RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, human

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-222	ENST00000560131	ANKRD44	Q8N8A2	993 aa		6.11	□□□□□ -1.43
TPM1-222	ENST00000560131	ZNF507	Q8TCN5	953 aa		6.11	□□□□□ -1.43
TPM1-222	ENST00000560131	SMARCC1	Q92922	1105 aa	Predicted RBP	6.11	□□□□□ -1.43
TPM1-222	ENST00000560131	KIF1BP	Q96EK5	621 aa		6.11	□□□□□ -1.43
TPM1-222	ENST00000560131	CCDC74B	Q96LY2	380 aa		6.11	□□□□□ -1.43
TPM1-222	ENST00000560131	SLC6A18	Q96N87	628 aa		6.11	□□□□□ -1.43
TPM1-222	ENST00000560131	AARSD1	Q9BTE6	412 aa	Known RBP	6.11	□□□□□ -1.43
TPM1-222	ENST00000560131	KCNF1	Q9H3M0	494 aa		6.11	□□□□□ -1.43
TPM1-222	ENST00000560131	LRP2BP	Q9P2M1	347 aa		6.11	□□□□□ -1.43
TPM1-222	ENST00000560131	THRAP3	Q9Y2W1	955 aa	Known RBP	6.11	□□□□□ -1.43
TPM1-222	ENST00000560131	EID1	Q9Y6B2	187 aa		6.11	□□□□□ -1.43
TPM1-222	ENST00000560131	TULP4	Q9NRJ4	1543 aa		6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	ATP8B1	O43520	1251 aa		6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	VAMP4	O75379	141 aa		6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	MAP4K4	O95819	1239 aa	Predicted RBP	6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	ALB	P02768	609 aa		6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	TP53	P04637	393 aa	Predicted RBP	6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	ZNF853	P0CG23	659 aa		6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	U2AF1L5	P0DN76	240 aa	Predicted RBP	6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	PPP2R2A	P63151	447 aa		6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	U2AF1	Q01081	240 aa	Known RBP eCLIP	6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	ID3	Q02535	119 aa		6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	TRIM28	Q13263	835 aa	Known RBP	6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	DHX8	Q14562	1220 aa	Known RBP	6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	SETDB1	Q15047	1291 aa		6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	EXOSC6	Q5RKV6	272 aa	Known RBP	6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	HEATR6	Q6AI08	1181 aa	Known RBP	6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	CTR9	Q6PD62	1173 aa		6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	LRRTM3	Q86VH5	581 aa		6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	PPFIBP1	Q86W92	1011 aa		6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	RNF214	Q8ND24	703 aa		6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	LRRN4CL	Q8ND94	238 aa		6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	TSR2	Q969E8	191 aa	Known RBP	6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	ZNF830	Q96NB3	372 aa	Predicted RBP	6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	TTC12	Q9H892	705 aa	Predicted RBP	6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	C14orf93	Q9H972	538 aa	Known RBP	6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	MAGEC2	Q9UBF1	373 aa	Predicted RBP	6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	CHD2	O14647	1828 aa	Known RBP	6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	KIF20B	Q96Q89	1820 aa		6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	N4BP2	Q86UW6	1770 aa	Predicted RBP	6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	PIK3C2B	O00750	1634 aa		6.1	□□□□□ -1.43
TPM1-222	ENST00000560131	LRRC7	Q96NW7	1537 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	TCHH	Q07283	1943 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	ADGRL3	Q9HAR2	1447 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	KIAA0232	Q92628	1395 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	AOX1	Q06278	1338 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	CCDC194	A0A1B0GVG4	234 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	CLEC3A	O75596	197 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	UBOX5	O94941	541 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	DLGAP3	O95886	979 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	ITGAV	P06756	1048 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	EPHX1	P07099	455 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	FGFR1	P11362	822 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	CPE	P16870	476 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	SDS	P20132	328 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	CYP2C19	P33261	490 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	GNAI1	P63096	354 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	SUMO1	P63165	101 aa	Known RBP	6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	MAP7	Q14244	749 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	YOD1	Q5VVQ6	348 aa	Predicted RBP	6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	WWC2	Q6AWC2	1192 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	CNNM4	Q6P4Q7	775 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	DDX46	Q7L014	1031 aa	Known RBP	6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	AHI1	Q8N157	1196 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	AFAP1L2	Q8N4X5	818 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	GALNT11	Q8NCW6	608 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	CCDC112	Q8NEF3	446 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	ATL2	Q8NHH9	583 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	DDX1	Q92499	740 aa	Known RBP	6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	ERO1A	Q96HE7	468 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	HAUS7	Q99871	368 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	TARS2	Q9BW92	718 aa	Known RBP	6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	CRIM1	Q9NZV1	1036 aa		6.09	□□□□□ -1.43
TPM1-222	ENST00000560131	ITSN1	Q15811	1721 aa		6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	ELP1	O95163	1332 aa		6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	EVC2	Q86UK5	1308 aa		6.08	□□□□□ -1.44
TPM1-222	ENST00000560131		C9IYK1	514 aa		6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	FAM229A	H3BQW9	127 aa		6.08	□□□□□ -1.44
TPM1-222	ENST00000560131		M0R082	166 aa		6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	TMPRSS2	O15393	492 aa		6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	DDX3Y	O15523	660 aa	Known RBP	6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	CAPNS1	P04632	268 aa		6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	CCDC192	P0DO97	292 aa		6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	PABPC1	P11940	636 aa	Known RBP	6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	CD68	P34810	354 aa	Predicted RBP	6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	KCNJ4	P48050	445 aa		6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	KCNJ6	P48051	423 aa		6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	RBM6	P78332	1123 aa	Known RBP	6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	ANKRD39	Q53RE8	183 aa		6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	AXDND1	Q5T1B0	1012 aa	Predicted RBP	6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	TDRD10	Q5VZ19	366 aa	Known RBP	6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	NSMF	Q6X4W1	530 aa		6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	RBM43	Q6ZSC3	357 aa	Known RBP	6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	ILDR2	Q71H61	639 aa		6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	CDC37L1	Q7L3B6	337 aa		6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	TEX2	Q8IWB9	1127 aa		6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	CCAR1	Q8IX12	1150 aa	Known RBP	6.08	□□□□□ -1.44
TPM1-222	ENST00000560131	ZNF513	Q8N8E2	541 aa	Predicted RBP	6.08	□□□□□ -1.44

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