RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 MMP3P08254 477 aa15.14■□□□□ 0.01
RABGGTA-213ENST00000560127 IKBKEQ14164 716 aa15.14■□□□□ 0.01
RABGGTA-213ENST00000560127 MBTPS1Q14703 1052 aa15.14■□□□□ 0.01
RABGGTA-213ENST00000560127 COL19A1Q14993 1142 aa15.14■□□□□ 0.01
RABGGTA-213ENST00000560127 CCDC96Q2M329 555 aa15.14■□□□□ 0.01
RABGGTA-213ENST00000560127 PPP4R3BQ5MIZ7 849 aa15.14■□□□□ 0.01
RABGGTA-213ENST00000560127 BTNL9Q6UXG8 535 aa15.14■□□□□ 0.01
RABGGTA-213ENST00000560127 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.14■□□□□ 0.01
RABGGTA-213ENST00000560127 CRBNQ96SW2 442 aa15.14■□□□□ 0.01
RABGGTA-213ENST00000560127 INCENPQ9NQS7 918 aa15.14■□□□□ 0.01
RABGGTA-213ENST00000560127 PRKAG3Q9UGI9 489 aa15.14■□□□□ 0.01
RABGGTA-213ENST00000560127 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.14■□□□□ 0.01
RABGGTA-213ENST00000560127 INSL6Q9Y581 213 aa15.14■□□□□ 0.01
RABGGTA-213ENST00000560127 ZFYP08048 801 aaPredicted RBP15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 SLC3A2P08195 630 aaKnown RBP15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 NOVP48745 357 aa15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 RPS6P62753 249 aaKnown RBP15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 HTRA4P83105 476 aaPredicted RBP15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 MKRN4PQ13434 485 aaPredicted RBP15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 TRIM71Q2Q1W2 868 aaKnown RBP15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 TIGD5Q53EQ6 642 aa15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 SYDE2Q5VT97 1194 aa15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 CCDC62Q6P9F0 684 aa15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 SP7Q8TDD2 431 aaPredicted RBP15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 DCAF4Q8WV16 495 aa15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 WNT8BQ93098 351 aa15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 PABPC5Q96DU9 382 aaKnown RBP15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 SEC62Q99442 399 aaKnown RBP15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 NACAP1Q9BZK3 213 aa15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 LRRCC1Q9C099 1032 aa15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 GTF2IRD1Q9UHL9 959 aa15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 CTNNA3Q9UI47 895 aa15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 MYO15AQ9UKN7 3530 aa15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 CACNA1AO00555 2505 aa15.13■□□□□ 0.01
RABGGTA-213ENST00000560127 KAT6AQ92794 2004 aa15.12■□□□□ 0.01
RABGGTA-213ENST00000560127 KMT2EQ8IZD2 1858 aa15.12■□□□□ 0.01
RABGGTA-213ENST00000560127 TSPY2A6NKD2 308 aa15.12■□□□□ 0.01
RABGGTA-213ENST00000560127 ARHGAP1Q07960 439 aa15.12■□□□□ 0.01
RABGGTA-213ENST00000560127 PTPROQ16827 1216 aa15.12■□□□□ 0.01
RABGGTA-213ENST00000560127 EPC2Q52LR7 807 aa15.12■□□□□ 0.01
RABGGTA-213ENST00000560127 TCEAL5Q5H9L2 206 aa15.12■□□□□ 0.01
RABGGTA-213ENST00000560127 ADHFE1Q8IWW8 467 aa15.12■□□□□ 0.01
RABGGTA-213ENST00000560127 BANK1Q8NDB2 785 aa15.12■□□□□ 0.01
RABGGTA-213ENST00000560127 DNERQ8NFT8 737 aa15.12■□□□□ 0.01
RABGGTA-213ENST00000560127 MFSD14AQ96MC6 490 aa15.12■□□□□ 0.01
RABGGTA-213ENST00000560127 MPHOSPH6Q99547 160 aaKnown RBP15.12■□□□□ 0.01
RABGGTA-213ENST00000560127 NAPBQ9H115 298 aa15.12■□□□□ 0.01
RABGGTA-213ENST00000560127 HDAC6Q9UBN7 1215 aa15.12■□□□□ 0.01
RABGGTA-213ENST00000560127 VPS13AQ96RL7 3174 aa15.11■□□□□ 0.01
RABGGTA-213ENST00000560127 LGR5O75473 907 aa15.11■□□□□ 0.01
RABGGTA-213ENST00000560127 IRS1P35568 1242 aa15.11■□□□□ 0.01
RABGGTA-213ENST00000560127 LY6KQ17RY6 165 aa15.11■□□□□ 0.01
RABGGTA-213ENST00000560127 ZNF618Q5T7W0 954 aa15.11■□□□□ 0.01
RABGGTA-213ENST00000560127 TSHZ3Q63HK5 1081 aa15.11■□□□□ 0.01
RABGGTA-213ENST00000560127 EP400NLQ6ZTU2 488 aa15.11■□□□□ 0.01
RABGGTA-213ENST00000560127 FAM50BQ9Y247 325 aa15.11■□□□□ 0.01
RABGGTA-213ENST00000560127 FRMPD2Q68DX3 1309 aaPredicted RBP15.11■□□□□ 0.01
RABGGTA-213ENST00000560127 H3BNC9 293 aa15.1■□□□□ 0.01
RABGGTA-213ENST00000560127 GH1P01241 217 aa15.1■□□□□ 0.01
RABGGTA-213ENST00000560127 CASTP20810 708 aaKnown RBP15.1■□□□□ 0.01
RABGGTA-213ENST00000560127 LTBRP36941 435 aa15.1■□□□□ 0.01
RABGGTA-213ENST00000560127 CTDSPL2Q05D32 466 aa15.1■□□□□ 0.01
RABGGTA-213ENST00000560127 PTK7Q13308 1070 aa15.1■□□□□ 0.01
RABGGTA-213ENST00000560127 GPM6BQ13491 265 aa15.1■□□□□ 0.01
RABGGTA-213ENST00000560127 MYOCDQ8IZQ8 938 aa15.1■□□□□ 0.01
RABGGTA-213ENST00000560127 C7orf31Q8N865 590 aa15.1■□□□□ 0.01
RABGGTA-213ENST00000560127 PRSS33Q8NF86 280 aa15.1■□□□□ 0.01
RABGGTA-213ENST00000560127 UPF3BQ9BZI7 483 aaKnown RBP15.1■□□□□ 0.01
RABGGTA-213ENST00000560127 GPCPD1Q9NPB8 672 aa15.1■□□□□ 0.01
RABGGTA-213ENST00000560127 MUTYHQ9UIF7 546 aa15.1■□□□□ 0.01
RABGGTA-213ENST00000560127 COL4A6Q14031 1691 aa15.09■□□□□ 0.01
RABGGTA-213ENST00000560127 FOXP2O15409 715 aa15.09■□□□□ 0.01
RABGGTA-213ENST00000560127 AMHP03971 560 aa15.09■□□□□ 0.01
RABGGTA-213ENST00000560127 PSEN2P49810 448 aa15.09■□□□□ 0.01
RABGGTA-213ENST00000560127 ZNF200P98182 395 aaPredicted RBP15.09■□□□□ 0.01
RABGGTA-213ENST00000560127 HERC4Q5GLZ8 1057 aaPredicted RBP15.09■□□□□ 0.01
RABGGTA-213ENST00000560127 SEPT14Q6ZU15 432 aa15.09■□□□□ 0.01
RABGGTA-213ENST00000560127 CHST3Q7LGC8 479 aa15.09■□□□□ 0.01
RABGGTA-213ENST00000560127 DBF4BQ8NFT6 615 aa15.09■□□□□ 0.01
RABGGTA-213ENST00000560127 SAMD11Q96NU1 681 aa15.09■□□□□ 0.01
RABGGTA-213ENST00000560127 ALG1Q9BT22 464 aa15.09■□□□□ 0.01
RABGGTA-213ENST00000560127 NSUN3Q9H649 340 aaKnown RBP15.09■□□□□ 0.01
RABGGTA-213ENST00000560127 CLDND1Q9NY35 253 aa15.09■□□□□ 0.01
RABGGTA-213ENST00000560127 DDX19BQ9UMR2 479 aa15.09■□□□□ 0.01
RABGGTA-213ENST00000560127 DMDP11532 3685 aa15.09■□□□□ 0.01
RABGGTA-213ENST00000560127 B4DLN1 442 aa15.08■□□□□ 0
RABGGTA-213ENST00000560127 HAS3O00219 553 aa15.08■□□□□ 0
RABGGTA-213ENST00000560127 RANBP6O60518 1105 aaKnown RBP15.08■□□□□ 0
RABGGTA-213ENST00000560127 MRPL12P52815 198 aaKnown RBP15.08■□□□□ 0
RABGGTA-213ENST00000560127 HIC1Q14526 733 aa15.08■□□□□ 0
RABGGTA-213ENST00000560127 MFSD10Q14728 455 aa15.08■□□□□ 0
RABGGTA-213ENST00000560127 DGKDQ16760 1214 aa15.08■□□□□ 0
RABGGTA-213ENST00000560127 IER5LQ5T953 404 aa15.08■□□□□ 0
RABGGTA-213ENST00000560127 RPAINQ86UA6 219 aa15.08■□□□□ 0
RABGGTA-213ENST00000560127 TMEM192Q8IY95 271 aa15.08■□□□□ 0
RABGGTA-213ENST00000560127 TMEM47Q9BQJ4 181 aa15.08■□□□□ 0
RABGGTA-213ENST00000560127 PNMA2Q9UL42 364 aa15.08■□□□□ 0
RABGGTA-213ENST00000560127 WDR19Q8NEZ3 1342 aa15.08■□□□□ 0
RABGGTA-213ENST00000560127 F2P00734 622 aa15.07■□□□□ 0
RABGGTA-213ENST00000560127 ZNF286BP0CG31 522 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms