RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 SLFN13Q68D06 897 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 CENPPQ6IPU0 288 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 ZNF662Q6ZS27 426 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 IRF2BP1Q8IU81 584 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 ZNF397Q8NF99 534 aaPredicted RBP10.85□□□□□ -0.67
RTF1-206ENST00000560447 ZNF507Q8TCN5 953 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 RAD54LQ92698 747 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 COA7Q96BR5 231 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 CRISPLD2Q9H0B8 497 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 CPVLQ9H3G5 476 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 DNAJC18Q9H819 358 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 PSTPIP2Q9H939 334 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 DBNDD1Q9H9R9 158 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 ADGRG1Q9Y653 693 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 ATAD5Q96QE3 1844 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 A0A1W2PQJ5 194 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 EFCAB8A8MWE9 144 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 EEF2P13639 858 aaKnown RBP10.84□□□□□ -0.67
RTF1-206ENST00000560447 RXRBP28702 533 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 CDC25AP30304 524 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 CASQ1P31415 396 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 CASP14P31944 242 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 TXKP42681 527 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 SLC1A4P43007 532 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 CDK17Q00537 523 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 ICA1Q05084 483 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 NFIAQ12857 509 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 SLC15A2Q16348 729 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 TSR1Q2NL82 804 aaKnown RBP10.84□□□□□ -0.67
RTF1-206ENST00000560447 HSP90AA4PQ58FG1 418 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 ZSCAN29Q8IWY8 852 aaPredicted RBP10.84□□□□□ -0.67
RTF1-206ENST00000560447 RTKN2Q8IZC4 609 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 CSGALNACT2Q8N6G5 542 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 MB21D1Q8N884 522 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 PNMA5Q96PV4 448 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 ERGIC2Q96RQ1 377 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 PSMD1Q99460 953 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 AMNQ9BXJ7 453 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 EDEM3Q9BZQ6 932 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 ABHD10Q9NUJ1 306 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 BLOC1S4Q9NUP1 217 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 TMEM260Q9NX78 707 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 STK32BQ9NY57 414 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 TAB2Q9NYJ8 693 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 TMOD2Q9NZR1 351 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 DDX25Q9UHL0 483 aaKnown RBP10.84□□□□□ -0.67
RTF1-206ENST00000560447 ZNF215Q9UL58 517 aaPredicted RBP10.84□□□□□ -0.67
RTF1-206ENST00000560447 CAPN11Q9UMQ6 739 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 LHX6Q9UPM6 363 aa10.84□□□□□ -0.67
RTF1-206ENST00000560447 USP17L10C9JJH3 530 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 SLC37A4O43826 429 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 EDIL3O43854 480 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 KIF5CO60282 957 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 PLA2G6O60733 806 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 PPP1R11O60927 126 aaPredicted RBP10.83□□□□□ -0.68
RTF1-206ENST00000560447 TDP2O95551 362 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 TNNI2P48788 182 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 MAP3K9P80192 1104 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 UBXN1Q04323 297 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 EHHADHQ08426 723 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 ABCB5Q2M3G0 1257 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 QRICH1Q2TAL8 776 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 Q4G0T1 1027 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 RBM26Q5T8P6 1007 aaKnown RBP10.83□□□□□ -0.68
RTF1-206ENST00000560447 HAUS3Q68CZ6 603 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 KIAA0825Q8IV33 1275 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 OR8K1Q8NGG5 319 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 SNX29Q8TEQ0 813 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 CRYGNQ8WXF5 182 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 FAM20AQ96MK3 541 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 DNAJC7Q99615 494 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 DUSP9Q99956 384 aaKnown RBP10.83□□□□□ -0.68
RTF1-206ENST00000560447 TUBGCP2Q9BSJ2 902 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 ANO3Q9BYT9 981 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 VPS16Q9H269 839 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 KCNMB3Q9NPA1 279 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 ZNHIT6Q9NWK9 470 aaKnown RBP10.83□□□□□ -0.68
RTF1-206ENST00000560447 HDAC9Q9UKV0 1011 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 LUC7L2Q9Y383 392 aaKnown RBP10.83□□□□□ -0.68
RTF1-206ENST00000560447 PITPNM2Q9BZ72 1349 aa10.83□□□□□ -0.68
RTF1-206ENST00000560447 DDTLA6NHG4 134 aaPredicted RBP10.82□□□□□ -0.68
RTF1-206ENST00000560447 PIK3CDO00329 1044 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 TBC1D12O60347 775 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 GNA14O95837 355 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 CIITAP33076 1130 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 KRT9P35527 623 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 CCT6AP40227 531 aaKnown RBP10.82□□□□□ -0.68
RTF1-206ENST00000560447 FXR1P51114 621 aaKnown RBP eCLIP10.82□□□□□ -0.68
RTF1-206ENST00000560447 RBM5P52756 815 aaKnown RBP eCLIP10.82□□□□□ -0.68
RTF1-206ENST00000560447 GNG11P61952 73 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 CDC37Q16543 378 aaPredicted RBP10.82□□□□□ -0.68
RTF1-206ENST00000560447 MEA1Q16626 185 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 FKBP15Q5T1M5 1219 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 TTBK2Q6IQ55 1244 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 TOGARAM2Q6ZUX3 1019 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 SH3BP5LQ7L8J4 393 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 CCDC84Q86UT8 332 aaPredicted RBP10.82□□□□□ -0.68
RTF1-206ENST00000560447 CCDC170Q8IYT3 715 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 MTMR14Q8NCE2 650 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 MNS1Q8NEH6 495 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms