RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 FAM221BA6H8Z2 402 aa6.83□□□□□ -1.32
PSMA4-221ENST00000560842 ADCY3O60266 1144 aa6.83□□□□□ -1.32
PSMA4-221ENST00000560842 TBC1D8O95759 1140 aa6.83□□□□□ -1.32
PSMA4-221ENST00000560842 GFRA1P56159 465 aa6.83□□□□□ -1.32
PSMA4-221ENST00000560842 MVKQ03426 396 aa6.83□□□□□ -1.32
PSMA4-221ENST00000560842 SCRN1Q12765 414 aa6.83□□□□□ -1.32
PSMA4-221ENST00000560842 SPATC1Q76KD6 591 aa6.83□□□□□ -1.32
PSMA4-221ENST00000560842 LRRC47Q8N1G4 583 aaKnown RBP6.83□□□□□ -1.32
PSMA4-221ENST00000560842 SLC16A11Q8NCK7 471 aa6.83□□□□□ -1.32
PSMA4-221ENST00000560842 C1orf159Q96HA4 380 aa6.83□□□□□ -1.32
PSMA4-221ENST00000560842 JMJD8Q96S16 334 aa6.83□□□□□ -1.32
PSMA4-221ENST00000560842 RBM15Q96T37 977 aaKnown RBP eCLIP6.83□□□□□ -1.32
PSMA4-221ENST00000560842 MMP19Q99542 508 aa6.83□□□□□ -1.32
PSMA4-221ENST00000560842 ARHGEF4Q9NR80 690 aa6.83□□□□□ -1.32
PSMA4-221ENST00000560842 SMPD4Q9NXE4 827 aa6.83□□□□□ -1.32
PSMA4-221ENST00000560842 LRP2BPQ9P2M1 347 aa6.83□□□□□ -1.32
PSMA4-221ENST00000560842 SRRDQ9UH36 339 aa6.83□□□□□ -1.32
PSMA4-221ENST00000560842 DUSP10Q9Y6W6 482 aa6.83□□□□□ -1.32
PSMA4-221ENST00000560842 TRBV23OR9-2A0A075B6M9 112 aa6.82□□□□□ -1.32
PSMA4-221ENST00000560842 C1QTNF3-AMACRE9PGA6 284 aa6.82□□□□□ -1.32
PSMA4-221ENST00000560842 CPP00450 1065 aa6.82□□□□□ -1.32
PSMA4-221ENST00000560842 FGFR1P11362 822 aa6.82□□□□□ -1.32
PSMA4-221ENST00000560842 ATF2P15336 505 aa6.82□□□□□ -1.32
PSMA4-221ENST00000560842 GRIA2P42262 883 aa6.82□□□□□ -1.32
PSMA4-221ENST00000560842 SEPHS1P49903 392 aa6.82□□□□□ -1.32
PSMA4-221ENST00000560842 CORO7P57737 925 aa6.82□□□□□ -1.32
PSMA4-221ENST00000560842 HSP90AA2PQ14568 343 aaPredicted RBP6.82□□□□□ -1.32
PSMA4-221ENST00000560842 SLC35F1Q5T1Q4 408 aa6.82□□□□□ -1.32
PSMA4-221ENST00000560842 PMFBP1Q8TBY8 1022 aa6.82□□□□□ -1.32
PSMA4-221ENST00000560842 ZNF526Q8TF50 670 aaPredicted RBP6.82□□□□□ -1.32
PSMA4-221ENST00000560842 FRS2Q8WU20 508 aa6.82□□□□□ -1.32
PSMA4-221ENST00000560842 PPP1R14AQ96A00 147 aa6.82□□□□□ -1.32
PSMA4-221ENST00000560842 SPATA9Q9BWV2 254 aa6.82□□□□□ -1.32
PSMA4-221ENST00000560842 LNPKQ9C0E8 428 aa6.82□□□□□ -1.32
PSMA4-221ENST00000560842 PMF1-BGLAPU3KQ54 211 aa6.82□□□□□ -1.32
PSMA4-221ENST00000560842 ARNTLO00327 626 aa6.81□□□□□ -1.32
PSMA4-221ENST00000560842 NOBOXO60393 691 aa6.81□□□□□ -1.32
PSMA4-221ENST00000560842 FSHBP01225 129 aa6.81□□□□□ -1.32
PSMA4-221ENST00000560842 THBDP07204 575 aa6.81□□□□□ -1.32
PSMA4-221ENST00000560842 CNR2P34972 360 aa6.81□□□□□ -1.32
PSMA4-221ENST00000560842 DLX2Q07687 328 aaPredicted RBP6.81□□□□□ -1.32
PSMA4-221ENST00000560842 MAP4K2Q12851 820 aa6.81□□□□□ -1.32
PSMA4-221ENST00000560842 SF1Q15637 639 aaKnown RBP6.81□□□□□ -1.32
PSMA4-221ENST00000560842 LONRF2Q1L5Z9 754 aa6.81□□□□□ -1.32
PSMA4-221ENST00000560842 MTERF2Q49AM1 385 aa6.81□□□□□ -1.32
PSMA4-221ENST00000560842 ACBD5Q5T8D3 534 aaPredicted RBP6.81□□□□□ -1.32
PSMA4-221ENST00000560842 CPZQ66K79 652 aa6.81□□□□□ -1.32
PSMA4-221ENST00000560842 E4F1Q66K89 784 aaPredicted RBP6.81□□□□□ -1.32
PSMA4-221ENST00000560842 PAQR3Q6TCH7 311 aa6.81□□□□□ -1.32
PSMA4-221ENST00000560842 NAT16Q8N8M0 369 aa6.81□□□□□ -1.32
PSMA4-221ENST00000560842 SRGAP3O43295 1099 aa6.8□□□□□ -1.32
PSMA4-221ENST00000560842 CYBBP04839 570 aa6.8□□□□□ -1.32
PSMA4-221ENST00000560842 PAMP19021 973 aa6.8□□□□□ -1.32
PSMA4-221ENST00000560842 RBM10P98175 930 aaKnown RBP6.8□□□□□ -1.32
PSMA4-221ENST00000560842 NFE2L2Q16236 605 aa6.8□□□□□ -1.32
PSMA4-221ENST00000560842 DDX1Q92499 740 aaKnown RBP6.8□□□□□ -1.32
PSMA4-221ENST00000560842 SORCS2Q96PQ0 1159 aa6.8□□□□□ -1.32
PSMA4-221ENST00000560842 SRPK1Q96SB4 655 aaKnown RBP6.8□□□□□ -1.32
PSMA4-221ENST00000560842 AARSD1Q9BTE6 412 aaKnown RBP6.8□□□□□ -1.32
PSMA4-221ENST00000560842 C1QTNF3Q9BXJ4 246 aa6.8□□□□□ -1.32
PSMA4-221ENST00000560842 KRTAP3-1Q9BYR8 98 aa6.8□□□□□ -1.32
PSMA4-221ENST00000560842 GPRC5CQ9NQ84 441 aa6.8□□□□□ -1.32
PSMA4-221ENST00000560842 CDK11AQ9UQ88 783 aaPredicted RBP6.8□□□□□ -1.32
PSMA4-221ENST00000560842 NPFFR2Q9Y5X5 522 aa6.8□□□□□ -1.32
PSMA4-221ENST00000560842 A0A1W2PQ27 194 aa6.79□□□□□ -1.32
PSMA4-221ENST00000560842 A0A1W2PQ64 194 aa6.79□□□□□ -1.32
PSMA4-221ENST00000560842 A0A1W2PQC6 194 aa6.79□□□□□ -1.32
PSMA4-221ENST00000560842 A0A1W2PQD8 194 aa6.79□□□□□ -1.32
PSMA4-221ENST00000560842 DIAPH1O60610 1272 aaKnown RBP6.79□□□□□ -1.32
PSMA4-221ENST00000560842 SNRPB2P08579 225 aaKnown RBP6.79□□□□□ -1.32
PSMA4-221ENST00000560842 DBHP09172 617 aa6.79□□□□□ -1.32
PSMA4-221ENST00000560842 PLS3P13797 630 aa6.79□□□□□ -1.32
PSMA4-221ENST00000560842 L1CAMP32004 1257 aa6.79□□□□□ -1.32
PSMA4-221ENST00000560842 CCDC144BQ3MJ40 725 aa6.79□□□□□ -1.32
PSMA4-221ENST00000560842 IQCEQ6IPM2 695 aa6.79□□□□□ -1.32
PSMA4-221ENST00000560842 DENND5AQ6IQ26 1287 aa6.79□□□□□ -1.32
PSMA4-221ENST00000560842 ZBTB38Q8NAP3 1195 aaPredicted RBP6.79□□□□□ -1.32
PSMA4-221ENST00000560842 TMEM145Q8NBT3 493 aa6.79□□□□□ -1.32
PSMA4-221ENST00000560842 OSBP2Q969R2 916 aa6.79□□□□□ -1.32
PSMA4-221ENST00000560842 RNF38Q9H0F5 515 aa6.79□□□□□ -1.32
PSMA4-221ENST00000560842 PLA2G2DQ9UNK4 145 aa6.79□□□□□ -1.32
PSMA4-221ENST00000560842 HCFC2Q9Y5Z7 792 aa6.79□□□□□ -1.32
PSMA4-221ENST00000560842 TRAV20A0A0B4J274 112 aa6.78□□□□□ -1.32
PSMA4-221ENST00000560842 NPHP3-ACAD11A0A0J9YXS1 232 aa6.78□□□□□ -1.32
PSMA4-221ENST00000560842 OVOL3O00110 214 aa6.78□□□□□ -1.32
PSMA4-221ENST00000560842 DLX3O60479 287 aa6.78□□□□□ -1.32
PSMA4-221ENST00000560842 KRTAP1-1Q07627 177 aa6.78□□□□□ -1.32
PSMA4-221ENST00000560842 SSRP1Q08945 709 aaKnown RBP6.78□□□□□ -1.32
PSMA4-221ENST00000560842 DPH6Q7L8W6 267 aa6.78□□□□□ -1.32
PSMA4-221ENST00000560842 CARFQ8N187 725 aa6.78□□□□□ -1.32
PSMA4-221ENST00000560842 DNAJC7Q99615 494 aa6.78□□□□□ -1.32
PSMA4-221ENST00000560842 CLEC1BQ9P126 229 aa6.78□□□□□ -1.32
PSMA4-221ENST00000560842 FAN1Q9Y2M0 1017 aa6.78□□□□□ -1.32
PSMA4-221ENST00000560842 C7orf72A4D263 438 aa6.77□□□□□ -1.33
PSMA4-221ENST00000560842 CCDC85CA6NKD9 419 aa6.77□□□□□ -1.33
PSMA4-221ENST00000560842 PPP1R11O60927 126 aaPredicted RBP6.77□□□□□ -1.33
PSMA4-221ENST00000560842 PABPC1P11940 636 aaKnown RBP6.77□□□□□ -1.33
PSMA4-221ENST00000560842 IFRD2Q12894 506 aaPredicted RBP6.77□□□□□ -1.33
PSMA4-221ENST00000560842 ZC3H12BQ5HYM0 836 aaKnown RBP6.77□□□□□ -1.33
PSMA4-221ENST00000560842 MBLAC2Q68D91 279 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms