 aa11.34□□□□□ -0.59
HERC1-210ENST00000560897 BAATQ14032 418 aaPredicted RBP11.34□□□□□ -0.59
HERC1-210ENST00000560897 CTR9Q6PD62 1173 aa11.34□□□□□ -0.59
HERC1-210ENST00000560897 DHX37Q8IY37 1157 aaKnown RBP11.34□□□□□ -0.59
HERC1-210ENST00000560897 ZNF444Q8N0Y2 327 aaPredicted RBP11.34□□□□□ -0.59
HERC1-210ENST00000560897 TOP1MTQ969P6 601 aa11.34□□□□□ -0.59
HERC1-210ENST00000560897 IL17RAQ96F46 866 aa11.34□□□□□ -0.59
HERC1-210ENST00000560897 MSLNLQ96KJ4 702 aa11.34□□□□□ -0.59
HERC1-210ENST00000560897 CTAGE1Q96RT6 745 aa11.34□□□□□ -0.59
HERC1-210ENST00000560897 HINFPQ9BQA5 517 aa11.34□□□□□ -0.59
HERC1-210ENST00000560897 ALG1Q9BT22 464 aa11.34□□□□□ -0.59
HERC1-210ENST00000560897 USP15Q9Y4E8 981 aaPredicted RBP11.34□□□□□ -0.59
HERC1-210ENST00000560897 NCOR2Q9Y618 2525 aa11.34□□□□□ -0.59
HERC1-210ENST00000560897 RSPH10B2B2RC85 870 aa11.33□□□□□ -0.6
HERC1-210ENST00000560897 BCAR3O75815 825 aa11.33□□□□□ -0.6
HERC1-210ENST00000560897 MMP3P08254 477 aa11.33□□□□□ -0.6
HERC1-210ENST00000560897 RSPH10BP0C881 870 aa11.33□□□□□ -0.6
HERC1-210ENST00000560897 CALML3P27482 149 aa11.33□□□□□ -0.6
HERC1-210ENST00000560897 BMPR1AP36894 532 aa11.33□□□□□ -0.6
HERC1-210ENST00000560897 THPOP40225 353 aa11.33□□□□□ -0.6
HERC1-210ENST00000560897 SSH3Q8TE77 659 aa11.33□□□□□ -0.6
HERC1-210ENST00000560897 AFG1LQ8WV93 481 aa11.33□□□□□ -0.6
HERC1-210ENST00000560897 ARHGAP45Q92619 1136 aa11.33□□□□□ -0.6
HERC1-210ENST00000560897 MKL1Q969V6 931 aa11.33□□□□□ -0.6
HERC1-210ENST00000560897 CEP95Q96GE4 821 aa11.33□□□□□ -0.6
HERC1-210ENST00000560897 MFSD1Q9H3U5 465 aa11.33□□□□□ -0.6
HERC1-210ENST00000560897 HDAC6Q9UBN7 1215 aa11.33□□□□□ -0.6
HERC1-210ENST00000560897 MINDY4BA8MYZ0 360 aa11.32□□□□□ -0.6
HERC1-210ENST00000560897 GH1P01241 217 aa11.32□□□□□ -0.6
HERC1-210ENST00000560897 ATF7P17544 494 aaPredicted RBP11.32□□□□□ -0.6
HERC1-210ENST00000560897 SLFN5Q08AF3 891 aa11.32□□□□□ -0.6
HERC1-210ENST00000560897 MTMR3Q13615 1198 aa11.32□□□□□ -0.6
HERC1-210ENST00000560897 MBTPS1Q14703 1052 aa11.32□□□□□ -0.6
HERC1-210ENST00000560897 DGKDQ16760 1214 aa11.32□□□□□ -0.6
HERC1-210ENST00000560897 PLEKHG4Q58EX7 1191 aa11.32□□□□□ -0.6
HERC1-210ENST00000560897 ERC1Q8IUD2 1116 aa11.32□□□□□ -0.6
HERC1-210ENST00000560897 EFHBQ8N7U6 833 aa11.32□□□□□ -0.6
HERC1-210ENST00000560897 TMEM105Q8N8V8 129 aa11.32□□□□□ -0.6
HERC1-210ENST00000560897 CHMP4CQ96CF2 233 aa11.32□□□□□ -0.6
HERC1-210ENST00000560897 MTMR4Q9NYA4 1195 aa11.32□□□□□ -0.6
HERC1-210ENST00000560897 EP300Q09472 2414 aaPredicted RBP11.32□□□□□ -0.6
HERC1-210ENST00000560897 VPS13AQ96RL7 3174 aa11.32□□□□□ -0.6
HERC1-210ENST00000560897 ZBED9Q6R2W3 1325 aa11.32□□□□□ -0.6
HERC1-210ENST00000560897 ACACBO00763 2458 aa11.31□□□□□ -0.6
HERC1-210ENST00000560897 DNAH14Q0VDD8 3507 aa11.31□□□□□ -0.6
HERC1-210ENST00000560897 IPO8O15397 1037 aaKnown RBP11.31□□□□□ -0.6
HERC1-210ENST00000560897 ICAM1P05362 532 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms