RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 ARVCFO00192 962 aa14.92□□□□□ -0.02
CTDSPL2-209ENST00000560620 SORBS3O60504 671 aa14.92□□□□□ -0.02
CTDSPL2-209ENST00000560620 EIF5BO60841 1220 aaKnown RBP14.92□□□□□ -0.02
CTDSPL2-209ENST00000560620 GH1P01241 217 aa14.92□□□□□ -0.02
CTDSPL2-209ENST00000560620 RAG1P15918 1043 aa14.92□□□□□ -0.02
CTDSPL2-209ENST00000560620 CDC27P30260 824 aa14.92□□□□□ -0.02
CTDSPL2-209ENST00000560620 RCAN1P53805 252 aa14.92□□□□□ -0.02
CTDSPL2-209ENST00000560620 PSMC6P62333 389 aa14.92□□□□□ -0.02
CTDSPL2-209ENST00000560620 NKX3-2P78367 333 aa14.92□□□□□ -0.02
CTDSPL2-209ENST00000560620 AKAP17AQ02040 695 aaKnown RBP14.92□□□□□ -0.02
CTDSPL2-209ENST00000560620 ITGA7Q13683 1181 aa14.92□□□□□ -0.02
CTDSPL2-209ENST00000560620 SH3RF1Q7Z6J0 888 aa14.92□□□□□ -0.02
CTDSPL2-209ENST00000560620 IL31RAQ8NI17 732 aa14.92□□□□□ -0.02
CTDSPL2-209ENST00000560620 GDF15Q99988 308 aa14.92□□□□□ -0.02
CTDSPL2-209ENST00000560620 ZSWIM6Q9HCJ5 1215 aa14.92□□□□□ -0.02
CTDSPL2-209ENST00000560620 RTEL1Q9NZ71 1219 aa14.92□□□□□ -0.02
CTDSPL2-209ENST00000560620 TRIM43BA6NCK2 446 aa14.91□□□□□ -0.02
CTDSPL2-209ENST00000560620 SPDYE3A6NKU9 549 aa14.91□□□□□ -0.02
CTDSPL2-209ENST00000560620 MEIS2O14770 477 aa14.91□□□□□ -0.02
CTDSPL2-209ENST00000560620 CCT2P78371 535 aaKnown RBP14.91□□□□□ -0.02
CTDSPL2-209ENST00000560620 UBE2SQ16763 222 aa14.91□□□□□ -0.02
CTDSPL2-209ENST00000560620 WWC2Q6AWC2 1192 aa14.91□□□□□ -0.02
CTDSPL2-209ENST00000560620 CCDC62Q6P9F0 684 aa14.91□□□□□ -0.02
CTDSPL2-209ENST00000560620 KCNV1Q6PIU1 500 aa14.91□□□□□ -0.02
CTDSPL2-209ENST00000560620 ANKRD33Q7Z3H0 272 aa14.91□□□□□ -0.02
CTDSPL2-209ENST00000560620 VSIG10LQ86VR7 867 aa14.91□□□□□ -0.02
CTDSPL2-209ENST00000560620 DHX37Q8IY37 1157 aaKnown RBP14.91□□□□□ -0.02
CTDSPL2-209ENST00000560620 AFG1LQ8WV93 481 aa14.91□□□□□ -0.02
CTDSPL2-209ENST00000560620 TRIM43Q96BQ3 446 aaPredicted RBP14.91□□□□□ -0.02
CTDSPL2-209ENST00000560620 TOX2Q96NM4 488 aa14.91□□□□□ -0.02
CTDSPL2-209ENST00000560620 PIK3CDO00329 1044 aa14.9□□□□□ -0.02
CTDSPL2-209ENST00000560620 KPNA6O60684 536 aa14.9□□□□□ -0.02
CTDSPL2-209ENST00000560620 PPFIA3O75145 1194 aa14.9□□□□□ -0.02
CTDSPL2-209ENST00000560620 PURAQ00577 322 aaKnown RBP14.9□□□□□ -0.02
CTDSPL2-209ENST00000560620 FAAP100Q0VG06 881 aa14.9□□□□□ -0.02
CTDSPL2-209ENST00000560620 GNPTABQ3T906 1256 aa14.9□□□□□ -0.02
CTDSPL2-209ENST00000560620 FAM47CQ5HY64 1035 aa14.9□□□□□ -0.02
CTDSPL2-209ENST00000560620 BADQ92934 168 aa14.9□□□□□ -0.02
CTDSPL2-209ENST00000560620 LARP6Q9BRS8 491 aaKnown RBP14.9□□□□□ -0.02
CTDSPL2-209ENST00000560620 MTG1Q9BT17 334 aaPredicted RBP14.9□□□□□ -0.02
CTDSPL2-209ENST00000560620 TM6SF1Q9BZW5 370 aa14.9□□□□□ -0.02
CTDSPL2-209ENST00000560620 EHMT1Q9H9B1 1298 aa14.9□□□□□ -0.02
CTDSPL2-209ENST00000560620 FAM217BQ9NTX9 383 aaPredicted RBP14.9□□□□□ -0.02
CTDSPL2-209ENST00000560620 PDRG1Q9NUG6 133 aa14.9□□□□□ -0.02
CTDSPL2-209ENST00000560620 DDX41Q9UJV9 622 aaKnown RBP14.9□□□□□ -0.02
CTDSPL2-209ENST00000560620 A6NJR5 290 aa14.89□□□□□ -0.03
CTDSPL2-209ENST00000560620 hCG_1984214I3L0E3 225 aa14.89□□□□□ -0.03
CTDSPL2-209ENST00000560620 CPLX1O14810 134 aa14.89□□□□□ -0.03
CTDSPL2-209ENST00000560620 PDIA3P30101 505 aaKnown RBP14.89□□□□□ -0.03
CTDSPL2-209ENST00000560620 BMP8BP34820 402 aa14.89□□□□□ -0.03
CTDSPL2-209ENST00000560620 CDK7P50613 346 aa14.89□□□□□ -0.03
CTDSPL2-209ENST00000560620 ADCY7P51828 1080 aa14.89□□□□□ -0.03
CTDSPL2-209ENST00000560620 FUT2Q10981 343 aa14.89□□□□□ -0.03
CTDSPL2-209ENST00000560620 STK3Q13188 491 aa14.89□□□□□ -0.03
CTDSPL2-209ENST00000560620 LAMC2Q13753 1193 aa14.89□□□□□ -0.03
CTDSPL2-209ENST00000560620 TOB2Q14106 344 aaPredicted RBP14.89□□□□□ -0.03
CTDSPL2-209ENST00000560620 FBXL16Q8N461 479 aa14.89□□□□□ -0.03
CTDSPL2-209ENST00000560620 ZNF713Q8N859 430 aaPredicted RBP14.89□□□□□ -0.03
CTDSPL2-209ENST00000560620 PHKBQ93100 1093 aa14.89□□□□□ -0.03
CTDSPL2-209ENST00000560620 AGXT2Q9BYV1 514 aa14.89□□□□□ -0.03
CTDSPL2-209ENST00000560620 MLXIPQ9HAP2 919 aa14.89□□□□□ -0.03
CTDSPL2-209ENST00000560620 NCOA5Q9HCD5 579 aaKnown RBP14.89□□□□□ -0.03
CTDSPL2-209ENST00000560620 A0A1W2PPC1 479 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 SMCO2A6NFE2 343 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 STXBP3O00186 592 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 STAM2O75886 525 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 RGS20O76081 388 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 GGPS1O95749 300 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 MMP3P08254 477 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 SCG2P13521 617 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 MRPS9P82933 396 aaKnown RBP14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 ARHGAP1Q07960 439 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 DGKDQ16760 1214 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 PCNX4Q63HM2 1172 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 PPP1R18Q6NYC8 613 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 NLRX1Q86UT6 975 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 FAM126BQ8IXS8 530 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 TDHQ8IZJ6 230 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 SPATA33Q96N06 139 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 SLC26A6Q9BXS9 759 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 SEZ6LQ9BYH1 1024 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 PPP1R12CQ9BZL4 782 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 PRO3102Q9H379 93 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 BARHL2Q9NY43 387 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 PCDHA6Q9UN73 950 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 PCDHA8Q9Y5H6 950 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 MYH7BA7E2Y1 1941 aa14.88□□□□□ -0.03
CTDSPL2-209ENST00000560620 NOP56O00567 594 aaKnown RBP14.87□□□□□ -0.03
CTDSPL2-209ENST00000560620 KIAA0355O15063 1070 aa14.87□□□□□ -0.03
CTDSPL2-209ENST00000560620 TGFB3P10600 412 aa14.87□□□□□ -0.03
CTDSPL2-209ENST00000560620 PFKFB3Q16875 520 aaPredicted RBP14.87□□□□□ -0.03
CTDSPL2-209ENST00000560620 NBPF20Q3BBV1 942 aa14.87□□□□□ -0.03
CTDSPL2-209ENST00000560620 XRRA1Q6P2D8 792 aa14.87□□□□□ -0.03
CTDSPL2-209ENST00000560620 CCDC12Q8WUD4 166 aaPredicted RBP14.87□□□□□ -0.03
CTDSPL2-209ENST00000560620 PPP1R13LQ8WUF5 828 aa14.87□□□□□ -0.03
CTDSPL2-209ENST00000560620 TRPV6Q9H1D0 765 aa14.87□□□□□ -0.03
CTDSPL2-209ENST00000560620 RIC8AQ9NPQ8 531 aa14.87□□□□□ -0.03
CTDSPL2-209ENST00000560620 NOD1Q9Y239 953 aa14.87□□□□□ -0.03
CTDSPL2-209ENST00000560620 FRMPD4Q14CM0 1322 aa14.87□□□□□ -0.03
CTDSPL2-209ENST00000560620 PRPF3O43395 683 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms